RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 MGLLQ99685 303 aa9.07□□□□□ -0.96
NUDCD3-206ENST00000475952 CITED2Q99967 270 aaPredicted RBP9.07□□□□□ -0.96
NUDCD3-206ENST00000475952 URM1Q9BTM9 101 aaKnown RBP9.07□□□□□ -0.96
NUDCD3-206ENST00000475952 TM2D1Q9BX74 207 aa9.07□□□□□ -0.96
NUDCD3-206ENST00000475952 TAF9BQ9HBM6 251 aa9.07□□□□□ -0.96
NUDCD3-206ENST00000475952 MBNL3Q9NUK0 354 aaKnown RBP9.07□□□□□ -0.96
NUDCD3-206ENST00000475952 JPT1Q9UK76 154 aa9.07□□□□□ -0.96
NUDCD3-206ENST00000475952 SH2D7A6NKC9 451 aaPredicted RBP9.06□□□□□ -0.96
NUDCD3-206ENST00000475952 SLC17A2O00624 439 aa9.06□□□□□ -0.96
NUDCD3-206ENST00000475952 ATP6V1G2O95670 118 aa9.06□□□□□ -0.96
NUDCD3-206ENST00000475952 AMY1AP04745 511 aa9.06□□□□□ -0.96
NUDCD3-206ENST00000475952 AMY2AP04746 511 aa9.06□□□□□ -0.96
NUDCD3-206ENST00000475952 ARSBP15848 533 aa9.06□□□□□ -0.96
NUDCD3-206ENST00000475952 CALRP27797 417 aaKnown RBP9.06□□□□□ -0.96
NUDCD3-206ENST00000475952 CHATP28329 748 aa9.06□□□□□ -0.96
NUDCD3-206ENST00000475952 MAP2K4P45985 399 aa9.06□□□□□ -0.96
NUDCD3-206ENST00000475952 REG1BP48304 166 aa9.06□□□□□ -0.96
NUDCD3-206ENST00000475952 GABARAPL2P60520 117 aa9.06□□□□□ -0.96
NUDCD3-206ENST00000475952 UNC119Q13432 240 aa9.06□□□□□ -0.96
NUDCD3-206ENST00000475952 ZNF367Q7RTV3 350 aa9.06□□□□□ -0.96
NUDCD3-206ENST00000475952 OR2W3Q7Z3T1 314 aa9.06□□□□□ -0.96
NUDCD3-206ENST00000475952 TGIF2LXQ8IUE1 241 aa9.06□□□□□ -0.96
NUDCD3-206ENST00000475952 C5orf56Q8N8D9 126 aa9.06□□□□□ -0.96
NUDCD3-206ENST00000475952 OR10V1Q8NGI7 309 aa9.06□□□□□ -0.96
NUDCD3-206ENST00000475952 OR1L1Q8NH94 360 aa9.06□□□□□ -0.96
NUDCD3-206ENST00000475952 RTN4IP1Q8WWV3 396 aaPredicted RBP9.06□□□□□ -0.96
NUDCD3-206ENST00000475952 R3HDM4Q96D70 268 aa9.06□□□□□ -0.96
NUDCD3-206ENST00000475952 SULT4A1Q9BR01 284 aa9.06□□□□□ -0.96
NUDCD3-206ENST00000475952 KCNK15Q9H427 330 aa9.06□□□□□ -0.96
NUDCD3-206ENST00000475952 ACOT13Q9NPJ3 140 aa9.06□□□□□ -0.96
NUDCD3-206ENST00000475952 OR2S2Q9NQN1 319 aa9.06□□□□□ -0.96
NUDCD3-206ENST00000475952 AK6Q9Y3D8 172 aaKnown RBP9.06□□□□□ -0.96
NUDCD3-206ENST00000475952 TMEM14DPA8MWL7 114 aa9.05□□□□□ -0.96
NUDCD3-206ENST00000475952 SLC31A2O15432 143 aa9.05□□□□□ -0.96
NUDCD3-206ENST00000475952 RGS11O94810 467 aa9.05□□□□□ -0.96
NUDCD3-206ENST00000475952 PF4V1P10720 104 aa9.05□□□□□ -0.96
NUDCD3-206ENST00000475952 CD37P11049 281 aa9.05□□□□□ -0.96
NUDCD3-206ENST00000475952 PSMD7P51665 324 aa9.05□□□□□ -0.96
NUDCD3-206ENST00000475952 ZNF137PP52743 207 aa9.05□□□□□ -0.96
NUDCD3-206ENST00000475952 HTD2P86397 168 aa9.05□□□□□ -0.96
NUDCD3-206ENST00000475952 CD83Q01151 205 aa9.05□□□□□ -0.96
NUDCD3-206ENST00000475952 FABP5Q01469 135 aa9.05□□□□□ -0.96
NUDCD3-206ENST00000475952 HNF4GQ14541 408 aa9.05□□□□□ -0.96
NUDCD3-206ENST00000475952 RAB11BQ15907 218 aa9.05□□□□□ -0.96
NUDCD3-206ENST00000475952 STEAP3Q658P3 488 aa9.05□□□□□ -0.96
NUDCD3-206ENST00000475952 TMEM91Q6ZNR0 172 aa9.05□□□□□ -0.96
NUDCD3-206ENST00000475952 Q6ZPA2 131 aa9.05□□□□□ -0.96
NUDCD3-206ENST00000475952 MOB1BQ7L9L4 216 aa9.05□□□□□ -0.96
NUDCD3-206ENST00000475952 C6orf201Q7Z4U5 140 aa9.05□□□□□ -0.96
NUDCD3-206ENST00000475952 ZNF439Q8NDP4 499 aa9.05□□□□□ -0.96
NUDCD3-206ENST00000475952 OR2T10Q8NGZ9 312 aa9.05□□□□□ -0.96
NUDCD3-206ENST00000475952 ST6GALNAC6Q969X2 333 aa9.05□□□□□ -0.96
NUDCD3-206ENST00000475952 GALMQ96C23 342 aa9.05□□□□□ -0.96
NUDCD3-206ENST00000475952 NICN1Q9BSH3 213 aa9.05□□□□□ -0.96
NUDCD3-206ENST00000475952 ABHD14AQ9BUJ0 271 aa9.05□□□□□ -0.96
NUDCD3-206ENST00000475952 Q9H521 79 aa9.05□□□□□ -0.96
NUDCD3-206ENST00000475952 CHMP1AQ9HD42 196 aaPredicted RBP9.05□□□□□ -0.96
NUDCD3-206ENST00000475952 PLEKHJ1Q9NW61 149 aa9.05□□□□□ -0.96
NUDCD3-206ENST00000475952 ABRACLQ9P1F3 81 aa9.05□□□□□ -0.96
NUDCD3-206ENST00000475952 LRRC42Q9Y546 428 aa9.05□□□□□ -0.96
NUDCD3-206ENST00000475952 TSSC4Q9Y5U2 329 aaPredicted RBP9.05□□□□□ -0.96
NUDCD3-206ENST00000475952 DNAH9Q9NYC9 4486 aa9.04□□□□□ -0.96
NUDCD3-206ENST00000475952 IGHV3-72A0A0B4J1Y9 119 aa9.04□□□□□ -0.96
NUDCD3-206ENST00000475952 TCRBV4S1A1TA0A5B7 111 aa9.04□□□□□ -0.96
NUDCD3-206ENST00000475952 PSMB11A5LHX3 300 aa9.04□□□□□ -0.96
NUDCD3-206ENST00000475952 CD1BP29016 333 aa9.04□□□□□ -0.96
NUDCD3-206ENST00000475952 BLVRBP30043 206 aaPredicted RBP9.04□□□□□ -0.96
NUDCD3-206ENST00000475952 QRFPP83859 136 aa9.04□□□□□ -0.96
NUDCD3-206ENST00000475952 EBI3Q14213 229 aa9.04□□□□□ -0.96
NUDCD3-206ENST00000475952 P2RY14Q15391 338 aa9.04□□□□□ -0.96
NUDCD3-206ENST00000475952 MORN2Q502X0 79 aa9.04□□□□□ -0.96
NUDCD3-206ENST00000475952 KHDC1LQ5JSQ8 128 aa9.04□□□□□ -0.96
NUDCD3-206ENST00000475952 FAM53AQ6NSI3 398 aaPredicted RBP9.04□□□□□ -0.96
NUDCD3-206ENST00000475952 FOXRED2Q8IWF2 684 aa9.04□□□□□ -0.96
NUDCD3-206ENST00000475952 SVOPQ8N4V2 548 aa9.04□□□□□ -0.96
NUDCD3-206ENST00000475952 SETD6Q8TBK2 473 aa9.04□□□□□ -0.96
NUDCD3-206ENST00000475952 CHPT1Q8WUD6 406 aa9.04□□□□□ -0.96
NUDCD3-206ENST00000475952 EAF1Q96JC9 268 aaPredicted RBP9.04□□□□□ -0.96
NUDCD3-206ENST00000475952 GFI1Q99684 422 aa9.04□□□□□ -0.96
NUDCD3-206ENST00000475952 FAAP24Q9BTP7 215 aa9.04□□□□□ -0.96
NUDCD3-206ENST00000475952 RIMS4Q9H426 269 aaPredicted RBP9.04□□□□□ -0.96
NUDCD3-206ENST00000475952 NDUFB11Q9NX14 153 aa9.04□□□□□ -0.96
NUDCD3-206ENST00000475952 STEAP1Q9UHE8 339 aa9.04□□□□□ -0.96
NUDCD3-206ENST00000475952 A0A1W2PRX2 142 aa9.03□□□□□ -0.96
NUDCD3-206ENST00000475952 NCBP2LA6PVI3 153 aaKnown RBP9.03□□□□□ -0.96
NUDCD3-206ENST00000475952 ADARB2-AS1A8MUL3 147 aa9.03□□□□□ -0.96
NUDCD3-206ENST00000475952 SERPINE3A8MV23 424 aa9.03□□□□□ -0.96
NUDCD3-206ENST00000475952 PDCD5O14737 125 aa9.03□□□□□ -0.96
NUDCD3-206ENST00000475952 YPEL1O60688 119 aa9.03□□□□□ -0.96
NUDCD3-206ENST00000475952 MRPS14O60783 128 aaKnown RBP9.03□□□□□ -0.96
NUDCD3-206ENST00000475952 MOSP00540 346 aa9.03□□□□□ -0.96
NUDCD3-206ENST00000475952 MYL9P24844 172 aa9.03□□□□□ -0.96
NUDCD3-206ENST00000475952 ZNF134P52741 427 aa9.03□□□□□ -0.96
NUDCD3-206ENST00000475952 GNMTQ14749 295 aa9.03□□□□□ -0.96
NUDCD3-206ENST00000475952 HMGN3Q15651 99 aa9.03□□□□□ -0.96
NUDCD3-206ENST00000475952 BEAN1Q3B7T3 259 aa9.03□□□□□ -0.96
NUDCD3-206ENST00000475952 CT45A1Q5HYN5 189 aa9.03□□□□□ -0.96
NUDCD3-206ENST00000475952 SLC35E3Q7Z769 313 aa9.03□□□□□ -0.96
NUDCD3-206ENST00000475952 Q8N6K4 173 aa9.03□□□□□ -0.96
NUDCD3-206ENST00000475952 OR2AK2Q8NG84 335 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms