RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 CD1BP29016 333 aa5.72□□□□□ -1.49
BRCA1-214ENST00000477152 EPHA2P29317 976 aa5.72□□□□□ -1.49
BRCA1-214ENST00000477152 CDX1P47902 265 aaPredicted RBP5.72□□□□□ -1.49
BRCA1-214ENST00000477152 GNG10P50151 68 aa5.72□□□□□ -1.49
BRCA1-214ENST00000477152 KRTAP10-11P60412 298 aa5.72□□□□□ -1.49
BRCA1-214ENST00000477152 EBI3Q14213 229 aa5.72□□□□□ -1.49
BRCA1-214ENST00000477152 HNF4GQ14541 408 aa5.72□□□□□ -1.49
BRCA1-214ENST00000477152 KIR2DS1Q14954 304 aa5.72□□□□□ -1.49
BRCA1-214ENST00000477152 MPV17LQ2QL34 196 aa5.72□□□□□ -1.49
BRCA1-214ENST00000477152 C6orf183Q5T699 404 aa5.72□□□□□ -1.49
BRCA1-214ENST00000477152 TMEM65Q6PI78 240 aa5.72□□□□□ -1.49
BRCA1-214ENST00000477152 AMIGO2Q86SJ2 522 aa5.72□□□□□ -1.49
BRCA1-214ENST00000477152 IZUMO1Q8IYV9 350 aa5.72□□□□□ -1.49
BRCA1-214ENST00000477152 OR51A2Q8NGJ7 313 aa5.72□□□□□ -1.49
BRCA1-214ENST00000477152 MRGPRDQ8TDS7 321 aa5.72□□□□□ -1.49
BRCA1-214ENST00000477152 GPR148Q8TDV2 347 aa5.72□□□□□ -1.49
BRCA1-214ENST00000477152 CKLFQ9UBR5 152 aa5.72□□□□□ -1.49
BRCA1-214ENST00000477152 PSG11Q9UQ72 335 aa5.72□□□□□ -1.49
BRCA1-214ENST00000477152 EXOGQ9Y2C4 368 aaKnown RBP5.72□□□□□ -1.49
BRCA1-214ENST00000477152 IGHV1-3A0A0C4DH29 117 aa5.71□□□□□ -1.49
BRCA1-214ENST00000477152 IGKV1-12A0A0C4DH73 117 aa5.71□□□□□ -1.49
BRCA1-214ENST00000477152 A0A1W2PPI3 338 aa5.71□□□□□ -1.49
BRCA1-214ENST00000477152 OR4C45A6NMZ5 311 aa5.71□□□□□ -1.49
BRCA1-214ENST00000477152 SDCBPO00560 298 aaPredicted RBP5.71□□□□□ -1.49
BRCA1-214ENST00000477152 HSPB6O14558 160 aa5.71□□□□□ -1.49
BRCA1-214ENST00000477152 SPINT2O43291 252 aa5.71□□□□□ -1.49
BRCA1-214ENST00000477152 ORC5O43913 435 aa5.71□□□□□ -1.49
BRCA1-214ENST00000477152 IGKV1D-12P01611 117 aa5.71□□□□□ -1.49
BRCA1-214ENST00000477152 PPIFP30405 207 aaKnown RBP5.71□□□□□ -1.49
BRCA1-214ENST00000477152 GPR12P47775 334 aa5.71□□□□□ -1.49
BRCA1-214ENST00000477152 RAB40BQ12829 278 aa5.71□□□□□ -1.49
BRCA1-214ENST00000477152 LTC4SQ16873 150 aa5.71□□□□□ -1.49
BRCA1-214ENST00000477152 ZFP1Q6P2D0 407 aa5.71□□□□□ -1.49
BRCA1-214ENST00000477152 TMPRSS11AQ6ZMR5 421 aa5.71□□□□□ -1.49
BRCA1-214ENST00000477152 LINC00311Q8N616 119 aa5.71□□□□□ -1.49
BRCA1-214ENST00000477152 OR13A1Q8NGR1 328 aa5.71□□□□□ -1.49
BRCA1-214ENST00000477152 PELI1Q96FA3 418 aa5.71□□□□□ -1.49
BRCA1-214ENST00000477152 SPACA5Q96QH8 159 aa5.71□□□□□ -1.49
BRCA1-214ENST00000477152 P2RX4Q99571 388 aa5.71□□□□□ -1.49
BRCA1-214ENST00000477152 DPCDQ9BVM2 203 aaPredicted RBP5.71□□□□□ -1.49
BRCA1-214ENST00000477152 ABCG5Q9H222 651 aa5.71□□□□□ -1.49
BRCA1-214ENST00000477152 PPIL3Q9H2H8 161 aaKnown RBP5.71□□□□□ -1.49
BRCA1-214ENST00000477152 TMEM138Q9NPI0 162 aa5.71□□□□□ -1.49
BRCA1-214ENST00000477152 IL36GQ9NZH8 169 aa5.71□□□□□ -1.49
BRCA1-214ENST00000477152 DKK2Q9UBU2 259 aa5.71□□□□□ -1.49
BRCA1-214ENST00000477152 ING4Q9UNL4 249 aa5.71□□□□□ -1.49
BRCA1-214ENST00000477152 ST3GAL6Q9Y274 331 aa5.71□□□□□ -1.49
BRCA1-214ENST00000477152 RPL36Q9Y3U8 105 aaKnown RBP5.71□□□□□ -1.49
BRCA1-214ENST00000477152 GMPPBQ9Y5P6 360 aa5.71□□□□□ -1.49
BRCA1-214ENST00000477152 HMX3A6NHT5 357 aa5.71□□□□□ -1.5
BRCA1-214ENST00000477152 SH2D7A6NKC9 451 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-214ENST00000477152 SEC14L6B5MCN3 397 aa5.71□□□□□ -1.5
BRCA1-214ENST00000477152 MCRIP1C9JLW8 97 aa5.71□□□□□ -1.5
BRCA1-214ENST00000477152 OR7C1O76099 320 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-214ENST00000477152 OR8U8P0C7N1 319 aa5.71□□□□□ -1.5
BRCA1-214ENST00000477152 CGB3P0DN86 165 aa5.71□□□□□ -1.5
BRCA1-214ENST00000477152 CGB7P0DN87 165 aa5.71□□□□□ -1.5
BRCA1-214ENST00000477152 SOX6P35712 828 aa5.71□□□□□ -1.5
BRCA1-214ENST00000477152 NANOS3P60323 173 aaKnown RBP5.71□□□□□ -1.5
BRCA1-214ENST00000477152 ZP1P60852 638 aa5.71□□□□□ -1.5
BRCA1-214ENST00000477152 CDK5R1Q15078 307 aa5.71□□□□□ -1.5
BRCA1-214ENST00000477152 CCDC58Q4VC31 144 aa5.71□□□□□ -1.5
BRCA1-214ENST00000477152 NHLRC3Q5JS37 347 aa5.71□□□□□ -1.5
BRCA1-214ENST00000477152 ATAD3CQ5T2N8 411 aa5.71□□□□□ -1.5
BRCA1-214ENST00000477152 FAM27D1Q5T7N8 215 aa5.71□□□□□ -1.5
BRCA1-214ENST00000477152 RSBN1Q5VWQ0 802 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-214ENST00000477152 C11orf87Q6NUJ2 197 aa5.71□□□□□ -1.5
BRCA1-214ENST00000477152 BAIAP2L2Q6UXY1 529 aa5.71□□□□□ -1.5
BRCA1-214ENST00000477152 SUMF2Q8NBJ7 301 aa5.71□□□□□ -1.5
BRCA1-214ENST00000477152 Q8NFD4 153 aa5.71□□□□□ -1.5
BRCA1-214ENST00000477152 ARL11Q969Q4 196 aa5.71□□□□□ -1.5
BRCA1-214ENST00000477152 MRPS24Q96EL2 167 aaKnown RBP5.71□□□□□ -1.5
BRCA1-214ENST00000477152 NOL4LQ96MY1 436 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-214ENST00000477152 GHITMQ9H3K2 345 aa5.71□□□□□ -1.5
BRCA1-214ENST00000477152 KCNIP1Q9NZI2 227 aa5.71□□□□□ -1.5
BRCA1-214ENST00000477152 ZNF580Q9UK33 172 aa5.71□□□□□ -1.5
BRCA1-214ENST00000477152 TRAV24A0A0B4J272 114 aa5.7□□□□□ -1.5
BRCA1-214ENST00000477152 GAGE12BA1L429 117 aa5.7□□□□□ -1.5
BRCA1-214ENST00000477152 GAGE12HA6NDE8 117 aa5.7□□□□□ -1.5
BRCA1-214ENST00000477152 SAC3D1A6NKF1 404 aa5.7□□□□□ -1.5
BRCA1-214ENST00000477152 J3QRE1 110 aa5.7□□□□□ -1.5
BRCA1-214ENST00000477152 CA11O75493 328 aa5.7□□□□□ -1.5
BRCA1-214ENST00000477152 RGS11O94810 467 aa5.7□□□□□ -1.5
BRCA1-214ENST00000477152 GTF2F2P13984 249 aa5.7□□□□□ -1.5
BRCA1-214ENST00000477152 ZNF93P35789 620 aaPredicted RBP5.7□□□□□ -1.5
BRCA1-214ENST00000477152 ALDH3A2P51648 485 aa5.7□□□□□ -1.5
BRCA1-214ENST00000477152 ZSCAN26Q16670 478 aa5.7□□□□□ -1.5
BRCA1-214ENST00000477152 RPL22L1Q6P5R6 122 aaKnown RBP5.7□□□□□ -1.5
BRCA1-214ENST00000477152 C10orf99Q6UWK7 81 aa5.7□□□□□ -1.5
BRCA1-214ENST00000477152 LHFPL3Q86UP9 236 aa5.7□□□□□ -1.5
BRCA1-214ENST00000477152 KRTAP19-1Q8IUB9 90 aa5.7□□□□□ -1.5
BRCA1-214ENST00000477152 OR52N1Q8NH53 320 aa5.7□□□□□ -1.5
BRCA1-214ENST00000477152 RFESDQ8TAC1 157 aa5.7□□□□□ -1.5
BRCA1-214ENST00000477152 C4orf3Q8WVX3 66 aa5.7□□□□□ -1.5
BRCA1-214ENST00000477152 THRSPQ92748 146 aa5.7□□□□□ -1.5
BRCA1-214ENST00000477152 C9orf16Q9BUW7 83 aa5.7□□□□□ -1.5
BRCA1-214ENST00000477152 TRAPPC2LQ9UL33 140 aa5.7□□□□□ -1.5
BRCA1-214ENST00000477152 LRRC42Q9Y546 428 aa5.7□□□□□ -1.5
BRCA1-214ENST00000477152 PRKDCP78527 4128 aaKnown RBP5.7□□□□□ -1.5
BRCA1-214ENST00000477152 AIPO00170 330 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms