RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 PAX9P55771 341 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 GNG3P63215 75 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 RPP30P78346 268 aaKnown RBP5.24□□□□□ -1.57
HERC4-209ENST00000473533 ZNF880Q6PDB4 577 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 LCN15Q6UWW0 184 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 NANOS1Q8WY41 292 aaKnown RBP5.24□□□□□ -1.57
HERC4-209ENST00000473533 TAF15Q92804 592 aaKnown RBP eCLIP5.24□□□□□ -1.57
HERC4-209ENST00000473533 GMPPAQ96IJ6 420 aaPredicted RBP5.24□□□□□ -1.57
HERC4-209ENST00000473533 IMMP1LQ96LU5 166 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 ABHD14AQ9BUJ0 271 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 REPIN1Q9BWE0 567 aaKnown RBP5.24□□□□□ -1.57
HERC4-209ENST00000473533 KCNIP2Q9NS61 270 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 GAB2Q9UQC2 676 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 TRAV9-1A0A075B6T8 112 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 IGHV5-10-1A0A0J9YXX1 117 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 XKRY2A2RUG3 117 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 F6UZH7 168 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 PDE6DO43924 150 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 MRPL33O75394 65 aaKnown RBP5.24□□□□□ -1.57
HERC4-209ENST00000473533 CCL3P10147 92 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 PAX1P15863 534 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 PDLIM4P50479 330 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 SLC38A11Q08AI6 406 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 USF2Q15853 346 aaPredicted RBP5.24□□□□□ -1.57
HERC4-209ENST00000473533 DMRTC1Q5HYR2 192 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 SPEM1Q8N4L4 309 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 OR56B2PQ8NGI1 322 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 OR2T10Q8NGZ9 312 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 ABHD5Q8WTS1 349 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 FAM216AQ8WUB2 273 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 ADGRG7Q96K78 797 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 SNX22Q96L94 193 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 ZNF665Q9H7R5 613 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 B4GALT7Q9UBV7 327 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 BOKQ9UMX3 212 aaPredicted RBP5.24□□□□□ -1.57
HERC4-209ENST00000473533 POLDIP2Q9Y2S7 368 aa5.24□□□□□ -1.57
HERC4-209ENST00000473533 MED19A0JLT2 244 aaPredicted RBP5.23□□□□□ -1.57
HERC4-209ENST00000473533 SCTP09683 121 aa5.23□□□□□ -1.57
HERC4-209ENST00000473533 PGA5P0DJD9 388 aa5.23□□□□□ -1.57
HERC4-209ENST00000473533 ANOS1P23352 680 aa5.23□□□□□ -1.57
HERC4-209ENST00000473533 EPHA8P29322 1005 aaPredicted RBP5.23□□□□□ -1.57
HERC4-209ENST00000473533 RANP62826 216 aaKnown RBP5.23□□□□□ -1.57
HERC4-209ENST00000473533 TMEM267Q0VDI3 215 aaPredicted RBP5.23□□□□□ -1.57
HERC4-209ENST00000473533 CLN3Q13286 438 aa5.23□□□□□ -1.57
HERC4-209ENST00000473533 SLC10A1Q14973 349 aa5.23□□□□□ -1.57
HERC4-209ENST00000473533 WDR25Q64LD2 544 aaPredicted RBP5.23□□□□□ -1.57
HERC4-209ENST00000473533 ZNF324BQ6AW86 544 aaPredicted RBP5.23□□□□□ -1.57
HERC4-209ENST00000473533 OR4X1Q8NH49 305 aa5.23□□□□□ -1.57
HERC4-209ENST00000473533 NEIL1Q96FI4 390 aaPredicted RBP5.23□□□□□ -1.57
HERC4-209ENST00000473533 SRXN1Q9BYN0 137 aa5.23□□□□□ -1.57
HERC4-209ENST00000473533 KCNIP1Q9NZI2 227 aa5.23□□□□□ -1.57
HERC4-209ENST00000473533 CACNG5Q9UF02 275 aa5.23□□□□□ -1.57
HERC4-209ENST00000473533 FRYQ5TBA9 3013 aa5.23□□□□□ -1.57
HERC4-209ENST00000473533 PFN1P07737 140 aaKnown RBP5.23□□□□□ -1.57
HERC4-209ENST00000473533 MMP7P09237 267 aaPredicted RBP5.23□□□□□ -1.57
HERC4-209ENST00000473533 COX6A1P12074 109 aa5.23□□□□□ -1.57
HERC4-209ENST00000473533 EN2P19622 333 aaPredicted RBP5.23□□□□□ -1.57
HERC4-209ENST00000473533 LTBRP36941 435 aa5.23□□□□□ -1.57
HERC4-209ENST00000473533 CCL7P80098 99 aa5.23□□□□□ -1.57
HERC4-209ENST00000473533 TMEM249Q2WGJ8 235 aa5.23□□□□□ -1.57
HERC4-209ENST00000473533 BRICD5Q6PL45 260 aa5.23□□□□□ -1.57
HERC4-209ENST00000473533 C16orf82Q7Z2V1 217 aa5.23□□□□□ -1.57
HERC4-209ENST00000473533 CALHM1Q8IU99 346 aa5.23□□□□□ -1.57
HERC4-209ENST00000473533 FAM58AQ8N1B3 248 aa5.23□□□□□ -1.57
HERC4-209ENST00000473533 AGBL5Q8NDL9 886 aa5.23□□□□□ -1.57
HERC4-209ENST00000473533 OR2Y1Q8NGV0 311 aa5.23□□□□□ -1.57
HERC4-209ENST00000473533 OR51H1Q8NH63 302 aa5.23□□□□□ -1.57
HERC4-209ENST00000473533 MRPL30Q8TCC3 161 aaKnown RBP5.23□□□□□ -1.57
HERC4-209ENST00000473533 ALKBH3Q96Q83 286 aaPredicted RBP5.23□□□□□ -1.57
HERC4-209ENST00000473533 OR14J1Q9UGF5 321 aa5.23□□□□□ -1.57
HERC4-209ENST00000473533 IGKV3D-15A0A087WSY6 115 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 J3QT63 122 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 CXCL13O43927 109 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 TMEM50AO95807 157 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 RAC2P15153 192 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 TRIM61Q5EBN2 209 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 ZNF66Q6ZN08 573 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 NAXEQ8NCW5 288 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 OR10P1Q8NGE3 313 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 ZNF845Q96IR2 970 aaPredicted RBP5.22□□□□□ -1.57
HERC4-209ENST00000473533 IER2Q9BTL4 223 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 RTL8AQ9BWD3 113 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 PHF7Q9BWX1 381 aaPredicted RBP5.22□□□□□ -1.57
HERC4-209ENST00000473533 ERRFI1Q9UJM3 462 aaPredicted RBP5.22□□□□□ -1.57
HERC4-209ENST00000473533 WASF3Q9UPY6 502 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 MED12Q93074 2177 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 IGKV1D-13A0A0B4J2D9 117 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 PHOX2AO14813 284 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 ZNF205O95201 554 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 RD3LP0DJH9 198 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 IGKV1-13P0DP09 117 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 PSG2P11465 335 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 EDN3P14138 238 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 GPM6AP51674 278 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 MRPL49Q13405 166 aaKnown RBP5.22□□□□□ -1.57
HERC4-209ENST00000473533 IGFBP7Q16270 282 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 PDZD11Q5EBL8 140 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 BTNL3Q6UXE8 466 aa5.22□□□□□ -1.57
HERC4-209ENST00000473533 MRPL41Q8IXM3 137 aaKnown RBP5.22□□□□□ -1.57
HERC4-209ENST00000473533 WDR31Q8NA23 367 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms