RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 KIAA2026Q5HYC2 2103 aa11.96□□□□□ -0.49
COL4A6-206ENST00000477085 IGHV3-43A0A0B4J1X8 118 aa11.96□□□□□ -0.49
COL4A6-206ENST00000477085 CCSO14618 274 aa11.96□□□□□ -0.49
COL4A6-206ENST00000477085 ADAM20O43506 726 aa11.96□□□□□ -0.49
COL4A6-206ENST00000477085 IGHV2-70P01814 119 aa11.96□□□□□ -0.49
COL4A6-206ENST00000477085 IGHV3-43DP0DP04 118 aa11.96□□□□□ -0.49
COL4A6-206ENST00000477085 ANXA3P12429 323 aa11.96□□□□□ -0.49
COL4A6-206ENST00000477085 OMGP23515 440 aa11.96□□□□□ -0.49
COL4A6-206ENST00000477085 IL2RGP31785 369 aa11.96□□□□□ -0.49
COL4A6-206ENST00000477085 SP6Q3SY56 376 aa11.96□□□□□ -0.49
COL4A6-206ENST00000477085 KCTD9Q7L273 389 aa11.96□□□□□ -0.49
COL4A6-206ENST00000477085 ZNF565Q8N9K5 539 aa11.96□□□□□ -0.49
COL4A6-206ENST00000477085 PHB2Q99623 299 aa11.96□□□□□ -0.49
COL4A6-206ENST00000477085 NAA60Q9H7X0 242 aa11.96□□□□□ -0.49
COL4A6-206ENST00000477085 PLEKHF2Q9H8W4 249 aa11.96□□□□□ -0.49
COL4A6-206ENST00000477085 C19orf12Q9NSK7 152 aa11.96□□□□□ -0.49
COL4A6-206ENST00000477085 KAAG1Q9UBP8 84 aa11.96□□□□□ -0.49
COL4A6-206ENST00000477085 SLC25A10Q9UBX3 287 aaPredicted RBP11.96□□□□□ -0.49
COL4A6-206ENST00000477085 NKX6-3A6NJ46 265 aa11.95□□□□□ -0.5
COL4A6-206ENST00000477085 HSPA12AO43301 675 aa11.95□□□□□ -0.5
COL4A6-206ENST00000477085 DAOP14920 347 aa11.95□□□□□ -0.5
COL4A6-206ENST00000477085 PPP1CCP36873 323 aaKnown RBP11.95□□□□□ -0.5
COL4A6-206ENST00000477085 LOXL3P58215 753 aa11.95□□□□□ -0.5
COL4A6-206ENST00000477085 LTC4SQ16873 150 aa11.95□□□□□ -0.5
COL4A6-206ENST00000477085 ZFP69Q49AA0 526 aa11.95□□□□□ -0.5
COL4A6-206ENST00000477085 AVPI1Q5T686 147 aa11.95□□□□□ -0.5
COL4A6-206ENST00000477085 OR11H4Q8NGC9 324 aa11.95□□□□□ -0.5
COL4A6-206ENST00000477085 OR10V1Q8NGI7 309 aa11.95□□□□□ -0.5
COL4A6-206ENST00000477085 NEU4Q8WWR8 484 aaPredicted RBP11.95□□□□□ -0.5
COL4A6-206ENST00000477085 IGFBPL1Q8WX77 278 aa11.95□□□□□ -0.5
COL4A6-206ENST00000477085 CLEC4MQ9H2X3 399 aaPredicted RBP11.95□□□□□ -0.5
COL4A6-206ENST00000477085 OR6C3Q9NZP0 311 aa11.95□□□□□ -0.5
COL4A6-206ENST00000477085 OPN4Q9UHM6 478 aa11.95□□□□□ -0.5
COL4A6-206ENST00000477085 FBXO9Q9UK97 447 aaPredicted RBP11.95□□□□□ -0.5
COL4A6-206ENST00000477085 SPTAN1Q13813 2472 aaKnown RBP11.95□□□□□ -0.5
COL4A6-206ENST00000477085 TEX13DA0A0J9YY54 714 aaPredicted RBP11.95□□□□□ -0.5
COL4A6-206ENST00000477085 DVL1O14640 695 aa11.95□□□□□ -0.5
COL4A6-206ENST00000477085 MPPED1O15442 326 aa11.95□□□□□ -0.5
COL4A6-206ENST00000477085 FSTL3O95633 263 aa11.95□□□□□ -0.5
COL4A6-206ENST00000477085 IFNA2P01563 188 aa11.95□□□□□ -0.5
COL4A6-206ENST00000477085 OR8U9P0C7N5 309 aa11.95□□□□□ -0.5
COL4A6-206ENST00000477085 NDUFB7P17568 137 aa11.95□□□□□ -0.5
COL4A6-206ENST00000477085 HLA-GP17693 338 aa11.95□□□□□ -0.5
COL4A6-206ENST00000477085 ERVFRD-1P60508 538 aa11.95□□□□□ -0.5
COL4A6-206ENST00000477085 HTD2P86397 168 aa11.95□□□□□ -0.5
COL4A6-206ENST00000477085 ABCA11PQ4W5N1 156 aa11.95□□□□□ -0.5
COL4A6-206ENST00000477085 LPCAT3Q6P1A2 487 aa11.95□□□□□ -0.5
COL4A6-206ENST00000477085 TRAT1Q6PIZ9 186 aa11.95□□□□□ -0.5
COL4A6-206ENST00000477085 SGPP2Q8IWX5 399 aa11.95□□□□□ -0.5
COL4A6-206ENST00000477085 OR8U1Q8NH10 309 aa11.95□□□□□ -0.5
COL4A6-206ENST00000477085 CORO2AQ92828 525 aa11.95□□□□□ -0.5
COL4A6-206ENST00000477085 ZNF486Q96H40 463 aaPredicted RBP11.95□□□□□ -0.5
COL4A6-206ENST00000477085 TP53RKQ96S44 253 aa11.95□□□□□ -0.5
COL4A6-206ENST00000477085 OR2S2Q9NQN1 319 aa11.95□□□□□ -0.5
COL4A6-206ENST00000477085 CALYQ9NYX4 217 aa11.95□□□□□ -0.5
COL4A6-206ENST00000477085 KBTBD11-OT1A0A1B0GTJ5 212 aa11.94□□□□□ -0.5
COL4A6-206ENST00000477085 MPTX1A8MV57 137 aa11.94□□□□□ -0.5
COL4A6-206ENST00000477085 OVOL3O00110 214 aa11.94□□□□□ -0.5
COL4A6-206ENST00000477085 F2RL2O00254 374 aa11.94□□□□□ -0.5
COL4A6-206ENST00000477085 GPR31O00270 319 aa11.94□□□□□ -0.5
COL4A6-206ENST00000477085 SPINT2O43291 252 aa11.94□□□□□ -0.5
COL4A6-206ENST00000477085 TNFSF12O43508 249 aa11.94□□□□□ -0.5
COL4A6-206ENST00000477085 PGLYRP1O75594 196 aaPredicted RBP11.94□□□□□ -0.5
COL4A6-206ENST00000477085 ADAP1O75689 374 aa11.94□□□□□ -0.5
COL4A6-206ENST00000477085 MMP23AO75900 390 aa11.94□□□□□ -0.5
COL4A6-206ENST00000477085 C1QBP02746 253 aa11.94□□□□□ -0.5
COL4A6-206ENST00000477085 OR5AC1P0C628 307 aa11.94□□□□□ -0.5
COL4A6-206ENST00000477085 LUMP51884 338 aaPredicted RBP11.94□□□□□ -0.5
COL4A6-206ENST00000477085 MRPS11P82912 194 aaKnown RBP11.94□□□□□ -0.5
COL4A6-206ENST00000477085 ZNF273Q14593 569 aa11.94□□□□□ -0.5
COL4A6-206ENST00000477085 TMEM187Q14656 261 aa11.94□□□□□ -0.5
COL4A6-206ENST00000477085 ZNF841Q6ZN19 808 aa11.94□□□□□ -0.5
COL4A6-206ENST00000477085 TBC1D26Q86UD7 250 aa11.94□□□□□ -0.5
COL4A6-206ENST00000477085 NOXA1Q86UR1 476 aa11.94□□□□□ -0.5
COL4A6-206ENST00000477085 OR5M8Q8NGP6 311 aa11.94□□□□□ -0.5
COL4A6-206ENST00000477085 GLYATL2Q8WU03 294 aa11.94□□□□□ -0.5
COL4A6-206ENST00000477085 GALNT14Q96FL9 552 aa11.94□□□□□ -0.5
COL4A6-206ENST00000477085 C5orf30Q96GV9 206 aa11.94□□□□□ -0.5
COL4A6-206ENST00000477085 CLN8Q9UBY8 286 aa11.94□□□□□ -0.5
COL4A6-206ENST00000477085 RNF150Q9ULK6 438 aa11.94□□□□□ -0.5
COL4A6-206ENST00000477085 A0A0B4J2A0 478 aa11.93□□□□□ -0.5
COL4A6-206ENST00000477085 GIPP09681 153 aaPredicted RBP11.93□□□□□ -0.5
COL4A6-206ENST00000477085 GZMKP49863 264 aa11.93□□□□□ -0.5
COL4A6-206ENST00000477085 RND3P61587 244 aa11.93□□□□□ -0.5
COL4A6-206ENST00000477085 TLE4Q04727 773 aa11.93□□□□□ -0.5
COL4A6-206ENST00000477085 TMEM200BQ69YZ2 307 aa11.93□□□□□ -0.5
COL4A6-206ENST00000477085 BVESQ8NE79 360 aa11.93□□□□□ -0.5
COL4A6-206ENST00000477085 SEC22AQ96IW7 307 aa11.93□□□□□ -0.5
COL4A6-206ENST00000477085 AGMATQ9BSE5 352 aa11.93□□□□□ -0.5
COL4A6-206ENST00000477085 LINC00574Q9H8X3 128 aa11.93□□□□□ -0.5
COL4A6-206ENST00000477085 SHPKQ9UHJ6 478 aa11.93□□□□□ -0.5
COL4A6-206ENST00000477085 TRGV10A0A0A0MS01 117 aa11.92□□□□□ -0.5
COL4A6-206ENST00000477085 A1L4Q6 167 aa11.92□□□□□ -0.5
COL4A6-206ENST00000477085 CLEC18AA5D8T8 446 aa11.92□□□□□ -0.5
COL4A6-206ENST00000477085 NDUFB3O43676 98 aa11.92□□□□□ -0.5
COL4A6-206ENST00000477085 NDUFA2O43678 99 aa11.92□□□□□ -0.5
COL4A6-206ENST00000477085 F12P00748 615 aaPredicted RBP11.92□□□□□ -0.5
COL4A6-206ENST00000477085 IGHV3-7P01780 117 aa11.92□□□□□ -0.5
COL4A6-206ENST00000477085 ZNF134P52741 427 aa11.92□□□□□ -0.5
COL4A6-206ENST00000477085 MORN2Q502X0 79 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms