RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 A0A1W2PR64 198 aa10.6□□□□□ -0.71
TPM3-216ENST00000473036 A0A1W2PRV1 198 aa10.6□□□□□ -0.71
TPM3-216ENST00000473036 C12orf77C9JDV5 145 aa10.6□□□□□ -0.71
TPM3-216ENST00000473036 IGHV3-7P01780 117 aa10.6□□□□□ -0.71
TPM3-216ENST00000473036 CD34P28906 385 aa10.6□□□□□ -0.71
TPM3-216ENST00000473036 BLVRBP30043 206 aaPredicted RBP10.6□□□□□ -0.71
TPM3-216ENST00000473036 TNFSF8P32971 234 aa10.6□□□□□ -0.71
TPM3-216ENST00000473036 VEGFCP49767 419 aa10.6□□□□□ -0.71
TPM3-216ENST00000473036 FOXL1Q12952 345 aa10.6□□□□□ -0.71
TPM3-216ENST00000473036 LTC4SQ16873 150 aa10.6□□□□□ -0.71
TPM3-216ENST00000473036 PNLIPRP3Q17RR3 467 aa10.6□□□□□ -0.71
TPM3-216ENST00000473036 AWAT1Q58HT5 328 aa10.6□□□□□ -0.71
TPM3-216ENST00000473036 PYHIN1Q6K0P9 492 aa10.6□□□□□ -0.71
TPM3-216ENST00000473036 ABHD12Q8N2K0 398 aa10.6□□□□□ -0.71
TPM3-216ENST00000473036 ZNF565Q8N9K5 539 aa10.6□□□□□ -0.71
TPM3-216ENST00000473036 BEND2Q8NDZ0 799 aa10.6□□□□□ -0.71
TPM3-216ENST00000473036 OR13D1Q8NGV5 346 aa10.6□□□□□ -0.71
TPM3-216ENST00000473036 OR5H6Q8NGV6 325 aa10.6□□□□□ -0.71
TPM3-216ENST00000473036 NEK7Q8TDX7 302 aa10.6□□□□□ -0.71
TPM3-216ENST00000473036 ZDHHC16Q969W1 377 aa10.6□□□□□ -0.71
TPM3-216ENST00000473036 ARHGAP5-AS1Q96IT6 56 aa10.6□□□□□ -0.71
TPM3-216ENST00000473036 HDHD3Q9BSH5 251 aaPredicted RBP10.6□□□□□ -0.71
TPM3-216ENST00000473036 GAL3ST2Q9H3Q3 398 aa10.6□□□□□ -0.71
TPM3-216ENST00000473036 IDI2-AS1Q9NZ38 188 aa10.6□□□□□ -0.71
TPM3-216ENST00000473036 KCNK7Q9Y2U2 307 aa10.6□□□□□ -0.71
TPM3-216ENST00000473036 SULT1C2O00338 296 aa10.59□□□□□ -0.71
TPM3-216ENST00000473036 FBP1P09467 338 aa10.59□□□□□ -0.71
TPM3-216ENST00000473036 ELK1P19419 428 aa10.59□□□□□ -0.71
TPM3-216ENST00000473036 CBX5P45973 191 aa10.59□□□□□ -0.71
TPM3-216ENST00000473036 RAB13P51153 203 aa10.59□□□□□ -0.71
TPM3-216ENST00000473036 LOXL3P58215 753 aa10.59□□□□□ -0.71
TPM3-216ENST00000473036 RELBQ01201 579 aa10.59□□□□□ -0.71
TPM3-216ENST00000473036 ZNF880Q6PDB4 577 aa10.59□□□□□ -0.71
TPM3-216ENST00000473036 RBMS3Q6XE24 437 aaKnown RBP10.59□□□□□ -0.71
TPM3-216ENST00000473036 OR1L1Q8NH94 360 aa10.59□□□□□ -0.71
TPM3-216ENST00000473036 CLEC7AQ9BXN2 247 aa10.59□□□□□ -0.71
TPM3-216ENST00000473036 WDR12Q9GZL7 423 aaKnown RBP10.59□□□□□ -0.71
TPM3-216ENST00000473036 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.59□□□□□ -0.71
TPM3-216ENST00000473036 MBNL3Q9NUK0 354 aaKnown RBP10.59□□□□□ -0.71
TPM3-216ENST00000473036 EXTL2Q9UBQ6 330 aa10.59□□□□□ -0.71
TPM3-216ENST00000473036 AK3Q9UIJ7 227 aa10.59□□□□□ -0.71
TPM3-216ENST00000473036 MGAT4AQ9UM21 535 aa10.59□□□□□ -0.71
TPM3-216ENST00000473036 IGHV3-43A0A0B4J1X8 118 aa10.58□□□□□ -0.72
TPM3-216ENST00000473036 LY6LH3BQJ8 138 aa10.58□□□□□ -0.72
TPM3-216ENST00000473036 RAB27BO00194 218 aa10.58□□□□□ -0.72
TPM3-216ENST00000473036 F2RL2O00254 374 aa10.58□□□□□ -0.72
TPM3-216ENST00000473036 NAPSAO96009 420 aa10.58□□□□□ -0.72
TPM3-216ENST00000473036 IGHV3-43DP0DP04 118 aa10.58□□□□□ -0.72
TPM3-216ENST00000473036 NFYBP25208 207 aa10.58□□□□□ -0.72
TPM3-216ENST00000473036 DIAPH2-AS1Q14236 149 aa10.58□□□□□ -0.72
TPM3-216ENST00000473036 CDNFQ49AH0 187 aa10.58□□□□□ -0.72
TPM3-216ENST00000473036 PLA1AQ53H76 456 aa10.58□□□□□ -0.72
TPM3-216ENST00000473036 CNIH2Q6PI25 160 aa10.58□□□□□ -0.72
TPM3-216ENST00000473036 CCDC190Q86UF4 302 aa10.58□□□□□ -0.72
TPM3-216ENST00000473036 LAX1Q8IWV1 398 aa10.58□□□□□ -0.72
TPM3-216ENST00000473036 TMEM86BQ8N661 226 aa10.58□□□□□ -0.72
TPM3-216ENST00000473036 SSMEM1Q8WWF3 244 aa10.58□□□□□ -0.72
TPM3-216ENST00000473036 ARL11Q969Q4 196 aa10.58□□□□□ -0.72
TPM3-216ENST00000473036 SLC25A38Q96DW6 304 aa10.58□□□□□ -0.72
TPM3-216ENST00000473036 TSC22D3Q99576 134 aa10.58□□□□□ -0.72
TPM3-216ENST00000473036 PECRQ9BY49 303 aa10.58□□□□□ -0.72
TPM3-216ENST00000473036 ZMAT3Q9HA38 289 aaKnown RBP10.58□□□□□ -0.72
TPM3-216ENST00000473036 SCPEP1Q9HB40 452 aa10.58□□□□□ -0.72
TPM3-216ENST00000473036 RAB9BQ9NP90 201 aa10.58□□□□□ -0.72
TPM3-216ENST00000473036 ELF5Q9UKW6 265 aaPredicted RBP10.58□□□□□ -0.72
TPM3-216ENST00000473036 PSG11Q9UQ72 335 aa10.58□□□□□ -0.72
TPM3-216ENST00000473036 FAM96BQ9Y3D0 163 aa10.58□□□□□ -0.72
TPM3-216ENST00000473036 TRAV18A0A075B6X5 111 aa10.57□□□□□ -0.72
TPM3-216ENST00000473036 A0A1W2PPE3 182 aa10.57□□□□□ -0.72
TPM3-216ENST00000473036 FAM181BA6NEQ2 426 aa10.57□□□□□ -0.72
TPM3-216ENST00000473036 CTDSPLO15194 276 aa10.57□□□□□ -0.72
TPM3-216ENST00000473036 SLC31A2O15432 143 aa10.57□□□□□ -0.72
TPM3-216ENST00000473036 ORC5O43913 435 aa10.57□□□□□ -0.72
TPM3-216ENST00000473036 HBZP02008 142 aa10.57□□□□□ -0.72
TPM3-216ENST00000473036 EIF4EP06730 217 aaKnown RBP10.57□□□□□ -0.72
TPM3-216ENST00000473036 HIST1H1DP16402 221 aaKnown RBP10.57□□□□□ -0.72
TPM3-216ENST00000473036 GZMHP20718 246 aa10.57□□□□□ -0.72
TPM3-216ENST00000473036 PRSS3P35030 304 aa10.57□□□□□ -0.72
TPM3-216ENST00000473036 SSBP1Q04837 148 aaKnown RBP10.57□□□□□ -0.72
TPM3-216ENST00000473036 IL18Q14116 193 aa10.57□□□□□ -0.72
TPM3-216ENST00000473036 ZNF846Q147U1 533 aa10.57□□□□□ -0.72
TPM3-216ENST00000473036 SSX2Q16385 188 aa10.57□□□□□ -0.72
TPM3-216ENST00000473036 HACD4Q5VWC8 232 aa10.57□□□□□ -0.72
TPM3-216ENST00000473036 C16orf87Q6PH81 154 aa10.57□□□□□ -0.72
TPM3-216ENST00000473036 FAM131AQ6UXB0 335 aa10.57□□□□□ -0.72
TPM3-216ENST00000473036 CCBE1Q6UXH8 406 aaPredicted RBP10.57□□□□□ -0.72
TPM3-216ENST00000473036 GDPD1Q8N9F7 314 aa10.57□□□□□ -0.72
TPM3-216ENST00000473036 SSX3Q99909 188 aa10.57□□□□□ -0.72
TPM3-216ENST00000473036 MIXL1Q9H2W2 232 aa10.57□□□□□ -0.72
TPM3-216ENST00000473036 TAF9BQ9HBM6 251 aa10.57□□□□□ -0.72
TPM3-216ENST00000473036 GFOD1Q9NXC2 390 aa10.57□□□□□ -0.72
TPM3-216ENST00000473036 TBL2Q9Y4P3 447 aaKnown RBP10.57□□□□□ -0.72
TPM3-216ENST00000473036 HILPDAQ9Y5L2 63 aa10.57□□□□□ -0.72
TPM3-216ENST00000473036 POMT1Q9Y6A1 747 aa10.57□□□□□ -0.72
TPM3-216ENST00000473036 BUB1B-PAK6H3BSN5 160 aa10.56□□□□□ -0.72
TPM3-216ENST00000473036 H3BUX3 64 aa10.56□□□□□ -0.72
TPM3-216ENST00000473036 J3QR06 171 aa10.56□□□□□ -0.72
TPM3-216ENST00000473036 CD3GP09693 182 aa10.56□□□□□ -0.72
TPM3-216ENST00000473036 HKR1P10072 659 aa10.56□□□□□ -0.72
TPM3-216ENST00000473036 CD40LGP29965 261 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms