RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 PDZK1IP1Q13113 114 aa9.58□□□□□ -0.88
HLA-DOB-208ENST00000475235 SNX29P2Q8IUI4 249 aa9.58□□□□□ -0.88
HLA-DOB-208ENST00000475235 TCEANCQ8N8B7 351 aa9.58□□□□□ -0.88
HLA-DOB-208ENST00000475235 RAB40AQ8WXH6 277 aa9.58□□□□□ -0.88
HLA-DOB-208ENST00000475235 MRPS24Q96EL2 167 aaKnown RBP9.58□□□□□ -0.88
HLA-DOB-208ENST00000475235 SMIM8Q96KF7 97 aa9.58□□□□□ -0.88
HLA-DOB-208ENST00000475235 OR8B4Q96RC9 309 aa9.58□□□□□ -0.88
HLA-DOB-208ENST00000475235 NICN1Q9BSH3 213 aa9.58□□□□□ -0.88
HLA-DOB-208ENST00000475235 RTL8AQ9BWD3 113 aa9.58□□□□□ -0.88
HLA-DOB-208ENST00000475235 V9GYS6 101 aa9.58□□□□□ -0.88
HLA-DOB-208ENST00000475235 A0A1B0GW15 77 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 K7EQM0 130 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 SAP30O75446 220 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 AKR1C3P42330 323 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 GPR12P47775 334 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 HCCSP53701 268 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 EFNB1P98172 346 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 PAX2Q02962 417 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 PAX8Q06710 450 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 TAF9Q16594 264 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 FAM74A1Q5RGS3 127 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 OR2G6Q5TZ20 316 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 CD276Q5ZPR3 534 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 WDR25Q64LD2 544 aaPredicted RBP9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 SFRP4Q6FHJ7 346 aaPredicted RBP9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 XAF1Q6GPH4 301 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 NRARPQ7Z6K4 114 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 C1QL4Q86Z23 238 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 PARP16Q8N5Y8 322 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 GCSAMQ8N6F7 178 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 BOLLQ8N9W6 283 aaKnown RBP9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 PXT1Q8NFP0 134 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 OR8B12Q8NGG6 310 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 COQ8AQ8NI60 647 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 ORAOV1Q8WV07 137 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 ASB13Q8WXK3 278 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 C5orf30Q96GV9 206 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 URM1Q9BTM9 101 aaKnown RBP9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 ALG8Q9BVK2 526 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 GABARAPL3Q9BY60 117 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 MOB1AQ9H8S9 216 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 RHOFQ9HBH0 211 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 FAM206AQ9NX38 181 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 GAR1Q9NY12 217 aaKnown RBP9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 RASL12Q9NYN1 266 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 RCC2Q9P258 522 aaKnown RBP9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 OAZ3Q9UMX2 235 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 COL6A5A8TX70 2615 aa9.57□□□□□ -0.88
HLA-DOB-208ENST00000475235 KIR2DS1A0A191URI9 304 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 TGOLN2O43493 480 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 ENSAO43768 121 aaKnown RBP9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 VENTXO95231 258 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 LHBP01229 141 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 EPHA2P29317 976 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 MAP2K3P46734 347 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 PRDX4Q13162 271 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 RBMS2Q15434 407 aaKnown RBP9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 COX19Q49B96 90 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 TEX36Q5VZQ5 186 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 LYPD2Q6UXB3 125 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 ZNF841Q6ZN19 808 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 ZNF826PQ6ZT77 177 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 SLC35F2Q8IXU6 374 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 PPP1R35Q8TAP8 253 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 RXFP4Q8TDU9 374 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 TECTBQ96PL2 329 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 HIST1H2AAQ96QV6 131 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 SLC6A7Q99884 636 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 ALKBH7Q9BT30 221 aaPredicted RBP9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 TLNRD1Q9H1K6 362 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 CLN6Q9NWW5 311 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 IKZF2Q9UKS7 526 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 ZNF816-ZNF321PA0A0X1KG74 233 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 ZNF850A8MQ14 1090 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 ZNF670-ZNF695F2Z2N8 137 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 K7ERU9 68 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 TBPP20226 339 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 ACKR3P25106 362 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 CFHR2P36980 270 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 RAB31Q13636 194 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 NEDD8Q15843 81 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 C5orf47Q569G3 176 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 C10orf91Q5T1B1 145 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 ZNF322Q6U7Q0 402 aaPredicted RBP9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 WDR82Q6UXN9 313 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 ZNF562Q6V9R5 426 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 TMEM144Q7Z5S9 345 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 BCDIN3DQ7Z5W3 292 aaKnown RBP9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 WDR86Q86TI4 376 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 CALHM1Q8IU99 346 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 ZDHHC23Q8IYP9 409 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 LRRC29Q8WV35 223 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 OR5P3Q8WZ94 311 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 PIGCQ92535 297 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 UPRTQ96BW1 309 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 HRASLS5Q96KN8 279 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 LYZL4Q96KX0 146 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 IL4I1Q96RQ9 567 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 ADI1Q9BV57 179 aa9.56□□□□□ -0.88
HLA-DOB-208ENST00000475235 SNHG12Q9BXW3 62 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms