RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 SLC35G3Q8N808 338 aa15.01□□□□□ -0.01
VARS2-206ENST00000473916 OR8U1Q8NH10 309 aa15.01□□□□□ -0.01
VARS2-206ENST00000473916 OR51H1Q8NH63 302 aa15.01□□□□□ -0.01
VARS2-206ENST00000473916 LILRB1Q8NHL6 650 aaPredicted RBP15.01□□□□□ -0.01
VARS2-206ENST00000473916 Q8TCH9 128 aa15.01□□□□□ -0.01
VARS2-206ENST00000473916 RRNAD1Q96FB5 475 aaKnown RBP15.01□□□□□ -0.01
VARS2-206ENST00000473916 TMEM222Q9H0R3 208 aa15.01□□□□□ -0.01
VARS2-206ENST00000473916 IL2RGP31785 369 aa15□□□□□ -0.01
VARS2-206ENST00000473916 PPP1CCP36873 323 aaKnown RBP15□□□□□ -0.01
VARS2-206ENST00000473916 S100A10P60903 97 aa15□□□□□ -0.01
VARS2-206ENST00000473916 TFF3Q07654 80 aa15□□□□□ -0.01
VARS2-206ENST00000473916 LTC4SQ16873 150 aa15□□□□□ -0.01
VARS2-206ENST00000473916 TMEM268Q5VZI3 342 aa15□□□□□ -0.01
VARS2-206ENST00000473916 STUMQ69YW2 141 aa15□□□□□ -0.01
VARS2-206ENST00000473916 FAM185AQ8N0U4 392 aa15□□□□□ -0.01
VARS2-206ENST00000473916 LRTM2Q8N967 370 aa15□□□□□ -0.01
VARS2-206ENST00000473916 DCUN1D4Q92564 292 aa15□□□□□ -0.01
VARS2-206ENST00000473916 GALMQ96C23 342 aa15□□□□□ -0.01
VARS2-206ENST00000473916 SNX22Q96L94 193 aa15□□□□□ -0.01
VARS2-206ENST00000473916 KCNS2Q9ULS6 477 aa15□□□□□ -0.01
VARS2-206ENST00000473916 USF3Q68DE3 2245 aa15□□□□□ -0.01
VARS2-206ENST00000473916 K7N7A8 449 aa15□□□□□ -0.01
VARS2-206ENST00000473916 CD55P08174 381 aa15□□□□□ -0.01
VARS2-206ENST00000473916 ADH4P08319 380 aa15□□□□□ -0.01
VARS2-206ENST00000473916 LUMP51884 338 aaPredicted RBP15□□□□□ -0.01
VARS2-206ENST00000473916 CYCSP99999 105 aaKnown RBP15□□□□□ -0.01
VARS2-206ENST00000473916 LGI3Q8N145 548 aa15□□□□□ -0.01
VARS2-206ENST00000473916 FAM216BQ8N7L0 139 aa15□□□□□ -0.01
VARS2-206ENST00000473916 BVESQ8NE79 360 aa15□□□□□ -0.01
VARS2-206ENST00000473916 ARL11Q969Q4 196 aa15□□□□□ -0.01
VARS2-206ENST00000473916 CCL13Q99616 98 aa15□□□□□ -0.01
VARS2-206ENST00000473916 VRK1Q99986 396 aaPredicted RBP15□□□□□ -0.01
VARS2-206ENST00000473916 SAP30LQ9HAJ7 183 aa15□□□□□ -0.01
VARS2-206ENST00000473916 KCNJ16Q9NPI9 418 aa15□□□□□ -0.01
VARS2-206ENST00000473916 RNF150Q9ULK6 438 aa15□□□□□ -0.01
VARS2-206ENST00000473916 UBE2J1Q9Y385 318 aaPredicted RBP15□□□□□ -0.01
VARS2-206ENST00000473916 RBM7Q9Y580 266 aaKnown RBP15□□□□□ -0.01
VARS2-206ENST00000473916 ODAMA1E959 279 aa14.99□□□□□ -0.01
VARS2-206ENST00000473916 TUBAL3A6NHL2 446 aa14.99□□□□□ -0.01
VARS2-206ENST00000473916 MSGN1A6NI15 193 aa14.99□□□□□ -0.01
VARS2-206ENST00000473916 DEFB108AA8MXU0 73 aa14.99□□□□□ -0.01
VARS2-206ENST00000473916 C15orf65H3BRN8 121 aa14.99□□□□□ -0.01
VARS2-206ENST00000473916 IFNA21P01568 189 aa14.99□□□□□ -0.01
VARS2-206ENST00000473916 EDDM3BP56851 147 aa14.99□□□□□ -0.01
VARS2-206ENST00000473916 ZNF767PQ75MW2 155 aa14.99□□□□□ -0.01
VARS2-206ENST00000473916 C5orf30Q96GV9 206 aa14.99□□□□□ -0.01
VARS2-206ENST00000473916 GAFA1Q96PS6 74 aa14.99□□□□□ -0.01
VARS2-206ENST00000473916 USP24Q9UPU5 2620 aa14.99□□□□□ -0.01
VARS2-206ENST00000473916 TMEM8BA6NDV4 472 aa14.99□□□□□ -0.01
VARS2-206ENST00000473916 MGST3O14880 152 aa14.99□□□□□ -0.01
VARS2-206ENST00000473916 PLA2G5P39877 138 aa14.99□□□□□ -0.01
VARS2-206ENST00000473916 CMTM1Q8IZ96 169 aa14.99□□□□□ -0.01
VARS2-206ENST00000473916 OR52M1Q8NGK5 317 aa14.99□□□□□ -0.01
VARS2-206ENST00000473916 OR1S1Q8NH92 325 aa14.99□□□□□ -0.01
VARS2-206ENST00000473916 DYNLRB1Q9NP97 96 aa14.99□□□□□ -0.01
VARS2-206ENST00000473916 RNF115Q9Y4L5 304 aa14.99□□□□□ -0.01
VARS2-206ENST00000473916 SCGB1D2O95969 90 aa14.98□□□□□ -0.01
VARS2-206ENST00000473916 TNFRSF1AP19438 455 aa14.98□□□□□ -0.01
VARS2-206ENST00000473916 LOXP28300 417 aaPredicted RBP14.98□□□□□ -0.01
VARS2-206ENST00000473916 PAX5Q02548 391 aa14.98□□□□□ -0.01
VARS2-206ENST00000473916 UTF1Q5T230 341 aa14.98□□□□□ -0.01
VARS2-206ENST00000473916 C6orf183Q5T699 404 aa14.98□□□□□ -0.01
VARS2-206ENST00000473916 SELENOHQ8IZQ5 122 aaKnown RBP14.98□□□□□ -0.01
VARS2-206ENST00000473916 CISD1Q9NZ45 108 aaKnown RBP14.98□□□□□ -0.01
VARS2-206ENST00000473916 YLPM1P49750 1951 aaKnown RBP14.97□□□□□ -0.01
VARS2-206ENST00000473916 RP2O75695 350 aa14.97□□□□□ -0.01
VARS2-206ENST00000473916 GNLYP22749 145 aa14.97□□□□□ -0.01
VARS2-206ENST00000473916 OMGP23515 440 aa14.97□□□□□ -0.01
VARS2-206ENST00000473916 F2RP25116 425 aa14.97□□□□□ -0.01
VARS2-206ENST00000473916 KCNRGQ8N5I3 272 aa14.97□□□□□ -0.01
VARS2-206ENST00000473916 DRAM1Q8N682 238 aa14.97□□□□□ -0.01
VARS2-206ENST00000473916 ERGIC1Q969X5 290 aa14.97□□□□□ -0.01
VARS2-206ENST00000473916 LURAP1Q96LR2 239 aa14.97□□□□□ -0.01
VARS2-206ENST00000473916 TMEM56Q96MV1 263 aa14.97□□□□□ -0.01
VARS2-206ENST00000473916 DIRC2Q96SL1 478 aa14.97□□□□□ -0.01
VARS2-206ENST00000473916 OR2S2Q9NQN1 319 aa14.97□□□□□ -0.01
VARS2-206ENST00000473916 TMEM56-RWDD3S4R434 201 aa14.97□□□□□ -0.01
VARS2-206ENST00000473916 IRF2P14316 349 aa14.97□□□□□ -0.01
VARS2-206ENST00000473916 UCP1P25874 307 aa14.97□□□□□ -0.01
VARS2-206ENST00000473916 APOBEC3AP31941 199 aaPredicted RBP14.97□□□□□ -0.01
VARS2-206ENST00000473916 P2RX3P56373 397 aa14.97□□□□□ -0.01
VARS2-206ENST00000473916 PRSS54Q6PEW0 395 aa14.97□□□□□ -0.01
VARS2-206ENST00000473916 ACOT7LQ6ZUV0 252 aa14.97□□□□□ -0.01
VARS2-206ENST00000473916 OR8H3Q8N146 312 aa14.97□□□□□ -0.01
VARS2-206ENST00000473916 CCL17Q92583 94 aa14.97□□□□□ -0.01
VARS2-206ENST00000473916 SDSLQ96GA7 329 aa14.97□□□□□ -0.01
VARS2-206ENST00000473916 OR2D2Q9H210 308 aa14.97□□□□□ -0.01
VARS2-206ENST00000473916 SEBOXQ9HB31 216 aaPredicted RBP14.97□□□□□ -0.01
VARS2-206ENST00000473916 LSM5Q9Y4Y9 91 aaKnown RBP14.97□□□□□ -0.01
VARS2-206ENST00000473916 H0Y980 276 aa14.96□□□□□ -0.01
VARS2-206ENST00000473916 ZG16O60844 167 aa14.96□□□□□ -0.01
VARS2-206ENST00000473916 SPDEFO95238 335 aa14.96□□□□□ -0.01
VARS2-206ENST00000473916 CDS2O95674 445 aa14.96□□□□□ -0.01
VARS2-206ENST00000473916 IGHV3-7P01780 117 aa14.96□□□□□ -0.01
VARS2-206ENST00000473916 MBPP02686 304 aaPredicted RBP14.96□□□□□ -0.01
VARS2-206ENST00000473916 ZNF345Q14585 488 aa14.96□□□□□ -0.01
VARS2-206ENST00000473916 TEX36Q5VZQ5 186 aa14.96□□□□□ -0.01
VARS2-206ENST00000473916 ZNF695Q8IW36 515 aa14.96□□□□□ -0.01
VARS2-206ENST00000473916 ZNF808Q8N4W9 903 aaPredicted RBP14.96□□□□□ -0.01
VARS2-206ENST00000473916 ZNF561Q8N587 486 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms