RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 SAT2Q96F10 170 aaPredicted RBP18.25■□□□□ 0.51
CCM2-206ENST00000474617 SLC25A31Q9H0C2 315 aa18.25■□□□□ 0.51
CCM2-206ENST00000474617 RNF7Q9UBF6 113 aa18.25■□□□□ 0.51
CCM2-206ENST00000474617 NKX2-6A6NCS4 301 aa18.24■□□□□ 0.51
CCM2-206ENST00000474617 I3L521 148 aa18.24■□□□□ 0.51
CCM2-206ENST00000474617 HBZP02008 142 aa18.24■□□□□ 0.51
CCM2-206ENST00000474617 FAM87AP0C7U9 286 aa18.24■□□□□ 0.51
CCM2-206ENST00000474617 TNFRSF1AP19438 455 aa18.24■□□□□ 0.51
CCM2-206ENST00000474617 TNFAIP6P98066 277 aaPredicted RBP18.24■□□□□ 0.51
CCM2-206ENST00000474617 AESQ08117 197 aa18.24■□□□□ 0.51
CCM2-206ENST00000474617 TMEM30BQ3MIR4 351 aa18.24■□□□□ 0.51
CCM2-206ENST00000474617 ALKBH2Q6NS38 261 aa18.24■□□□□ 0.51
CCM2-206ENST00000474617 FOXRED2Q8IWF2 684 aa18.24■□□□□ 0.51
CCM2-206ENST00000474617 ZNF561Q8N587 486 aa18.24■□□□□ 0.51
CCM2-206ENST00000474617 IGHV3-64DA0A0J9YX35 117 aa18.23■□□□□ 0.51
CCM2-206ENST00000474617 SHOXO15266 292 aa18.23■□□□□ 0.51
CCM2-206ENST00000474617 CEBPDP49716 269 aaPredicted RBP18.23■□□□□ 0.51
CCM2-206ENST00000474617 CATR1Q13166 79 aa18.23■□□□□ 0.51
CCM2-206ENST00000474617 VHLLQ6RSH7 139 aa18.23■□□□□ 0.51
CCM2-206ENST00000474617 MOGAT3Q86VF5 341 aa18.23■□□□□ 0.51
CCM2-206ENST00000474617 FAM219AQ8IW50 185 aa18.23■□□□□ 0.51
CCM2-206ENST00000474617 CCDC28AQ8IWP9 274 aa18.23■□□□□ 0.51
CCM2-206ENST00000474617 PRR18Q8N4B5 295 aa18.23■□□□□ 0.51
CCM2-206ENST00000474617 CD177Q8N6Q3 437 aa18.23■□□□□ 0.51
CCM2-206ENST00000474617 OR52M1Q8NGK5 317 aa18.23■□□□□ 0.51
CCM2-206ENST00000474617 REG4Q9BYZ8 158 aa18.23■□□□□ 0.51
CCM2-206ENST00000474617 FAM234AQ9H0X4 552 aa18.23■□□□□ 0.51
CCM2-206ENST00000474617 OR6C3Q9NZP0 311 aa18.23■□□□□ 0.51
CCM2-206ENST00000474617 A8MXK9 166 aa18.23■□□□□ 0.51
CCM2-206ENST00000474617 SPRY3O43610 288 aa18.23■□□□□ 0.51
CCM2-206ENST00000474617 FGF2P09038 288 aa18.23■□□□□ 0.51
CCM2-206ENST00000474617 TMEM33P57088 247 aa18.23■□□□□ 0.51
CCM2-206ENST00000474617 ID3Q02535 119 aa18.23■□□□□ 0.51
CCM2-206ENST00000474617 BAXQ07812 192 aa18.23■□□□□ 0.51
CCM2-206ENST00000474617 UQCC3Q6UW78 93 aa18.23■□□□□ 0.51
CCM2-206ENST00000474617 ITLN1Q8WWA0 313 aa18.23■□□□□ 0.51
CCM2-206ENST00000474617 KCNS2Q9ULS6 477 aa18.23■□□□□ 0.51
CCM2-206ENST00000474617 LAMP3Q9UQV4 416 aa18.23■□□□□ 0.51
CCM2-206ENST00000474617 IGKV1D-17A0A075B6S4 117 aa18.22■□□□□ 0.51
CCM2-206ENST00000474617 K7N7A8 449 aa18.22■□□□□ 0.51
CCM2-206ENST00000474617 ADAM20O43506 726 aa18.22■□□□□ 0.51
CCM2-206ENST00000474617 IGLV2-14P01704 120 aa18.22■□□□□ 0.51
CCM2-206ENST00000474617 IGHV1-46P01743 117 aa18.22■□□□□ 0.51
CCM2-206ENST00000474617 OR8U9P0C7N5 309 aa18.22■□□□□ 0.51
CCM2-206ENST00000474617 IRF2P14316 349 aa18.22■□□□□ 0.51
CCM2-206ENST00000474617 MUC1P15941 1255 aaPredicted RBP18.22■□□□□ 0.51
CCM2-206ENST00000474617 ZP3P21754 424 aa18.22■□□□□ 0.51
CCM2-206ENST00000474617 ASCL1P50553 236 aa18.22■□□□□ 0.51
CCM2-206ENST00000474617 ZNF66Q6ZN08 573 aa18.22■□□□□ 0.51
CCM2-206ENST00000474617 ST6GALNAC3Q8NDV1 305 aa18.22■□□□□ 0.51
CCM2-206ENST00000474617 OR8U1Q8NH10 309 aa18.22■□□□□ 0.51
CCM2-206ENST00000474617 SDSLQ96GA7 329 aa18.22■□□□□ 0.51
CCM2-206ENST00000474617 CXorf58Q96LI9 332 aa18.22■□□□□ 0.51
CCM2-206ENST00000474617 FBXL17Q9UF56 701 aa18.22■□□□□ 0.51
CCM2-206ENST00000474617 JPT1Q9UK76 154 aa18.22■□□□□ 0.51
CCM2-206ENST00000474617 RAXQ9Y2V3 346 aa18.22■□□□□ 0.51
CCM2-206ENST00000474617 CFAP47Q6ZTR5 3102 aa18.21■□□□□ 0.51
CCM2-206ENST00000474617 ODAMA1E959 279 aa18.21■□□□□ 0.51
CCM2-206ENST00000474617 RAB19A4D1S5 217 aa18.21■□□□□ 0.51
CCM2-206ENST00000474617 LRRC30A6NM36 301 aa18.21■□□□□ 0.51
CCM2-206ENST00000474617 ITGB1BP1O14713 200 aa18.21■□□□□ 0.51
CCM2-206ENST00000474617 SFTPCP11686 197 aa18.21■□□□□ 0.51
CCM2-206ENST00000474617 VAMP2P63027 116 aa18.21■□□□□ 0.51
CCM2-206ENST00000474617 FBXL19-AS1Q494R0 122 aa18.21■□□□□ 0.51
CCM2-206ENST00000474617 FAM209AQ5JX71 171 aa18.21■□□□□ 0.51
CCM2-206ENST00000474617 WFDC8Q8IUA0 241 aa18.21■□□□□ 0.51
CCM2-206ENST00000474617 DRAM1Q8N682 238 aa18.21■□□□□ 0.51
CCM2-206ENST00000474617 OR1L1Q8NH94 360 aa18.21■□□□□ 0.51
CCM2-206ENST00000474617 LRRC46Q96FV0 321 aa18.21■□□□□ 0.51
CCM2-206ENST00000474617 ARV1Q9H2C2 271 aa18.21■□□□□ 0.51
CCM2-206ENST00000474617 C11orf1Q9H5F2 150 aa18.21■□□□□ 0.51
CCM2-206ENST00000474617 ESRP2Q9H6T0 727 aaKnown RBP18.21■□□□□ 0.51
CCM2-206ENST00000474617 COA4Q9NYJ1 87 aa18.21■□□□□ 0.51
CCM2-206ENST00000474617 RCL1Q9Y2P8 373 aaKnown RBP18.21■□□□□ 0.51
CCM2-206ENST00000474617 FAM90A26D6RGX4 464 aa18.2■□□□□ 0.5
CCM2-206ENST00000474617 TEX46H3BTG2 121 aa18.2■□□□□ 0.5
CCM2-206ENST00000474617 ABCD4O14678 606 aa18.2■□□□□ 0.5
CCM2-206ENST00000474617 PITX3O75364 302 aa18.2■□□□□ 0.5
CCM2-206ENST00000474617 EGR1P18146 543 aa18.2■□□□□ 0.5
CCM2-206ENST00000474617 C5orf24Q7Z6I8 188 aa18.2■□□□□ 0.5
CCM2-206ENST00000474617 OR2C3Q8N628 320 aa18.2■□□□□ 0.5
CCM2-206ENST00000474617 DMBX1Q8NFW5 382 aa18.2■□□□□ 0.5
CCM2-206ENST00000474617 OR51H1Q8NH63 302 aa18.2■□□□□ 0.5
CCM2-206ENST00000474617 PCNPQ8WW12 178 aaKnown RBP18.2■□□□□ 0.5
CCM2-206ENST00000474617 ARL11Q969Q4 196 aa18.2■□□□□ 0.5
CCM2-206ENST00000474617 RAB40CQ96S21 281 aa18.2■□□□□ 0.5
CCM2-206ENST00000474617 EGLN1Q9GZT9 426 aa18.2■□□□□ 0.5
CCM2-206ENST00000474617 BARX1Q9HBU1 254 aaPredicted RBP18.2■□□□□ 0.5
CCM2-206ENST00000474617 GCM1Q9NP62 436 aa18.2■□□□□ 0.5
CCM2-206ENST00000474617 LYRM2Q9NU23 88 aaPredicted RBP18.2■□□□□ 0.5
CCM2-206ENST00000474617 CEP295Q9C0D2 2601 aa18.2■□□□□ 0.5
CCM2-206ENST00000474617 DPRXA6NFQ7 191 aa18.19■□□□□ 0.5
CCM2-206ENST00000474617 WRBO00258 174 aa18.19■□□□□ 0.5
CCM2-206ENST00000474617 KCNAB3O43448 404 aa18.19■□□□□ 0.5
CCM2-206ENST00000474617 TNFSF12O43508 249 aa18.19■□□□□ 0.5
CCM2-206ENST00000474617 CA7P43166 264 aa18.19■□□□□ 0.5
CCM2-206ENST00000474617 GLIPR1P48060 266 aa18.19■□□□□ 0.5
CCM2-206ENST00000474617 CHD3Q12873 2000 aaKnown RBP18.19■□□□□ 0.5
CCM2-206ENST00000474617 ZNF266Q14584 549 aa18.19■□□□□ 0.5
CCM2-206ENST00000474617 RNASE11Q8TAA1 199 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms