RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 OR10V1Q8NGI7 309 aa12.77□□□□□ -0.37
COL1A1-204ENST00000474644 ZNF596Q8TC21 504 aa12.77□□□□□ -0.37
COL1A1-204ENST00000474644 MAFIPQ8WZ33 124 aa12.77□□□□□ -0.37
COL1A1-204ENST00000474644 GALMQ96C23 342 aa12.77□□□□□ -0.37
COL1A1-204ENST00000474644 ESM1Q9NQ30 184 aa12.77□□□□□ -0.37
COL1A1-204ENST00000474644 ZNF230Q9UIE0 474 aaPredicted RBP12.77□□□□□ -0.37
COL1A1-204ENST00000474644 JPT1Q9UK76 154 aa12.77□□□□□ -0.37
COL1A1-204ENST00000474644 A0A0A6YYJ9 748 aa12.76□□□□□ -0.37
COL1A1-204ENST00000474644 TRDCB7Z8K6 153 aa12.76□□□□□ -0.37
COL1A1-204ENST00000474644 J3QR06 171 aa12.76□□□□□ -0.37
COL1A1-204ENST00000474644 MELTFP08582 738 aa12.76□□□□□ -0.37
COL1A1-204ENST00000474644 SCTP09683 121 aa12.76□□□□□ -0.37
COL1A1-204ENST00000474644 DTYMKP23919 212 aa12.76□□□□□ -0.37
COL1A1-204ENST00000474644 PRRX1P54821 245 aa12.76□□□□□ -0.37
COL1A1-204ENST00000474644 PITPNAQ00169 270 aa12.76□□□□□ -0.37
COL1A1-204ENST00000474644 BAMBIQ13145 260 aa12.76□□□□□ -0.37
COL1A1-204ENST00000474644 Q3ZCU0 254 aa12.76□□□□□ -0.37
COL1A1-204ENST00000474644 MINOS1Q5TGZ0 78 aa12.76□□□□□ -0.37
COL1A1-204ENST00000474644 Q6YL49 198 aa12.76□□□□□ -0.37
COL1A1-204ENST00000474644 IL1F10Q8WWZ1 152 aa12.76□□□□□ -0.37
COL1A1-204ENST00000474644 ZDHHC16Q969W1 377 aa12.76□□□□□ -0.37
COL1A1-204ENST00000474644 SLIRPQ9GZT3 109 aaKnown RBP12.76□□□□□ -0.37
COL1A1-204ENST00000474644 MMP28Q9H239 520 aa12.76□□□□□ -0.37
COL1A1-204ENST00000474644 OR2S2Q9NQN1 319 aa12.76□□□□□ -0.37
COL1A1-204ENST00000474644 MINOS1-NBL1R4GNA1 71 aa12.76□□□□□ -0.37
COL1A1-204ENST00000474644 A0A1W2PPE3 182 aa12.75□□□□□ -0.37
COL1A1-204ENST00000474644 DPPA5A6NC42 116 aa12.75□□□□□ -0.37
COL1A1-204ENST00000474644 DNAJC9-AS1A6NH13 148 aa12.75□□□□□ -0.37
COL1A1-204ENST00000474644 BUB1B-PAK6H3BSN5 160 aa12.75□□□□□ -0.37
COL1A1-204ENST00000474644 HOXA3O43365 443 aaPredicted RBP12.75□□□□□ -0.37
COL1A1-204ENST00000474644 VENTXO95231 258 aa12.75□□□□□ -0.37
COL1A1-204ENST00000474644 PTHLHP12272 177 aa12.75□□□□□ -0.37
COL1A1-204ENST00000474644 PAX6P26367 422 aa12.75□□□□□ -0.37
COL1A1-204ENST00000474644 HTR1DP28221 377 aa12.75□□□□□ -0.37
COL1A1-204ENST00000474644 PPP1CCP36873 323 aaKnown RBP12.75□□□□□ -0.37
COL1A1-204ENST00000474644 MNDAP41218 407 aa12.75□□□□□ -0.37
COL1A1-204ENST00000474644 KIR2DS4P43632 304 aa12.75□□□□□ -0.37
COL1A1-204ENST00000474644 SRSF2Q01130 221 aaKnown RBP12.75□□□□□ -0.37
COL1A1-204ENST00000474644 KIR2DS1Q14954 304 aa12.75□□□□□ -0.37
COL1A1-204ENST00000474644 STEAP3Q658P3 488 aa12.75□□□□□ -0.37
COL1A1-204ENST00000474644 Q6ZS49 121 aa12.75□□□□□ -0.37
COL1A1-204ENST00000474644 LAX1Q8IWV1 398 aa12.75□□□□□ -0.37
COL1A1-204ENST00000474644 DYNAPQ8N1N2 210 aa12.75□□□□□ -0.37
COL1A1-204ENST00000474644 ZDHHC22Q8N966 263 aa12.75□□□□□ -0.37
COL1A1-204ENST00000474644 C8orf31Q8N9H6 132 aa12.75□□□□□ -0.37
COL1A1-204ENST00000474644 ZNF439Q8NDP4 499 aa12.75□□□□□ -0.37
COL1A1-204ENST00000474644 JMJD8Q96S16 334 aa12.75□□□□□ -0.37
COL1A1-204ENST00000474644 DCUN1D5Q9BTE7 237 aa12.75□□□□□ -0.37
COL1A1-204ENST00000474644 MIXL1Q9H2W2 232 aa12.75□□□□□ -0.37
COL1A1-204ENST00000474644 STAB1Q9NY15 2570 aa12.75□□□□□ -0.37
COL1A1-204ENST00000474644 IGKV1D-8A0A087WSZ0 117 aa12.74□□□□□ -0.37
COL1A1-204ENST00000474644 IGKV1-6A0A0C4DH72 117 aa12.74□□□□□ -0.37
COL1A1-204ENST00000474644 FAM25AB3EWG3 89 aa12.74□□□□□ -0.37
COL1A1-204ENST00000474644 FAM25CB3EWG5 89 aa12.74□□□□□ -0.37
COL1A1-204ENST00000474644 FAM25GB3EWG6 89 aa12.74□□□□□ -0.37
COL1A1-204ENST00000474644 CTDSP2O14595 271 aa12.74□□□□□ -0.37
COL1A1-204ENST00000474644 SLC31A2O15432 143 aa12.74□□□□□ -0.37
COL1A1-204ENST00000474644 FABP7O15540 132 aa12.74□□□□□ -0.37
COL1A1-204ENST00000474644 HERPUD1Q15011 391 aa12.74□□□□□ -0.37
COL1A1-204ENST00000474644 SSX2Q16385 188 aa12.74□□□□□ -0.37
COL1A1-204ENST00000474644 SRSF7Q16629 238 aaKnown RBP eCLIP12.74□□□□□ -0.37
COL1A1-204ENST00000474644 FOXB2Q5VYV0 432 aa12.74□□□□□ -0.37
COL1A1-204ENST00000474644 LINC00311Q8N616 119 aa12.74□□□□□ -0.37
COL1A1-204ENST00000474644 OR4A4PQ8NGN8 299 aa12.74□□□□□ -0.37
COL1A1-204ENST00000474644 GCDHQ92947 438 aaPredicted RBP12.74□□□□□ -0.37
COL1A1-204ENST00000474644 MALSU1Q96EH3 234 aa12.74□□□□□ -0.37
COL1A1-204ENST00000474644 CABLES2Q9BTV7 478 aa12.74□□□□□ -0.37
COL1A1-204ENST00000474644 C6orf62Q9GZU0 229 aaPredicted RBP12.74□□□□□ -0.37
COL1A1-204ENST00000474644 NDUFA13Q9P0J0 144 aa12.74□□□□□ -0.37
COL1A1-204ENST00000474644 OR1A1Q9P1Q5 309 aa12.74□□□□□ -0.37
COL1A1-204ENST00000474644 DPM3Q9P2X0 92 aa12.74□□□□□ -0.37
COL1A1-204ENST00000474644 AMMECR1Q9Y4X0 333 aaPredicted RBP12.74□□□□□ -0.37
COL1A1-204ENST00000474644 LEUTXA8MZ59 168 aa12.73□□□□□ -0.37
COL1A1-204ENST00000474644 LY6LH3BQJ8 138 aa12.73□□□□□ -0.37
COL1A1-204ENST00000474644 RGS5O15539 181 aa12.73□□□□□ -0.37
COL1A1-204ENST00000474644 YPEL1O60688 119 aa12.73□□□□□ -0.37
COL1A1-204ENST00000474644 IGHV4-59P01825 116 aa12.73□□□□□ -0.37
COL1A1-204ENST00000474644 HLA-DQB1P01920 261 aa12.73□□□□□ -0.37
COL1A1-204ENST00000474644 GSTT2P0CG29 244 aa12.73□□□□□ -0.37
COL1A1-204ENST00000474644 GSTT2BP0CG30 244 aa12.73□□□□□ -0.37
COL1A1-204ENST00000474644 IER3P46695 156 aa12.73□□□□□ -0.37
COL1A1-204ENST00000474644 ZNF134P52741 427 aa12.73□□□□□ -0.37
COL1A1-204ENST00000474644 MADCAM1Q13477 382 aa12.73□□□□□ -0.37
COL1A1-204ENST00000474644 SLC9A3R2Q15599 337 aa12.73□□□□□ -0.37
COL1A1-204ENST00000474644 MORN2Q502X0 79 aa12.73□□□□□ -0.37
COL1A1-204ENST00000474644 PLA1AQ53H76 456 aa12.73□□□□□ -0.37
COL1A1-204ENST00000474644 TPTE2P1Q5T6R2 138 aa12.73□□□□□ -0.37
COL1A1-204ENST00000474644 SLC25A48Q6ZT89 311 aaKnown RBP12.73□□□□□ -0.37
COL1A1-204ENST00000474644 OR10X1Q8NGY0 326 aa12.73□□□□□ -0.37
COL1A1-204ENST00000474644 MCFD2Q8NI22 146 aa12.73□□□□□ -0.37
COL1A1-204ENST00000474644 SSMEM1Q8WWF3 244 aa12.73□□□□□ -0.37
COL1A1-204ENST00000474644 CREB3L1Q96BA8 519 aa12.73□□□□□ -0.37
COL1A1-204ENST00000474644 DUX5Q96PT3 197 aa12.73□□□□□ -0.37
COL1A1-204ENST00000474644 YPEL2Q96QA6 119 aa12.73□□□□□ -0.37
COL1A1-204ENST00000474644 OCSTAMPQ9BR26 566 aa12.73□□□□□ -0.37
COL1A1-204ENST00000474644 ST6GALNAC5Q9BVH7 336 aa12.73□□□□□ -0.37
COL1A1-204ENST00000474644 NXF2Q9GZY0 626 aaKnown RBP12.73□□□□□ -0.37
COL1A1-204ENST00000474644 MEGF9Q9H1U4 602 aa12.73□□□□□ -0.37
COL1A1-204ENST00000474644 EXTL2Q9UBQ6 330 aa12.73□□□□□ -0.37
COL1A1-204ENST00000474644 SLC23A1Q9UHI7 598 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms