RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 FNDC10F2Z333 226 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 K7EMT4 169 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 OVOL3O00110 214 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 UBL3O95164 117 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 SFTA3P0C7M3 94 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 UBE2NP61088 152 aaKnown RBP2.92□□□□□ -1.94
UBR3-208ENST00000474426 RPL24P83731 157 aaKnown RBP2.92□□□□□ -1.94
UBR3-208ENST00000474426 HBMQ6B0K9 141 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.92□□□□□ -1.94
UBR3-208ENST00000474426 TMEFF1Q8IYR6 380 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 TMEM229BQ8NBD8 167 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 OR5D16Q8NGK9 328 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 MBD3L1Q8WWY6 194 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 HIST1H2ACQ93077 130 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 ISL2Q96A47 359 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 MUCL1Q96DR8 90 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 TVP23BQ9NYZ1 205 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 UQCR10Q9UDW1 63 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 DENND4CQ5VZ89 1909 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 NUP205Q92621 2012 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 ZNF816-ZNF321PA0A0X1KG74 233 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 A0A1W2PNR3 127 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 DCDC2BA2VCK2 349 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 UNC119BA6NIH7 251 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 K7EPK0 472 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 NME4O00746 187 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 NPFFO15130 113 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 CLDN14O95500 239 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 MT-ATP8P03928 68 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 SMIM10L2AP0DMW4 78 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 SMIM10L2BP0DMW5 78 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 FSTP19883 344 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 RPS23P62266 143 aaKnown RBP2.92□□□□□ -1.94
UBR3-208ENST00000474426 CRADDP78560 199 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 OR1C1Q15619 314 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 ZNF672Q499Z4 452 aaPredicted RBP2.92□□□□□ -1.94
UBR3-208ENST00000474426 ACSF3Q4G176 576 aaPredicted RBP2.92□□□□□ -1.94
UBR3-208ENST00000474426 FHL5Q5TD97 284 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 EEF1DP3Q658K8 133 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 Q6AWC8 147 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 GOLT1AQ6ZVE7 132 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 BHLHA9Q7RTU4 235 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 FAM71E2Q8N5Q1 922 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 ZNF740Q8NDX6 193 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 TMEM54Q969K7 222 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 WDYHV1Q96HA8 205 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 C5orf66Q9H5L9 145 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 JPT2Q9H910 190 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 YTHDF2Q9Y5A9 579 aaKnown RBP2.92□□□□□ -1.94
UBR3-208ENST00000474426 IGHV2-26A0A0B4J1V2 119 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 A0A0B4J2A0 478 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 TCRBV3S1A0A5B6 114 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 OR2H2O95918 312 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 C1RP00736 705 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 CXCL1P09341 107 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 SCTP09683 121 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 IGLC2P0DOY2 106 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 IGLC3P0DOY3 106 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 SRD5A1P18405 259 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 GPR183P32249 361 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 NDUFV3P56181 108 aaKnown RBP2.92□□□□□ -1.94
UBR3-208ENST00000474426 MRPS6P82932 125 aaKnown RBP2.92□□□□□ -1.94
UBR3-208ENST00000474426 ATP5G2Q06055 141 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 ELOBQ15370 118 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 SPHARQ15513 63 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 LY6KQ17RY6 165 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 DMKNQ6E0U4 476 aaPredicted RBP2.92□□□□□ -1.94
UBR3-208ENST00000474426 C1QL2Q7Z5L3 287 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 OOSP2Q86WS3 158 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 GPD1LQ8N335 351 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 LINC00482Q8N8I6 264 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 OR5AK2Q8NH90 309 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 SLC25A46Q96AG3 418 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 SH3BGRL3Q9H299 93 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 Q9H8V8 135 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 MMP26Q9NRE1 261 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 TAS2R5Q9NYW4 299 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 SHPKQ9UHJ6 478 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 FUT9Q9Y231 359 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 ALPK3Q96L96 1907 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 DOCK6Q96HP0 2047 aa2.92□□□□□ -1.94
UBR3-208ENST00000474426 KIF26AQ9ULI4 1882 aaPredicted RBP2.91□□□□□ -1.94
UBR3-208ENST00000474426 A0A0A0MQY5 61 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 CXorf49A8MYA2 514 aaPredicted RBP2.91□□□□□ -1.94
UBR3-208ENST00000474426 H7C1C5 153 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 HYPMO75409 117 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 HRASP01112 189 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 KRASP01116 189 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 HBE1P02100 147 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 WT1P19544 449 aaPredicted RBP2.91□□□□□ -1.94
UBR3-208ENST00000474426 LMO1P25800 156 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 BTCP35070 178 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 GALR1P47211 349 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 CYP2J2P51589 502 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 PNRC1Q12796 327 aaPredicted RBP2.91□□□□□ -1.94
UBR3-208ENST00000474426 TCF15Q12870 199 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 PRR30Q53SZ7 412 aaPredicted RBP2.91□□□□□ -1.94
UBR3-208ENST00000474426 Q71RC1 249 aaPredicted RBP2.91□□□□□ -1.94
UBR3-208ENST00000474426 KRTCAP2Q8N6L1 136 aa2.91□□□□□ -1.94
UBR3-208ENST00000474426 ZNF548Q8NEK5 533 aaPredicted RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms