RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 MANBALQ9NQG1 85 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 CADP27708 2225 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 RBFOX3A6NFN3 312 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 A8MWP6 167 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 EREGO14944 169 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 PPP1CCP36873 323 aaKnown RBP10.13□□□□□ -0.79
U2AF1-209ENST00000475639 FUT7Q11130 342 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 ZNF385CQ66K41 422 aaPredicted RBP10.13□□□□□ -0.79
U2AF1-209ENST00000475639 SLC25A42Q86VD7 318 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 HIST3H2BBQ8N257 126 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 OR1F12Q8NHA8 337 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 ABHD14AQ9BUJ0 271 aa10.13□□□□□ -0.79
U2AF1-209ENST00000475639 POLR2AP24928 1970 aaKnown RBP10.13□□□□□ -0.79
U2AF1-209ENST00000475639 SPRY1O43609 319 aaPredicted RBP10.12□□□□□ -0.79
U2AF1-209ENST00000475639 TCF21O43680 179 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 KIR2DS2P43631 304 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 ASCL1P50553 236 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 ZXDAP98168 799 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 LRRC75AQ8NAA5 344 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 OR2Z1Q8NG97 314 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 RAB1CQ92928 201 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 MRGPRFQ96AM1 343 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 SNX22Q96L94 193 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 ONECUT1Q9UBC0 465 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 FBXL17Q9UF56 701 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 ANXA10Q9UJ72 324 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 NUP210LQ5VU65 1888 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 TMEM265A0A087WTH1 108 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 CENPVL1A0A0U1RR11 272 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 OOEPA6NGQ2 149 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 OR5B21A6NL26 309 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 HIST1H1EP10412 219 aaKnown RBP10.12□□□□□ -0.79
U2AF1-209ENST00000475639 ACP1P24666 158 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 TMEM70Q9BUB7 260 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 YBX2Q9Y2T7 364 aaKnown RBP10.12□□□□□ -0.79
U2AF1-209ENST00000475639 MOB4Q9Y3A3 225 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 SCN5AQ14524 2016 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 SFT2D2O95562 160 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 MPZP25189 248 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 GABRA6Q16445 453 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 OR4A47Q6IF82 309 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 MRPL54Q6P161 138 aaKnown RBP10.12□□□□□ -0.79
U2AF1-209ENST00000475639 C5orf24Q7Z6I8 188 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 OR4S2Q8NH73 311 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 Q8WTZ3 238 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 SPACA9Q96E40 222 aaPredicted RBP10.12□□□□□ -0.79
U2AF1-209ENST00000475639 OR2V2Q96R30 315 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 XIRP2A4UGR9 3374 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 HIST1H2BKO60814 126 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 PDCD6O75340 191 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 HIST1H2BJP06899 126 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 HIST1H2BOP23527 126 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 HIST1H2BBP33778 126 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 GNG10P50151 68 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 HIST1H2BDP58876 126 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 HIST1H2BCP62807 126 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 DEFB103AP81534 67 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 HIST2H2BEQ16778 126 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.12□□□□□ -0.79
U2AF1-209ENST00000475639 SPATA46Q5T0L3 261 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 PTCRAQ6ISU1 281 aaPredicted RBP10.12□□□□□ -0.79
U2AF1-209ENST00000475639 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.12□□□□□ -0.79
U2AF1-209ENST00000475639 HIST1H2BHQ93079 126 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 HIST1H2BNQ99877 126 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 HIST1H2BMQ99879 126 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 SCRT1Q9BWW7 348 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 PARP11Q9NR21 331 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 SDK2Q58EX2 2172 aa10.12□□□□□ -0.79
U2AF1-209ENST00000475639 TRAV17A0A0B4J275 112 aa10.11□□□□□ -0.79
U2AF1-209ENST00000475639 HIST1H1DP16402 221 aaKnown RBP10.11□□□□□ -0.79
U2AF1-209ENST00000475639 MESTQ5EB52 335 aa10.11□□□□□ -0.79
U2AF1-209ENST00000475639 C12orf54Q6X4T0 127 aa10.11□□□□□ -0.79
U2AF1-209ENST00000475639 FAM219AQ8IW50 185 aa10.11□□□□□ -0.79
U2AF1-209ENST00000475639 CARFQ8N187 725 aa10.11□□□□□ -0.79
U2AF1-209ENST00000475639 C8orf44Q96CB5 159 aa10.11□□□□□ -0.79
U2AF1-209ENST00000475639 GALNT14Q96FL9 552 aa10.11□□□□□ -0.79
U2AF1-209ENST00000475639 ZNF764Q96H86 408 aaPredicted RBP10.11□□□□□ -0.79
U2AF1-209ENST00000475639 GABRG3Q99928 467 aa10.11□□□□□ -0.79
U2AF1-209ENST00000475639 ANGPTL4Q9BY76 406 aa10.11□□□□□ -0.79
U2AF1-209ENST00000475639 OR5AC2Q9NZP5 309 aa10.11□□□□□ -0.79
U2AF1-209ENST00000475639 CDC42EP3Q9UKI2 254 aa10.11□□□□□ -0.79
U2AF1-209ENST00000475639 A0A1W2PPC1 479 aa10.11□□□□□ -0.79
U2AF1-209ENST00000475639 SYNGR2O43760 224 aa10.11□□□□□ -0.79
U2AF1-209ENST00000475639 CA2P00918 260 aa10.11□□□□□ -0.79
U2AF1-209ENST00000475639 MGPP08493 103 aa10.11□□□□□ -0.79
U2AF1-209ENST00000475639 KLRB1Q12918 225 aa10.11□□□□□ -0.79
U2AF1-209ENST00000475639 KCNMB1Q16558 191 aa10.11□□□□□ -0.79
U2AF1-209ENST00000475639 SPANXN1Q5VSR9 72 aa10.11□□□□□ -0.79
U2AF1-209ENST00000475639 DEGS2Q6QHC5 323 aa10.11□□□□□ -0.79
U2AF1-209ENST00000475639 NRTNQ99748 197 aa10.11□□□□□ -0.79
U2AF1-209ENST00000475639 STARD10Q9Y365 291 aa10.11□□□□□ -0.79
U2AF1-209ENST00000475639 MRPS16Q9Y3D3 137 aaKnown RBP10.11□□□□□ -0.79
U2AF1-209ENST00000475639 C11orf94C9JXX5 98 aa10.11□□□□□ -0.79
U2AF1-209ENST00000475639 HBZP02008 142 aa10.11□□□□□ -0.79
U2AF1-209ENST00000475639 KIR3DL2P43630 455 aa10.11□□□□□ -0.79
U2AF1-209ENST00000475639 FAM53BQ14153 422 aa10.11□□□□□ -0.79
U2AF1-209ENST00000475639 GGTLC2Q14390 218 aa10.11□□□□□ -0.79
U2AF1-209ENST00000475639 SNRNP40Q96DI7 357 aaKnown RBP10.11□□□□□ -0.79
U2AF1-209ENST00000475639 CRISPLD2Q9H0B8 497 aa10.11□□□□□ -0.79
U2AF1-209ENST00000475639 CES1P1Q9UKY3 287 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms