RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 ZIC4Q8N9L1 334 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 OR10P1Q8NGE3 313 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 OR51G1Q8NGK1 321 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 OR2T10Q8NGZ9 312 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 OR4C3Q8NH37 302 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 WBP2Q969T9 261 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 MRPL24Q96A35 216 aaKnown RBP6.23□□□□□ -1.41
GPNMB-209ENST00000474157 HPDLQ96IR7 371 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 RTBDNQ9BSG5 229 aaPredicted RBP6.23□□□□□ -1.41
GPNMB-209ENST00000474157 PIMREGQ9BSJ6 248 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 SAMD10Q9BYL1 202 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 GTSF1LQ9H1H1 148 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 SLC25A18Q9H1K4 315 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 EGLN3Q9H6Z9 239 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 GALPQ9UBC7 116 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 SS18L2Q9UHA2 77 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 PLAGL1Q9UM63 463 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 ICAM5Q9UMF0 924 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 BPTFQ12830 3046 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 ANK1P16157 1881 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 IGF2RP11717 2491 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 NLRC5Q86WI3 1866 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 HELZ2Q9BYK8 2649 aaKnown RBP6.22□□□□□ -1.41
GPNMB-209ENST00000474157 LOC102723971A0A1B0GUV8 181 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 A0A1W2PQM1 296 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 DAPL1A0PJW8 107 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 TSPAN11A1L157 253 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 H0YL77 283 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 H3BMH7 237 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 H3BRM9 83 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 K7N7A8 449 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 TAPBPO15533 448 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 PHF1O43189 567 aaPredicted RBP6.22□□□□□ -1.41
GPNMB-209ENST00000474157 UTS2O95399 124 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 SLC2A10O95528 541 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 CYB5AP00167 134 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 ISG15P05161 165 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 SERPINE2P07093 398 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 CRYGBP07316 175 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 HIST1H1TP22492 207 aaPredicted RBP6.22□□□□□ -1.41
GPNMB-209ENST00000474157 ACP1P24666 158 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 RPL12P30050 165 aaKnown RBP6.22□□□□□ -1.41
GPNMB-209ENST00000474157 KIR2DS4P43632 304 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 DNASE1L1P49184 302 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 MFAP4P55083 255 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 TAS2R46P59540 309 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 RND3P61587 244 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 ACVR1Q04771 509 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 IL15RAQ13261 267 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 LY6DQ14210 128 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 HLA-BQ31612 363 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 GGTA1PQ4G0N0 100 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 WDR25Q64LD2 544 aaPredicted RBP6.22□□□□□ -1.41
GPNMB-209ENST00000474157 SP5Q6BEB4 398 aaPredicted RBP6.22□□□□□ -1.41
GPNMB-209ENST00000474157 SMIM20Q8N5G0 67 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 SIGLECL1Q8N7X8 197 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 OR10Q1Q8NGQ4 319 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 OR4K13Q8NH42 304 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 IL17DQ8TAD2 202 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 SLC38A5Q8WUX1 472 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 TMEM37Q8WXS4 190 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 PP6455Q8WZ26 134 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 IL22RA2Q969J5 263 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 CLDN23Q96B33 292 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 SARAFQ96BY9 339 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 WDYHV1Q96HA8 205 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 GPR21Q99679 349 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 ST6GALNAC5Q9BVH7 336 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 SCNM1Q9BWG6 230 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 KRTAP4-8Q9BYQ9 185 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 NPFFR1Q9GZQ6 430 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 MED20Q9H944 212 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 CISD1Q9NZ45 108 aaKnown RBP6.22□□□□□ -1.41
GPNMB-209ENST00000474157 SH2B3Q9UQQ2 575 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 HS3ST2Q9Y278 367 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 HS3ST4Q9Y661 456 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 KIAA1671Q9BY89 1806 aa6.22□□□□□ -1.41
GPNMB-209ENST00000474157 TRAV9-2A0A087WT02 112 aa6.21□□□□□ -1.42
GPNMB-209ENST00000474157 TRBV9A0A0B4J1U6 114 aa6.21□□□□□ -1.42
GPNMB-209ENST00000474157 GAGE12JA6NER3 117 aa6.21□□□□□ -1.42
GPNMB-209ENST00000474157 ZNF736B4DX44 427 aaPredicted RBP6.21□□□□□ -1.42
GPNMB-209ENST00000474157 F8W1H4 67 aa6.21□□□□□ -1.42
GPNMB-209ENST00000474157 M0R129 80 aa6.21□□□□□ -1.42
GPNMB-209ENST00000474157 GAGE7O76087 117 aa6.21□□□□□ -1.42
GPNMB-209ENST00000474157 VENTXO95231 258 aa6.21□□□□□ -1.42
GPNMB-209ENST00000474157 CLDN1O95832 211 aa6.21□□□□□ -1.42
GPNMB-209ENST00000474157 NGFRP08138 427 aa6.21□□□□□ -1.42
GPNMB-209ENST00000474157 LINC00869P0C866 280 aa6.21□□□□□ -1.42
GPNMB-209ENST00000474157 GAGE12FP0CL80 117 aa6.21□□□□□ -1.42
GPNMB-209ENST00000474157 GAGE12GP0CL81 117 aa6.21□□□□□ -1.42
GPNMB-209ENST00000474157 GAGE12IP0CL82 117 aa6.21□□□□□ -1.42
GPNMB-209ENST00000474157 TNFRSF1BP20333 461 aa6.21□□□□□ -1.42
GPNMB-209ENST00000474157 CDK2P24941 298 aa6.21□□□□□ -1.42
GPNMB-209ENST00000474157 GALR1P47211 349 aa6.21□□□□□ -1.42
GPNMB-209ENST00000474157 SLC6A12P48065 614 aa6.21□□□□□ -1.42
GPNMB-209ENST00000474157 LHX2P50458 406 aa6.21□□□□□ -1.42
GPNMB-209ENST00000474157 RHOBP62745 196 aa6.21□□□□□ -1.42
GPNMB-209ENST00000474157 FUT7Q11130 342 aa6.21□□□□□ -1.42
GPNMB-209ENST00000474157 GAGE4Q13068 117 aa6.21□□□□□ -1.42
GPNMB-209ENST00000474157 RUNX3Q13761 415 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms