RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 PCOLCEQ15113 449 aa11.69□□□□□ -0.54
SEMA4D-217ENST00000475255 FAM53AQ6NSI3 398 aaPredicted RBP11.69□□□□□ -0.54
SEMA4D-217ENST00000475255 VASH2Q86V25 355 aa11.69□□□□□ -0.54
SEMA4D-217ENST00000475255 H1FOOQ8IZA3 346 aaPredicted RBP11.69□□□□□ -0.54
SEMA4D-217ENST00000475255 OR1P1Q8NH06 330 aa11.69□□□□□ -0.54
SEMA4D-217ENST00000475255 CISD1Q9NZ45 108 aaKnown RBP11.69□□□□□ -0.54
SEMA4D-217ENST00000475255 A0A0U1RQK1 487 aa11.69□□□□□ -0.54
SEMA4D-217ENST00000475255 LILRA1O75019 489 aa11.69□□□□□ -0.54
SEMA4D-217ENST00000475255 VAMP5O95183 116 aa11.69□□□□□ -0.54
SEMA4D-217ENST00000475255 IL18BPO95998 194 aa11.69□□□□□ -0.54
SEMA4D-217ENST00000475255 MDH2P40926 338 aaKnown RBP11.69□□□□□ -0.54
SEMA4D-217ENST00000475255 GNB2P62879 340 aa11.69□□□□□ -0.54
SEMA4D-217ENST00000475255 PMP22Q01453 160 aa11.69□□□□□ -0.54
SEMA4D-217ENST00000475255 PRDX4Q13162 271 aa11.69□□□□□ -0.54
SEMA4D-217ENST00000475255 BATFQ16520 125 aa11.69□□□□□ -0.54
SEMA4D-217ENST00000475255 WIPI1Q5MNZ9 446 aaPredicted RBP11.69□□□□□ -0.54
SEMA4D-217ENST00000475255 ZNF525Q8N782 197 aa11.69□□□□□ -0.54
SEMA4D-217ENST00000475255 OR2V1Q8NHB1 315 aa11.69□□□□□ -0.54
SEMA4D-217ENST00000475255 SNIP1Q8TAD8 396 aaKnown RBP11.69□□□□□ -0.54
SEMA4D-217ENST00000475255 CCDC74BQ96LY2 380 aa11.69□□□□□ -0.54
SEMA4D-217ENST00000475255 KCNS2Q9ULS6 477 aa11.69□□□□□ -0.54
SEMA4D-217ENST00000475255 MUC3AQ02505 3323 aa11.69□□□□□ -0.54
SEMA4D-217ENST00000475255 IGHV5-10-1A0A0J9YXX1 117 aa11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 KIAA1324LA8MWY0 1029 aaPredicted RBP11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 NGFP01138 241 aa11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 CEACAM1P13688 526 aa11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 CD81P60033 236 aa11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 SRYQ05066 204 aa11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 SPINK9Q5DT21 86 aa11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 TMEM183AQ8IXX5 376 aa11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 FAM185AQ8N0U4 392 aa11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 DDA1Q9BW61 102 aa11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 PLSCR2Q9NRY7 297 aa11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 NCKAP5O14513 1909 aa11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 A8MWP6 167 aa11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 WDR1O75083 606 aa11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 DFFBO76075 338 aa11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 NAPSAO96009 420 aa11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 CST2P09228 141 aa11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 FAM3BP58499 235 aaPredicted RBP11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 JOSD1Q15040 202 aaPredicted RBP11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 PCSK4Q6UW60 755 aa11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 TMPRSS7Q7RTY8 843 aa11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 HLA-CQ95604 372 aa11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 ZNF552Q9H707 407 aaPredicted RBP11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 CDH20Q9HBT6 801 aa11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 SEMA5BQ9P283 1151 aa11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 PRSS50Q9UI38 385 aa11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 C5orf49A4QMS7 147 aa11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 PPP5D1E7EU14 171 aa11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 CHRNA7P36544 502 aa11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 DSCR4P56555 118 aaPredicted RBP11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 ZXDAP98168 799 aa11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 CST9LP1Q5W188 147 aa11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 RPP25LQ8N5L8 163 aaKnown RBP11.68□□□□□ -0.54
SEMA4D-217ENST00000475255 CD300LBA8K4G0 201 aa11.67□□□□□ -0.54
SEMA4D-217ENST00000475255 SYNGR2O43760 224 aa11.67□□□□□ -0.54
SEMA4D-217ENST00000475255 OPN1MWP04001 364 aa11.67□□□□□ -0.54
SEMA4D-217ENST00000475255 OPN1MW2P0DN77 364 aa11.67□□□□□ -0.54
SEMA4D-217ENST00000475255 OPN1MW3P0DN78 364 aa11.67□□□□□ -0.54
SEMA4D-217ENST00000475255 GALR1P47211 349 aa11.67□□□□□ -0.54
SEMA4D-217ENST00000475255 OR8B8Q15620 311 aa11.67□□□□□ -0.54
SEMA4D-217ENST00000475255 KMT5CQ86Y97 462 aa11.67□□□□□ -0.54
SEMA4D-217ENST00000475255 OR10V1Q8NGI7 309 aa11.67□□□□□ -0.54
SEMA4D-217ENST00000475255 SLC39A9Q9NUM3 307 aa11.67□□□□□ -0.54
SEMA4D-217ENST00000475255 TRBV24-1A0A075B6N3 115 aa11.67□□□□□ -0.54
SEMA4D-217ENST00000475255 B4DEV8 164 aa11.67□□□□□ -0.54
SEMA4D-217ENST00000475255 H0Y980 276 aa11.67□□□□□ -0.54
SEMA4D-217ENST00000475255 H7BYZ3 331 aa11.67□□□□□ -0.54
SEMA4D-217ENST00000475255 TUSC2O75896 110 aa11.67□□□□□ -0.54
SEMA4D-217ENST00000475255 IGKV1-5P01602 117 aa11.67□□□□□ -0.54
SEMA4D-217ENST00000475255 HNF1AP20823 631 aa11.67□□□□□ -0.54
SEMA4D-217ENST00000475255 BPIFB3P59826 476 aa11.67□□□□□ -0.54
SEMA4D-217ENST00000475255 RAC1P63000 192 aa11.67□□□□□ -0.54
SEMA4D-217ENST00000475255 HOXA4Q00056 320 aaPredicted RBP11.67□□□□□ -0.54
SEMA4D-217ENST00000475255 OR5D13Q8NGL4 314 aa11.67□□□□□ -0.54
SEMA4D-217ENST00000475255 OR4F5Q8NH21 305 aa11.67□□□□□ -0.54
SEMA4D-217ENST00000475255 OR5B12Q96R08 314 aa11.67□□□□□ -0.54
SEMA4D-217ENST00000475255 OR4F4Q96R69 305 aa11.67□□□□□ -0.54
SEMA4D-217ENST00000475255 C19orf25Q9UFG5 118 aaPredicted RBP11.67□□□□□ -0.54
SEMA4D-217ENST00000475255 VAX2Q9UIW0 290 aa11.67□□□□□ -0.54
SEMA4D-217ENST00000475255 TCFL5Q9UL49 500 aa11.67□□□□□ -0.54
SEMA4D-217ENST00000475255 ADAMTS20P59510 1910 aa11.67□□□□□ -0.54
SEMA4D-217ENST00000475255 ZNF705FA8MVS1 300 aaPredicted RBP11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 PFN1P07737 140 aaKnown RBP11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 ZNF705DP0CH99 300 aaPredicted RBP11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 ZNF705BP0CI00 300 aaPredicted RBP11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 COL8A2P25067 703 aa11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 WNT5AP41221 380 aa11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 TSPAN7P41732 249 aa11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 RPL29P47914 159 aaKnown RBP11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 RPL23P62829 140 aaKnown RBP11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 BSXQ3C1V8 233 aa11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 OR10D3Q8NH80 312 aa11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 PRRG4Q9BZD6 226 aa11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 IL36GQ9NZH8 169 aa11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 RNF150Q9ULK6 438 aa11.66□□□□□ -0.54
SEMA4D-217ENST00000475255 DSPP15924 2871 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms