RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 ZNF485Q8NCK3 441 aa9.39□□□□□ -0.91
SMPD4-217ENST00000473720 ZNF439Q8NDP4 499 aa9.39□□□□□ -0.91
SMPD4-217ENST00000473720 ST6GALNAC6Q969X2 333 aa9.39□□□□□ -0.91
SMPD4-217ENST00000473720 MRPS24Q96EL2 167 aaKnown RBP9.39□□□□□ -0.91
SMPD4-217ENST00000473720 MCRIP2Q9BUT9 160 aaKnown RBP9.39□□□□□ -0.91
SMPD4-217ENST00000473720 GON7Q9BXV9 100 aa9.39□□□□□ -0.91
SMPD4-217ENST00000473720 DCLRE1BQ9H816 532 aa9.39□□□□□ -0.91
SMPD4-217ENST00000473720 KCNIP1Q9NZI2 227 aa9.39□□□□□ -0.91
SMPD4-217ENST00000473720 RCC2Q9P258 522 aaKnown RBP9.39□□□□□ -0.91
SMPD4-217ENST00000473720 TXNL1O43396 289 aa9.38□□□□□ -0.91
SMPD4-217ENST00000473720 SOX6P35712 828 aa9.38□□□□□ -0.91
SMPD4-217ENST00000473720 PPP1CCP36873 323 aaKnown RBP9.38□□□□□ -0.91
SMPD4-217ENST00000473720 GABPB1Q06547 395 aaPredicted RBP9.38□□□□□ -0.91
SMPD4-217ENST00000473720 EGFEM1PQ0D2K5 195 aa9.38□□□□□ -0.91
SMPD4-217ENST00000473720 MMDQ15546 238 aa9.38□□□□□ -0.91
SMPD4-217ENST00000473720 MORN2Q502X0 79 aa9.38□□□□□ -0.91
SMPD4-217ENST00000473720 FAM27D1Q5T7N8 215 aa9.38□□□□□ -0.91
SMPD4-217ENST00000473720 SIGIRRQ6IA17 410 aa9.38□□□□□ -0.91
SMPD4-217ENST00000473720 OR10K2Q6IF99 312 aa9.38□□□□□ -0.91
SMPD4-217ENST00000473720 LAIR2Q6ISS4 152 aa9.38□□□□□ -0.91
SMPD4-217ENST00000473720 TRAT1Q6PIZ9 186 aa9.38□□□□□ -0.91
SMPD4-217ENST00000473720 PACRGLQ8N7B6 248 aa9.38□□□□□ -0.91
SMPD4-217ENST00000473720 C8orf31Q8N9H6 132 aa9.38□□□□□ -0.91
SMPD4-217ENST00000473720 Q96M66 194 aa9.38□□□□□ -0.91
SMPD4-217ENST00000473720 P2RX4Q99571 388 aa9.38□□□□□ -0.91
SMPD4-217ENST00000473720 TMED9Q9BVK6 235 aa9.38□□□□□ -0.91
SMPD4-217ENST00000473720 KCNK15Q9H427 330 aa9.38□□□□□ -0.91
SMPD4-217ENST00000473720 PLSCR3Q9NRY6 295 aa9.38□□□□□ -0.91
SMPD4-217ENST00000473720 CNOT2Q9NZN8 540 aaKnown RBP9.38□□□□□ -0.91
SMPD4-217ENST00000473720 PSORS1C1Q9UIG5 152 aa9.38□□□□□ -0.91
SMPD4-217ENST00000473720 ERGIC3Q9Y282 383 aa9.38□□□□□ -0.91
SMPD4-217ENST00000473720 DNAH3Q8TD57 4116 aa9.38□□□□□ -0.91
SMPD4-217ENST00000473720 PDCD6O75340 191 aa9.37□□□□□ -0.91
SMPD4-217ENST00000473720 CNTFRP26992 372 aa9.37□□□□□ -0.91
SMPD4-217ENST00000473720 MAPK3P27361 379 aaPredicted RBP9.37□□□□□ -0.91
SMPD4-217ENST00000473720 LUMP51884 338 aaPredicted RBP9.37□□□□□ -0.91
SMPD4-217ENST00000473720 LSAMPQ13449 338 aa9.37□□□□□ -0.91
SMPD4-217ENST00000473720 Q3ZCU0 254 aa9.37□□□□□ -0.91
SMPD4-217ENST00000473720 RBM48Q5RL73 367 aaKnown RBP9.37□□□□□ -0.91
SMPD4-217ENST00000473720 NANOGP1Q8N7R0 232 aa9.37□□□□□ -0.91
SMPD4-217ENST00000473720 NKAIN3Q8N8D7 197 aa9.37□□□□□ -0.91
SMPD4-217ENST00000473720 SETD6Q8TBK2 473 aa9.37□□□□□ -0.91
SMPD4-217ENST00000473720 MRPL30Q8TCC3 161 aaKnown RBP9.37□□□□□ -0.91
SMPD4-217ENST00000473720 IL1F10Q8WWZ1 152 aa9.37□□□□□ -0.91
SMPD4-217ENST00000473720 NEDD4LQ96PU5 975 aa9.37□□□□□ -0.91
SMPD4-217ENST00000473720 ABHD14AQ9BUJ0 271 aa9.37□□□□□ -0.91
SMPD4-217ENST00000473720 MRPL20Q9BYC9 149 aaKnown RBP9.37□□□□□ -0.91
SMPD4-217ENST00000473720 C8orf4Q9NR00 106 aa9.37□□□□□ -0.91
SMPD4-217ENST00000473720 ZNF107Q9UII5 783 aaPredicted RBP9.37□□□□□ -0.91
SMPD4-217ENST00000473720 WSB1Q9Y6I7 421 aa9.37□□□□□ -0.91
SMPD4-217ENST00000473720 SORL1Q92673 2214 aa9.36□□□□□ -0.91
SMPD4-217ENST00000473720 FAM90A10PA6NDY2 464 aa9.36□□□□□ -0.91
SMPD4-217ENST00000473720 FAM90A7PA6NKC0 464 aa9.36□□□□□ -0.91
SMPD4-217ENST00000473720 FAM90A23PA8MXZ1 464 aa9.36□□□□□ -0.91
SMPD4-217ENST00000473720 PTGES3LE9PB15 166 aa9.36□□□□□ -0.91
SMPD4-217ENST00000473720 SLC6A1P30531 599 aa9.36□□□□□ -0.91
SMPD4-217ENST00000473720 OR3A3P47888 321 aa9.36□□□□□ -0.91
SMPD4-217ENST00000473720 DGCR2P98153 550 aa9.36□□□□□ -0.91
SMPD4-217ENST00000473720 FOXE3Q13461 319 aa9.36□□□□□ -0.91
SMPD4-217ENST00000473720 TMEM30BQ3MIR4 351 aa9.36□□□□□ -0.91
SMPD4-217ENST00000473720 ACSM3Q53FZ2 586 aa9.36□□□□□ -0.91
SMPD4-217ENST00000473720 C6orf201Q7Z4U5 140 aa9.36□□□□□ -0.91
SMPD4-217ENST00000473720 CDH26Q8IXH8 852 aa9.36□□□□□ -0.91
SMPD4-217ENST00000473720 FAM71E2Q8N5Q1 922 aa9.36□□□□□ -0.91
SMPD4-217ENST00000473720 OR5M8Q8NGP6 311 aa9.36□□□□□ -0.91
SMPD4-217ENST00000473720 OR8U1Q8NH10 309 aa9.36□□□□□ -0.91
SMPD4-217ENST00000473720 KCTD7Q96MP8 289 aa9.36□□□□□ -0.91
SMPD4-217ENST00000473720 OR5B12Q96R08 314 aa9.36□□□□□ -0.91
SMPD4-217ENST00000473720 PRR25Q96S07 402 aa9.36□□□□□ -0.91
SMPD4-217ENST00000473720 SULT4A1Q9BR01 284 aa9.36□□□□□ -0.91
SMPD4-217ENST00000473720 ZNF251Q9BRH9 671 aa9.36□□□□□ -0.91
SMPD4-217ENST00000473720 UQCC2Q9BRT2 126 aa9.36□□□□□ -0.91
SMPD4-217ENST00000473720 FAAP24Q9BTP7 215 aa9.36□□□□□ -0.91
SMPD4-217ENST00000473720 CST11Q9H112 138 aa9.36□□□□□ -0.91
SMPD4-217ENST00000473720 CHMP1AQ9HD42 196 aaPredicted RBP9.36□□□□□ -0.91
SMPD4-217ENST00000473720 PARP11Q9NR21 331 aa9.36□□□□□ -0.91
SMPD4-217ENST00000473720 ANKRD65E5RJM6 399 aa9.35□□□□□ -0.91
SMPD4-217ENST00000473720 G3V318 75 aa9.35□□□□□ -0.91
SMPD4-217ENST00000473720 H0YHG0 523 aa9.35□□□□□ -0.91
SMPD4-217ENST00000473720 LANCL1O43813 399 aa9.35□□□□□ -0.91
SMPD4-217ENST00000473720 CA11O75493 328 aa9.35□□□□□ -0.91
SMPD4-217ENST00000473720 SC5DO75845 299 aa9.35□□□□□ -0.91
SMPD4-217ENST00000473720 ELANEP08246 267 aa9.35□□□□□ -0.91
SMPD4-217ENST00000473720 ECI1P42126 302 aa9.35□□□□□ -0.91
SMPD4-217ENST00000473720 CDX1P47902 265 aaPredicted RBP9.35□□□□□ -0.91
SMPD4-217ENST00000473720 ZNF137PP52743 207 aa9.35□□□□□ -0.91
SMPD4-217ENST00000473720 ACTBP60709 375 aa9.35□□□□□ -0.91
SMPD4-217ENST00000473720 COL7A1Q02388 2944 aa9.35□□□□□ -0.91
SMPD4-217ENST00000473720 MED22Q15528 200 aa9.35□□□□□ -0.91
SMPD4-217ENST00000473720 GLT8D1Q68CQ7 371 aa9.35□□□□□ -0.91
SMPD4-217ENST00000473720 TMEM65Q6PI78 240 aa9.35□□□□□ -0.91
SMPD4-217ENST00000473720 LYPD6Q86Y78 171 aa9.35□□□□□ -0.91
SMPD4-217ENST00000473720 ODF3L1Q8IXM7 274 aa9.35□□□□□ -0.91
SMPD4-217ENST00000473720 OR8H1Q8NGG4 311 aa9.35□□□□□ -0.91
SMPD4-217ENST00000473720 THRSPQ92748 146 aa9.35□□□□□ -0.91
SMPD4-217ENST00000473720 GALMQ96C23 342 aa9.35□□□□□ -0.91
SMPD4-217ENST00000473720 RITA1Q96K30 269 aa9.35□□□□□ -0.91
SMPD4-217ENST00000473720 NICN1Q9BSH3 213 aa9.35□□□□□ -0.91
SMPD4-217ENST00000473720 TMEM59Q9BXS4 323 aa9.35□□□□□ -0.91
SMPD4-217ENST00000473720 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms