RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 PIGPP57054 158 aa23.85■■□□□ 1.41
VEGFA-211ENST00000476772 RPL31P62899 125 aaKnown RBP23.85■■□□□ 1.41
VEGFA-211ENST00000476772 HTD2P86397 168 aa23.85■■□□□ 1.41
VEGFA-211ENST00000476772 ABCA11PQ4W5N1 156 aa23.85■■□□□ 1.41
VEGFA-211ENST00000476772 PHLDA2Q53GA4 152 aa23.85■■□□□ 1.41
VEGFA-211ENST00000476772 OR11H7Q8NGC8 314 aa23.85■■□□□ 1.41
VEGFA-211ENST00000476772 PPP1CCP36873 323 aaKnown RBP23.84■■□□□ 1.41
VEGFA-211ENST00000476772 SUPT4H1P63272 117 aaKnown RBP23.84■■□□□ 1.41
VEGFA-211ENST00000476772 MEF2CQ06413 473 aaPredicted RBP23.84■■□□□ 1.41
VEGFA-211ENST00000476772 OR10V1Q8NGI7 309 aa23.84■■□□□ 1.41
VEGFA-211ENST00000476772 NINJ1Q92982 152 aa23.84■■□□□ 1.41
VEGFA-211ENST00000476772 LINC00312Q9Y6C7 94 aa23.84■■□□□ 1.41
VEGFA-211ENST00000476772 AKAP6Q13023 2319 aa23.84■■□□□ 1.41
VEGFA-211ENST00000476772 KBTBD11-OT1A0A1B0GTJ5 212 aa23.83■■□□□ 1.41
VEGFA-211ENST00000476772 F2RL2O00254 374 aa23.83■■□□□ 1.41
VEGFA-211ENST00000476772 IGHV4-39P01824 125 aa23.83■■□□□ 1.41
VEGFA-211ENST00000476772 OMGP23515 440 aa23.83■■□□□ 1.41
VEGFA-211ENST00000476772 ZNF273Q14593 569 aa23.83■■□□□ 1.41
VEGFA-211ENST00000476772 LPCAT3Q6P1A2 487 aa23.83■■□□□ 1.41
VEGFA-211ENST00000476772 ZNF841Q6ZN19 808 aa23.83■■□□□ 1.41
VEGFA-211ENST00000476772 TOLLIPQ9H0E2 274 aa23.83■■□□□ 1.41
VEGFA-211ENST00000476772 CCL28Q9NRJ3 127 aa23.83■■□□□ 1.41
VEGFA-211ENST00000476772 SLC2A9Q9NRM0 540 aa23.83■■□□□ 1.41
VEGFA-211ENST00000476772 CLN8Q9UBY8 286 aa23.83■■□□□ 1.41
VEGFA-211ENST00000476772 ZNF729A6NN14 1252 aaPredicted RBP23.83■■□□□ 1.4
VEGFA-211ENST00000476772 SULT1A3P0DMM9 295 aa23.83■■□□□ 1.4
VEGFA-211ENST00000476772 SULT1A4P0DMN0 295 aa23.83■■□□□ 1.4
VEGFA-211ENST00000476772 GPR6P46095 362 aaPredicted RBP23.83■■□□□ 1.4
VEGFA-211ENST00000476772 LUMP51884 338 aaPredicted RBP23.83■■□□□ 1.4
VEGFA-211ENST00000476772 CD83Q01151 205 aa23.83■■□□□ 1.4
VEGFA-211ENST00000476772 ZNF818PQ6ZRF7 136 aa23.83■■□□□ 1.4
VEGFA-211ENST00000476772 CASTOR1Q8WTX7 329 aa23.83■■□□□ 1.4
VEGFA-211ENST00000476772 ZNF486Q96H40 463 aaPredicted RBP23.83■■□□□ 1.4
VEGFA-211ENST00000476772 MIOXQ9UGB7 285 aa23.83■■□□□ 1.4
VEGFA-211ENST00000476772 UBE2J1Q9Y385 318 aaPredicted RBP23.83■■□□□ 1.4
VEGFA-211ENST00000476772 HSD17B6O14756 317 aa23.82■■□□□ 1.4
VEGFA-211ENST00000476772 SFT2D2O95562 160 aa23.82■■□□□ 1.4
VEGFA-211ENST00000476772 CXCL3P19876 107 aa23.82■■□□□ 1.4
VEGFA-211ENST00000476772 C12orf45Q8N5I9 185 aaPredicted RBP23.82■■□□□ 1.4
VEGFA-211ENST00000476772 SPICQ8N5J4 248 aa23.82■■□□□ 1.4
VEGFA-211ENST00000476772 ZNF525Q8N782 197 aa23.82■■□□□ 1.4
VEGFA-211ENST00000476772 UXS1Q8NBZ7 420 aa23.82■■□□□ 1.4
VEGFA-211ENST00000476772 ST6GAL2Q96JF0 529 aa23.82■■□□□ 1.4
VEGFA-211ENST00000476772 JPT1Q9UK76 154 aa23.82■■□□□ 1.4
VEGFA-211ENST00000476772 CRYM-AS1A6NIL9 109 aa23.81■■□□□ 1.4
VEGFA-211ENST00000476772 SLC9A3R2Q15599 337 aa23.81■■□□□ 1.4
VEGFA-211ENST00000476772 TMEM200BQ69YZ2 307 aa23.81■■□□□ 1.4
VEGFA-211ENST00000476772 OR8B3Q8NGG8 313 aa23.81■■□□□ 1.4
VEGFA-211ENST00000476772 NEIL1Q96FI4 390 aaPredicted RBP23.81■■□□□ 1.4
VEGFA-211ENST00000476772 OR8B2Q96RD0 313 aa23.81■■□□□ 1.4
VEGFA-211ENST00000476772 RAB9BQ9NP90 201 aa23.81■■□□□ 1.4
VEGFA-211ENST00000476772 GPR31O00270 319 aa23.8■■□□□ 1.4
VEGFA-211ENST00000476772 WNT2P09544 360 aa23.8■■□□□ 1.4
VEGFA-211ENST00000476772 OR8U9P0C7N5 309 aa23.8■■□□□ 1.4
VEGFA-211ENST00000476772 LOXL3P58215 753 aa23.8■■□□□ 1.4
VEGFA-211ENST00000476772 FAM185AQ8N0U4 392 aa23.8■■□□□ 1.4
VEGFA-211ENST00000476772 OR8U1Q8NH10 309 aa23.8■■□□□ 1.4
VEGFA-211ENST00000476772 MITD1Q8WV92 249 aa23.8■■□□□ 1.4
VEGFA-211ENST00000476772 RTN4IP1Q8WWV3 396 aaPredicted RBP23.8■■□□□ 1.4
VEGFA-211ENST00000476772 NRGNQ92686 78 aa23.8■■□□□ 1.4
VEGFA-211ENST00000476772 NARFLQ9H6Q4 476 aa23.8■■□□□ 1.4
VEGFA-211ENST00000476772 RANGRFQ9HD47 186 aaPredicted RBP23.8■■□□□ 1.4
VEGFA-211ENST00000476772 TAS2R3Q9NYW6 316 aa23.8■■□□□ 1.4
VEGFA-211ENST00000476772 GNG12Q9UBI6 72 aa23.8■■□□□ 1.4
VEGFA-211ENST00000476772 LPAR3Q9UBY5 353 aa23.8■■□□□ 1.4
VEGFA-211ENST00000476772 RBM7Q9Y580 266 aaKnown RBP23.8■■□□□ 1.4
VEGFA-211ENST00000476772 TEX13DA0A0J9YY54 714 aaPredicted RBP23.79■■□□□ 1.4
VEGFA-211ENST00000476772 DUS4LO95620 317 aaKnown RBP23.79■■□□□ 1.4
VEGFA-211ENST00000476772 CD34P28906 385 aa23.79■■□□□ 1.4
VEGFA-211ENST00000476772 NLRC3Q7RTR2 1065 aa23.79■■□□□ 1.4
VEGFA-211ENST00000476772 SGPP2Q8IWX5 399 aa23.79■■□□□ 1.4
VEGFA-211ENST00000476772 OR2AK2Q8NG84 335 aa23.79■■□□□ 1.4
VEGFA-211ENST00000476772 LINC00574Q9H8X3 128 aa23.79■■□□□ 1.4
VEGFA-211ENST00000476772 MGAT4CQ9UBM8 478 aa23.79■■□□□ 1.4
VEGFA-211ENST00000476772 CCL3L1P16619 93 aa23.79■■□□□ 1.4
VEGFA-211ENST00000476772 LIN54Q6MZP7 749 aa23.79■■□□□ 1.4
VEGFA-211ENST00000476772 CCDC71LQ8N9Z2 235 aa23.79■■□□□ 1.4
VEGFA-211ENST00000476772 NAA60Q9H7X0 242 aa23.79■■□□□ 1.4
VEGFA-211ENST00000476772 IDI2-AS1Q9NZ38 188 aa23.79■■□□□ 1.4
VEGFA-211ENST00000476772 PRR13Q9NZ81 148 aa23.79■■□□□ 1.4
VEGFA-211ENST00000476772 BOLA2-SMG1P6H3BVE0 249 aa23.78■■□□□ 1.4
VEGFA-211ENST00000476772 C2orf68Q2NKX9 166 aa23.78■■□□□ 1.4
VEGFA-211ENST00000476772 PPP1R14BQ96C90 147 aa23.78■■□□□ 1.4
VEGFA-211ENST00000476772 ZNF714Q96N38 554 aa23.78■■□□□ 1.4
VEGFA-211ENST00000476772 FYTTD1Q96QD9 318 aaKnown RBP23.78■■□□□ 1.4
VEGFA-211ENST00000476772 PHB2Q99623 299 aa23.78■■□□□ 1.4
VEGFA-211ENST00000476772 PATZ1Q9HBE1 687 aaKnown RBP23.78■■□□□ 1.4
VEGFA-211ENST00000476772 KCNS2Q9ULS6 477 aa23.78■■□□□ 1.4
VEGFA-211ENST00000476772 MORN2Q502X0 79 aa23.77■■□□□ 1.4
VEGFA-211ENST00000476772 PRAMEF5Q5TYX0 476 aa23.77■■□□□ 1.4
VEGFA-211ENST00000476772 GAL3ST2Q9H3Q3 398 aa23.77■■□□□ 1.4
VEGFA-211ENST00000476772 GFOD1Q9NXC2 390 aa23.77■■□□□ 1.4
VEGFA-211ENST00000476772 TRBV23-1A0A0A0MS06 115 aa23.76■■□□□ 1.39
VEGFA-211ENST00000476772 YPEL1O60688 119 aa23.76■■□□□ 1.39
VEGFA-211ENST00000476772 MMP23AO75900 390 aa23.76■■□□□ 1.39
VEGFA-211ENST00000476772 IGLV2-14P01704 120 aa23.76■■□□□ 1.39
VEGFA-211ENST00000476772 HNRNPCP07910 306 aaKnown RBP eCLIP23.76■■□□□ 1.39
VEGFA-211ENST00000476772 RND3P61587 244 aa23.76■■□□□ 1.39
VEGFA-211ENST00000476772 WDR25Q64LD2 544 aaPredicted RBP23.76■■□□□ 1.39
VEGFA-211ENST00000476772 YPEL2Q96QA6 119 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms