RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 IL36GQ9NZH8 169 aa9.73□□□□□ -0.85
SKA3-206ENST00000475251 KIAA1456Q9P272 454 aa9.73□□□□□ -0.85
SKA3-206ENST00000475251 POMPQ9Y244 141 aa9.73□□□□□ -0.85
SKA3-206ENST00000475251 J3QRE1 110 aa9.72□□□□□ -0.85
SKA3-206ENST00000475251 NBR2O15453 112 aa9.72□□□□□ -0.85
SKA3-206ENST00000475251 ZNF780AO75290 641 aaPredicted RBP9.72□□□□□ -0.85
SKA3-206ENST00000475251 CD2P06729 351 aa9.72□□□□□ -0.85
SKA3-206ENST00000475251 FASP25445 335 aa9.72□□□□□ -0.85
SKA3-206ENST00000475251 CD40LGP29965 261 aa9.72□□□□□ -0.85
SKA3-206ENST00000475251 GYS2P54840 703 aa9.72□□□□□ -0.85
SKA3-206ENST00000475251 ACTBP60709 375 aa9.72□□□□□ -0.85
SKA3-206ENST00000475251 MEDAGQ5VYS4 303 aa9.72□□□□□ -0.85
SKA3-206ENST00000475251 LIN54Q6MZP7 749 aa9.72□□□□□ -0.85
SKA3-206ENST00000475251 FAM53AQ6NSI3 398 aaPredicted RBP9.72□□□□□ -0.85
SKA3-206ENST00000475251 ANKRD13BQ86YJ7 626 aa9.72□□□□□ -0.85
SKA3-206ENST00000475251 SYS1Q8N2H4 156 aa9.72□□□□□ -0.85
SKA3-206ENST00000475251 CCDC197Q8NCU1 140 aa9.72□□□□□ -0.85
SKA3-206ENST00000475251 ZNF439Q8NDP4 499 aa9.72□□□□□ -0.85
SKA3-206ENST00000475251 CCDC107Q8WV48 283 aa9.72□□□□□ -0.85
SKA3-206ENST00000475251 ALX4Q9H161 411 aaPredicted RBP9.72□□□□□ -0.85
SKA3-206ENST00000475251 C19orf73Q9NVV2 129 aa9.72□□□□□ -0.85
SKA3-206ENST00000475251 TRAPPC2LQ9UL33 140 aa9.72□□□□□ -0.85
SKA3-206ENST00000475251 STUB1Q9UNE7 303 aa9.72□□□□□ -0.85
SKA3-206ENST00000475251 IGHV4OR15-8A0A075B7B6 117 aa9.71□□□□□ -0.86
SKA3-206ENST00000475251 A0A087WW49 117 aa9.71□□□□□ -0.86
SKA3-206ENST00000475251 IGHV7-81A0A0B4J1V7 117 aa9.71□□□□□ -0.86
SKA3-206ENST00000475251 A0A1W2PN81 502 aa9.71□□□□□ -0.86
SKA3-206ENST00000475251 GEMIN2O14893 280 aaKnown RBP9.71□□□□□ -0.86
SKA3-206ENST00000475251 SLC31A2O15432 143 aa9.71□□□□□ -0.86
SKA3-206ENST00000475251 MT-ND4P03905 459 aa9.71□□□□□ -0.86
SKA3-206ENST00000475251 HSPB1P04792 205 aaKnown RBP9.71□□□□□ -0.86
SKA3-206ENST00000475251 FCGR1AP12314 374 aa9.71□□□□□ -0.86
SKA3-206ENST00000475251 BLVRBP30043 206 aaPredicted RBP9.71□□□□□ -0.86
SKA3-206ENST00000475251 CHRNA7P36544 502 aa9.71□□□□□ -0.86
SKA3-206ENST00000475251 VHLP40337 213 aa9.71□□□□□ -0.86
SKA3-206ENST00000475251 TMEM267Q0VDI3 215 aaPredicted RBP9.71□□□□□ -0.86
SKA3-206ENST00000475251 ECSCRQ19T08 205 aa9.71□□□□□ -0.86
SKA3-206ENST00000475251 CT45A1Q5HYN5 189 aa9.71□□□□□ -0.86
SKA3-206ENST00000475251 ZNF497Q6ZNH5 498 aa9.71□□□□□ -0.86
SKA3-206ENST00000475251 CT45A3Q8NHU0 189 aa9.71□□□□□ -0.86
SKA3-206ENST00000475251 UBALD1Q8TB05 177 aa9.71□□□□□ -0.86
SKA3-206ENST00000475251 ANKRD60Q9BZ19 345 aa9.71□□□□□ -0.86
SKA3-206ENST00000475251 RNF150Q9ULK6 438 aa9.71□□□□□ -0.86
SKA3-206ENST00000475251 ING4Q9UNL4 249 aa9.71□□□□□ -0.86
SKA3-206ENST00000475251 FOXA2Q9Y261 457 aaPredicted RBP9.71□□□□□ -0.86
SKA3-206ENST00000475251 STARD9Q9P2P6 4700 aa9.71□□□□□ -0.86
SKA3-206ENST00000475251 C12orf77C9JDV5 145 aa9.7□□□□□ -0.86
SKA3-206ENST00000475251 MCRIP1C9JLW8 97 aa9.7□□□□□ -0.86
SKA3-206ENST00000475251 CDRT1O95170 752 aa9.7□□□□□ -0.86
SKA3-206ENST00000475251 IGLV1-51P01701 117 aa9.7□□□□□ -0.86
SKA3-206ENST00000475251 GTF2F2P13984 249 aa9.7□□□□□ -0.86
SKA3-206ENST00000475251 ARSBP15848 533 aa9.7□□□□□ -0.86
SKA3-206ENST00000475251 SERPINA2P20848 420 aa9.7□□□□□ -0.86
SKA3-206ENST00000475251 POLR2IP36954 125 aaKnown RBP9.7□□□□□ -0.86
SKA3-206ENST00000475251 ZNF134P52741 427 aa9.7□□□□□ -0.86
SKA3-206ENST00000475251 CRIP2P52943 208 aaPredicted RBP9.7□□□□□ -0.86
SKA3-206ENST00000475251 PPP3R1P63098 170 aa9.7□□□□□ -0.86
SKA3-206ENST00000475251 GPR176Q14439 515 aa9.7□□□□□ -0.86
SKA3-206ENST00000475251 C5orf64Q2M2E5 130 aa9.7□□□□□ -0.86
SKA3-206ENST00000475251 SLC25A30Q5SVS4 291 aa9.7□□□□□ -0.86
SKA3-206ENST00000475251 SYT6Q5T7P8 510 aaPredicted RBP9.7□□□□□ -0.86
SKA3-206ENST00000475251 ZNF660Q6AZW8 331 aaPredicted RBP9.7□□□□□ -0.86
SKA3-206ENST00000475251 ZNF529Q6P280 563 aa9.7□□□□□ -0.86
SKA3-206ENST00000475251 Q8N1Y9 231 aa9.7□□□□□ -0.86
SKA3-206ENST00000475251 PRR18Q8N4B5 295 aa9.7□□□□□ -0.86
SKA3-206ENST00000475251 NPBQ8NG41 125 aa9.7□□□□□ -0.86
SKA3-206ENST00000475251 OR10V1Q8NGI7 309 aa9.7□□□□□ -0.86
SKA3-206ENST00000475251 OR51A2Q8NGJ7 313 aa9.7□□□□□ -0.86
SKA3-206ENST00000475251 RSRP1Q9BUV0 290 aa9.7□□□□□ -0.86
SKA3-206ENST00000475251 ALG8Q9BVK2 526 aa9.7□□□□□ -0.86
SKA3-206ENST00000475251 TMEM138Q9NPI0 162 aa9.7□□□□□ -0.86
SKA3-206ENST00000475251 TPSG1Q9NRR2 321 aa9.7□□□□□ -0.86
SKA3-206ENST00000475251 CSMD3Q7Z407 3707 aa9.7□□□□□ -0.86
SKA3-206ENST00000475251 H0Y980 276 aa9.69□□□□□ -0.86
SKA3-206ENST00000475251 CA11O75493 328 aa9.69□□□□□ -0.86
SKA3-206ENST00000475251 HBZP02008 142 aa9.69□□□□□ -0.86
SKA3-206ENST00000475251 ZNF93P35789 620 aaPredicted RBP9.69□□□□□ -0.86
SKA3-206ENST00000475251 PDCD1LG2Q9BQ51 273 aa9.69□□□□□ -0.86
SKA3-206ENST00000475251 ABHD14AQ9BUJ0 271 aa9.69□□□□□ -0.86
SKA3-206ENST00000475251 SLA2Q9H6Q3 261 aa9.69□□□□□ -0.86
SKA3-206ENST00000475251 OR2S2Q9NQN1 319 aa9.69□□□□□ -0.86
SKA3-206ENST00000475251 TAS2R4Q9NYW5 299 aa9.69□□□□□ -0.86
SKA3-206ENST00000475251 EXOGQ9Y2C4 368 aaKnown RBP9.69□□□□□ -0.86
SKA3-206ENST00000475251 HYDINQ4G0P3 5121 aa9.69□□□□□ -0.86
SKA3-206ENST00000475251 NDUFA3O95167 84 aa9.68□□□□□ -0.86
SKA3-206ENST00000475251 ZP3P21754 424 aa9.68□□□□□ -0.86
SKA3-206ENST00000475251 GBX2P52951 348 aaPredicted RBP9.68□□□□□ -0.86
SKA3-206ENST00000475251 SNRPGP62308 76 aaKnown RBP9.68□□□□□ -0.86
SKA3-206ENST00000475251 RAB40BQ12829 278 aa9.68□□□□□ -0.86
SKA3-206ENST00000475251 HAGHQ16775 308 aa9.68□□□□□ -0.86
SKA3-206ENST00000475251 DDI2Q5TDH0 399 aa9.68□□□□□ -0.86
SKA3-206ENST00000475251 ZNF554Q86TJ5 538 aa9.68□□□□□ -0.86
SKA3-206ENST00000475251 LHFPL3Q86UP9 236 aa9.68□□□□□ -0.86
SKA3-206ENST00000475251 GTSCR1Q86UQ5 136 aa9.68□□□□□ -0.86
SKA3-206ENST00000475251 GPR148Q8TDV2 347 aa9.68□□□□□ -0.86
SKA3-206ENST00000475251 ABHD5Q8WTS1 349 aa9.68□□□□□ -0.86
SKA3-206ENST00000475251 TUBA4BQ9H853 241 aa9.68□□□□□ -0.86
SKA3-206ENST00000475251 ETAA1Q9NY74 926 aa9.68□□□□□ -0.86
SKA3-206ENST00000475251 KCNIP1Q9NZI2 227 aa9.68□□□□□ -0.86
SKA3-206ENST00000475251 ZNF581Q9P0T4 197 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms