RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 CLEC12AQ5QGZ9 265 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 C1orf194Q5T5A4 169 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 TEX36Q5VZQ5 186 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 ZFAND6Q6FIF0 208 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 LAMTOR1Q6IAA8 161 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 TBPL2Q6SJ96 375 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 WDR82Q6UXN9 313 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 ACP7Q6ZNF0 438 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 COMMD7Q86VX2 200 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 KRTAP13-1Q8IUC0 172 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 PDZD9Q8IXQ8 264 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 C9orf62Q8N4C0 152 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 C12orf45Q8N5I9 185 aaPredicted RBP2.3□□□□□ -2.04
CD46-213ENST00000471987 SPICQ8N5J4 248 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 OR8G5Q8NG78 346 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 OR4E2Q8NGC2 313 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 OR10G4Q8NGN3 311 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 OR1L8Q8NGR8 309 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 MCFD2Q8NI22 146 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 SLC7A13Q8TCU3 470 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 GNPDA2Q8TDQ7 276 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 GPR119Q8TDV5 335 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 ORAOV1Q8WV07 137 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 CANT1Q8WVQ1 401 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 ASB13Q8WXK3 278 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 ACOT12Q8WYK0 555 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 ROPN1LQ96C74 230 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 ZNF681Q96N22 645 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 GPER1Q99527 375 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 P2RX4Q99571 388 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 KLF6Q99612 283 aaPredicted RBP2.3□□□□□ -2.04
CD46-213ENST00000471987 FOXC2Q99958 501 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 RASL11BQ9BPW5 248 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 SULT4A1Q9BR01 284 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 MARVELD1Q9BSK0 173 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 TMEM126AQ9H061 195 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 MS4A6AQ9H2W1 248 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 SLC25A22Q9H936 323 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 COMMD9Q9P000 198 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 METTL1Q9UBP6 276 aaKnown RBP2.3□□□□□ -2.04
CD46-213ENST00000471987 RSL24D1Q9UHA3 163 aaKnown RBP2.3□□□□□ -2.04
CD46-213ENST00000471987 SCP2D1Q9UJQ7 156 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 PYCARDQ9ULZ3 195 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 SSR3Q9UNL2 185 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 CARHSP1Q9Y2V2 147 aaKnown RBP2.3□□□□□ -2.04
CD46-213ENST00000471987 UTP11Q9Y3A2 253 aaKnown RBP2.3□□□□□ -2.04
CD46-213ENST00000471987 ABCC12Q96J65 1359 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 PIK3C2GO75747 1445 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 NOS1P29475 1434 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 ABCC10Q5T3U5 1492 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 BCL9LQ86UU0 1499 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 INO80Q9ULG1 1556 aaPredicted RBP2.3□□□□□ -2.04
CD46-213ENST00000471987 KIF20BQ96Q89 1820 aa2.3□□□□□ -2.04
CD46-213ENST00000471987 PHLPP1O60346 1717 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 ADAMTSL3P82987 1691 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 WDR62O43379 1518 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 POLA1P09884 1462 aaPredicted RBP2.29□□□□□ -2.04
CD46-213ENST00000471987 TCOF1Q13428 1488 aaKnown RBP2.29□□□□□ -2.04
CD46-213ENST00000471987 TROQ12816 1431 aaPredicted RBP2.29□□□□□ -2.04
CD46-213ENST00000471987 IGHV2-70DA0A0C4DH43 119 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 A0A0X1KG70 313 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 A0A1B0GW55 424 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 GMNCA6NCL1 334 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 OR4C46A6NHA9 309 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 OR5B21A6NL26 309 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 CEACAM18A8MTB9 384 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 H3BQF6 201 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 H7C417 338 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 MFNGO00587 321 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 DEGS1O15121 323 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 MRPS12O15235 138 aaKnown RBP2.29□□□□□ -2.04
CD46-213ENST00000471987 HMGB3O15347 200 aaKnown RBP2.29□□□□□ -2.04
CD46-213ENST00000471987 MBTPS2O43462 519 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 CXCL13O43927 109 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 MFSD11O43934 449 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 ZNF780AO75290 641 aaPredicted RBP2.29□□□□□ -2.04
CD46-213ENST00000471987 SPAG7O75391 227 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 CLIC3O95833 236 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 APOA2P02652 100 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 DBIP07108 87 aaKnown RBP2.29□□□□□ -2.04
CD46-213ENST00000471987 OR5AL1P0C617 328 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 DUX4L2P0CJ85 424 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 DUX4L3P0CJ86 424 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 DUX4L5P0CJ88 424 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 DUX4L6P0CJ89 424 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 DUX4L7P0CJ90 424 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 OR1E2P47887 323 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 SSR4P51571 173 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 DLX1P56177 255 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 TPI1P60174 286 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 RAB5BP61020 215 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 HSPE1P61604 102 aaKnown RBP2.29□□□□□ -2.04
CD46-213ENST00000471987 SELENOWP63302 87 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 RAB40BQ12829 278 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 LTC4SQ16873 150 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 PARP15Q460N3 678 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 TMEM69Q5SWH9 247 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 AKR1C8PQ5T2L2 129 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 FAM162BQ5T6X4 162 aa2.29□□□□□ -2.04
CD46-213ENST00000471987 FAM27D1Q5T7N8 215 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms