RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-222	ENST00000475580	VWF	P04275	2813 aa		13.2	□□□□□ -0.3
VPS8-222	ENST00000475580	CCRL2	O00421	344 aa		13.2	□□□□□ -0.3
VPS8-222	ENST00000475580	NAPSA	O96009	420 aa		13.2	□□□□□ -0.3
VPS8-222	ENST00000475580	GAL	P22466	123 aa		13.2	□□□□□ -0.3
VPS8-222	ENST00000475580	BLVRB	P30043	206 aa	Predicted RBP	13.2	□□□□□ -0.3
VPS8-222	ENST00000475580	GNMT	Q14749	295 aa		13.2	□□□□□ -0.3
VPS8-222	ENST00000475580	C2orf76	Q3KRA6	126 aa		13.2	□□□□□ -0.3
VPS8-222	ENST00000475580	TMEM30B	Q3MIR4	351 aa		13.2	□□□□□ -0.3
VPS8-222	ENST00000475580	CT45A1	Q5HYN5	189 aa		13.2	□□□□□ -0.3
VPS8-222	ENST00000475580	HES5	Q5TA89	166 aa		13.2	□□□□□ -0.3
VPS8-222	ENST00000475580	ZNF880	Q6PDB4	577 aa		13.2	□□□□□ -0.3
VPS8-222	ENST00000475580	ZNF773	Q6PK81	442 aa		13.2	□□□□□ -0.3
VPS8-222	ENST00000475580	SLC25A48	Q6ZT89	311 aa	Known RBP	13.2	□□□□□ -0.3
VPS8-222	ENST00000475580	ZNF554	Q86TJ5	538 aa		13.2	□□□□□ -0.3
VPS8-222	ENST00000475580	C11orf44	Q8N8P7	122 aa		13.2	□□□□□ -0.3
VPS8-222	ENST00000475580	OR10V1	Q8NGI7	309 aa		13.2	□□□□□ -0.3
VPS8-222	ENST00000475580	CT45A3	Q8NHU0	189 aa		13.2	□□□□□ -0.3
VPS8-222	ENST00000475580	RAB9B	Q9NP90	201 aa		13.2	□□□□□ -0.3
VPS8-222	ENST00000475580	GNG12	Q9UBI6	72 aa		13.2	□□□□□ -0.3
VPS8-222	ENST00000475580	IGHV1-3	A0A0C4DH29	117 aa		13.19	□□□□□ -0.3
VPS8-222	ENST00000475580	SH2D7	A6NKC9	451 aa	Predicted RBP	13.19	□□□□□ -0.3
VPS8-222	ENST00000475580	TSPAN15	O95858	294 aa		13.19	□□□□□ -0.3
VPS8-222	ENST00000475580	PSMB9	P28065	219 aa		13.19	□□□□□ -0.3
VPS8-222	ENST00000475580	REG1B	P48304	166 aa		13.19	□□□□□ -0.3
VPS8-222	ENST00000475580	ZNF137P	P52743	207 aa		13.19	□□□□□ -0.3
VPS8-222	ENST00000475580	TMEM50B	P56557	158 aa		13.19	□□□□□ -0.3
VPS8-222	ENST00000475580	HMGN3	Q15651	99 aa		13.19	□□□□□ -0.3
VPS8-222	ENST00000475580	C22orf42	Q6IC83	251 aa		13.19	□□□□□ -0.3
VPS8-222	ENST00000475580		Q6ZTK2	550 aa		13.19	□□□□□ -0.3
VPS8-222	ENST00000475580	NR2C2AP	Q86WQ0	139 aa		13.19	□□□□□ -0.3
VPS8-222	ENST00000475580	OR52L2P	Q8NGH6	319 aa		13.19	□□□□□ -0.3
VPS8-222	ENST00000475580	FCGR1B	Q92637	280 aa		13.19	□□□□□ -0.3
VPS8-222	ENST00000475580	URM1	Q9BTM9	101 aa	Known RBP	13.19	□□□□□ -0.3
VPS8-222	ENST00000475580	KCNIP1	Q9NZI2	227 aa		13.19	□□□□□ -0.3
VPS8-222	ENST00000475580	STEAP1	Q9UHE8	339 aa		13.19	□□□□□ -0.3
VPS8-222	ENST00000475580	TMEM272	A0A1B0GTI8	110 aa		13.18	□□□□□ -0.3
VPS8-222	ENST00000475580	GAPDH	P04406	335 aa	Known RBP	13.18	□□□□□ -0.3
VPS8-222	ENST00000475580	FAM106CP	P0CH98	169 aa		13.18	□□□□□ -0.3
VPS8-222	ENST00000475580	VDAC2	P45880	294 aa	Predicted RBP	13.18	□□□□□ -0.3
VPS8-222	ENST00000475580	PSMD7	P51665	324 aa		13.18	□□□□□ -0.3
VPS8-222	ENST00000475580	HTD2	P86397	168 aa		13.18	□□□□□ -0.3
VPS8-222	ENST00000475580	ABCA11P	Q4W5N1	156 aa		13.18	□□□□□ -0.3
VPS8-222	ENST00000475580	MORN2	Q502X0	79 aa		13.18	□□□□□ -0.3
VPS8-222	ENST00000475580	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	13.18	□□□□□ -0.3
VPS8-222	ENST00000475580	AKR1E2	Q96JD6	320 aa		13.18	□□□□□ -0.3
VPS8-222	ENST00000475580	HDHD3	Q9BSH5	251 aa	Predicted RBP	13.18	□□□□□ -0.3
VPS8-222	ENST00000475580	OR2S2	Q9NQN1	319 aa		13.18	□□□□□ -0.3
VPS8-222	ENST00000475580	PLEKHJ1	Q9NW61	149 aa		13.18	□□□□□ -0.3
VPS8-222	ENST00000475580	AK3	Q9UIJ7	227 aa		13.18	□□□□□ -0.3
VPS8-222	ENST00000475580	HSF4	Q9ULV5	492 aa		13.18	□□□□□ -0.3
VPS8-222	ENST00000475580	TRBV6-6	A0A0A6YYG2	114 aa		13.17	□□□□□ -0.3
VPS8-222	ENST00000475580	IGHV3-72	A0A0B4J1Y9	119 aa		13.17	□□□□□ -0.3
VPS8-222	ENST00000475580	IFITM5	A6NNB3	132 aa		13.17	□□□□□ -0.3
VPS8-222	ENST00000475580	PDCD5	O14737	125 aa		13.17	□□□□□ -0.3
VPS8-222	ENST00000475580	IGKV1D-33	P01593	117 aa		13.17	□□□□□ -0.3
VPS8-222	ENST00000475580	IGKV1-33	P01594	117 aa		13.17	□□□□□ -0.3
VPS8-222	ENST00000475580	CD28	P10747	220 aa		13.17	□□□□□ -0.3
VPS8-222	ENST00000475580	MYL9	P24844	172 aa		13.17	□□□□□ -0.3
VPS8-222	ENST00000475580	IL3RA	P26951	378 aa		13.17	□□□□□ -0.3
VPS8-222	ENST00000475580	FGF9	P31371	208 aa	Predicted RBP	13.17	□□□□□ -0.3
VPS8-222	ENST00000475580	PPP1CC	P36873	323 aa	Known RBP	13.17	□□□□□ -0.3
VPS8-222	ENST00000475580	VEGFC	P49767	419 aa		13.17	□□□□□ -0.3
VPS8-222	ENST00000475580	EBI3	Q14213	229 aa		13.17	□□□□□ -0.3
VPS8-222	ENST00000475580	PLAC9	Q5JTB6	97 aa		13.17	□□□□□ -0.3
VPS8-222	ENST00000475580	ARHGAP5-AS1	Q96IT6	56 aa		13.17	□□□□□ -0.3
VPS8-222	ENST00000475580	MMP27	Q9H306	513 aa		13.17	□□□□□ -0.3
VPS8-222	ENST00000475580	TXNL4B	Q9NX01	149 aa	Known RBP	13.17	□□□□□ -0.3
VPS8-222	ENST00000475580	JPT1	Q9UK76	154 aa		13.17	□□□□□ -0.3
VPS8-222	ENST00000475580	MOB4	Q9Y3A3	225 aa		13.17	□□□□□ -0.3
VPS8-222	ENST00000475580		A0A0B4J203	849 aa		13.16	□□□□□ -0.3
VPS8-222	ENST00000475580		M0QZK8	103 aa		13.16	□□□□□ -0.3
VPS8-222	ENST00000475580	LPL	P06858	475 aa		13.16	□□□□□ -0.3
VPS8-222	ENST00000475580	TMEM11	P17152	192 aa		13.16	□□□□□ -0.3
VPS8-222	ENST00000475580	RAB3B	P20337	219 aa		13.16	□□□□□ -0.3
VPS8-222	ENST00000475580	C2orf68	Q2NKX9	166 aa		13.16	□□□□□ -0.3
VPS8-222	ENST00000475580	KCTD21	Q4G0X4	260 aa		13.16	□□□□□ -0.3
VPS8-222	ENST00000475580	STEAP3	Q658P3	488 aa		13.16	□□□□□ -0.3
VPS8-222	ENST00000475580	MOB3B	Q86TA1	216 aa		13.16	□□□□□ -0.3
VPS8-222	ENST00000475580	ODF3L1	Q8IXM7	274 aa		13.16	□□□□□ -0.3
VPS8-222	ENST00000475580	IZUMO1	Q8IYV9	350 aa		13.16	□□□□□ -0.3
VPS8-222	ENST00000475580		Q8N6K4	173 aa		13.16	□□□□□ -0.3
VPS8-222	ENST00000475580	RBMXL1	Q96E39	390 aa	Known RBP	13.16	□□□□□ -0.3
VPS8-222	ENST00000475580	PECR	Q9BY49	303 aa		13.16	□□□□□ -0.3
VPS8-222	ENST00000475580	STUB1	Q9UNE7	303 aa		13.16	□□□□□ -0.3
VPS8-222	ENST00000475580	ADARB2-AS1	A8MUL3	147 aa		13.15	□□□□□ -0.3
VPS8-222	ENST00000475580	YPEL1	O60688	119 aa		13.15	□□□□□ -0.3
VPS8-222	ENST00000475580	FBXO24	O75426	580 aa		13.15	□□□□□ -0.3
VPS8-222	ENST00000475580	HES1	Q14469	280 aa		13.15	□□□□□ -0.3
VPS8-222	ENST00000475580	HNF4G	Q14541	408 aa		13.15	□□□□□ -0.3
VPS8-222	ENST00000475580	MOGAT2	Q3SYC2	334 aa		13.15	□□□□□ -0.3
VPS8-222	ENST00000475580	ARSJ	Q5FYB0	599 aa	Predicted RBP	13.15	□□□□□ -0.3
VPS8-222	ENST00000475580	LY6G6F	Q5SQ64	297 aa		13.15	□□□□□ -0.3
VPS8-222	ENST00000475580	MOB1B	Q7L9L4	216 aa		13.15	□□□□□ -0.3
VPS8-222	ENST00000475580	C5orf56	Q8N8D9	126 aa		13.15	□□□□□ -0.3
VPS8-222	ENST00000475580	OR56B1	Q8NGI3	324 aa		13.15	□□□□□ -0.3
VPS8-222	ENST00000475580	GALM	Q96C23	342 aa		13.15	□□□□□ -0.3
VPS8-222	ENST00000475580	EAF1	Q96JC9	268 aa	Predicted RBP	13.15	□□□□□ -0.3
VPS8-222	ENST00000475580	YPEL2	Q96QA6	119 aa		13.15	□□□□□ -0.3
VPS8-222	ENST00000475580	ABHD14A	Q9BUJ0	271 aa		13.15	□□□□□ -0.3
VPS8-222	ENST00000475580	RIMS4	Q9H426	269 aa	Predicted RBP	13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms