RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, human

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR4-208	ENST00000471880	IGKV1D-33	P01593	117 aa		11.84	□□□□□ -0.51
SSR4-208	ENST00000471880	IGKV1-33	P01594	117 aa		11.84	□□□□□ -0.51
SSR4-208	ENST00000471880	VEGFC	P49767	419 aa		11.84	□□□□□ -0.51
SSR4-208	ENST00000471880	PSMD7	P51665	324 aa		11.84	□□□□□ -0.51
SSR4-208	ENST00000471880	OR10A3	P58181	314 aa		11.84	□□□□□ -0.51
SSR4-208	ENST00000471880	C22orf42	Q6IC83	251 aa		11.84	□□□□□ -0.51
SSR4-208	ENST00000471880	OR2W3	Q7Z3T1	314 aa		11.84	□□□□□ -0.51
SSR4-208	ENST00000471880	SPART	Q8N0X7	666 aa		11.84	□□□□□ -0.51
SSR4-208	ENST00000471880	OR8H3	Q8N146	312 aa		11.84	□□□□□ -0.51
SSR4-208	ENST00000471880	OR52L2P	Q8NGH6	319 aa		11.84	□□□□□ -0.51
SSR4-208	ENST00000471880	FAM3D	Q96BQ1	224 aa		11.84	□□□□□ -0.51
SSR4-208	ENST00000471880	MMP27	Q9H306	513 aa		11.84	□□□□□ -0.51
SSR4-208	ENST00000471880	SERTAD4	Q9NUC0	356 aa		11.84	□□□□□ -0.51
SSR4-208	ENST00000471880	NDUFB11	Q9NX14	153 aa		11.84	□□□□□ -0.51
SSR4-208	ENST00000471880	MOB4	Q9Y3A3	225 aa		11.84	□□□□□ -0.51
SSR4-208	ENST00000471880	TET2	Q6N021	2002 aa	Predicted RBP	11.83	□□□□□ -0.52
SSR4-208	ENST00000471880	NCBP2L	A6PVI3	153 aa	Known RBP	11.83	□□□□□ -0.52
SSR4-208	ENST00000471880	CD28	P10747	220 aa		11.83	□□□□□ -0.52
SSR4-208	ENST00000471880	PPP1CC	P36873	323 aa	Known RBP	11.83	□□□□□ -0.52
SSR4-208	ENST00000471880	RANBP1	P43487	201 aa		11.83	□□□□□ -0.52
SSR4-208	ENST00000471880	LOXL3	P58215	753 aa		11.83	□□□□□ -0.52
SSR4-208	ENST00000471880	MRPS15	P82914	257 aa	Known RBP	11.83	□□□□□ -0.52
SSR4-208	ENST00000471880	GNMT	Q14749	295 aa		11.83	□□□□□ -0.52
SSR4-208	ENST00000471880	KHDC1L	Q5JSQ8	128 aa		11.83	□□□□□ -0.52
SSR4-208	ENST00000471880	CENPV	Q7Z7K6	275 aa	Predicted RBP	11.83	□□□□□ -0.52
SSR4-208	ENST00000471880	TGIF2LX	Q8IUE1	241 aa		11.83	□□□□□ -0.52
SSR4-208	ENST00000471880	GALM	Q96C23	342 aa		11.83	□□□□□ -0.52
SSR4-208	ENST00000471880	OCSTAMP	Q9BR26	566 aa		11.83	□□□□□ -0.52
SSR4-208	ENST00000471880	TM2D1	Q9BX74	207 aa		11.83	□□□□□ -0.52
SSR4-208	ENST00000471880	LPAR5	Q9H1C0	372 aa		11.83	□□□□□ -0.52
SSR4-208	ENST00000471880	STEAP1	Q9UHE8	339 aa		11.83	□□□□□ -0.52
SSR4-208	ENST00000471880	MEGF8	Q7Z7M0	2845 aa		11.83	□□□□□ -0.52
SSR4-208	ENST00000471880		A0A075B6Q4	140 aa		11.82	□□□□□ -0.52
SSR4-208	ENST00000471880		A0A0A6YYD4	124 aa		11.82	□□□□□ -0.52
SSR4-208	ENST00000471880	IGHV1-3	A0A0C4DH29	117 aa		11.82	□□□□□ -0.52
SSR4-208	ENST00000471880		A0A1W2PRX2	142 aa		11.82	□□□□□ -0.52
SSR4-208	ENST00000471880		M0QZK8	103 aa		11.82	□□□□□ -0.52
SSR4-208	ENST00000471880	MRPS14	O60783	128 aa	Known RBP	11.82	□□□□□ -0.52
SSR4-208	ENST00000471880	RAB3B	P20337	219 aa		11.82	□□□□□ -0.52
SSR4-208	ENST00000471880	QRFP	P83859	136 aa		11.82	□□□□□ -0.52
SSR4-208	ENST00000471880	NEDD8	Q15843	81 aa		11.82	□□□□□ -0.52
SSR4-208	ENST00000471880	C2orf76	Q3KRA6	126 aa		11.82	□□□□□ -0.52
SSR4-208	ENST00000471880	TMEM30B	Q3MIR4	351 aa		11.82	□□□□□ -0.52
SSR4-208	ENST00000471880	FCGR1B	Q92637	280 aa		11.82	□□□□□ -0.52
SSR4-208	ENST00000471880	HDHD3	Q9BSH5	251 aa	Predicted RBP	11.82	□□□□□ -0.52
SSR4-208	ENST00000471880	AK3	Q9UIJ7	227 aa		11.82	□□□□□ -0.52
SSR4-208	ENST00000471880	LRRC42	Q9Y546	428 aa		11.82	□□□□□ -0.52
SSR4-208	ENST00000471880	CMYA5	Q8N3K9	4069 aa		11.81	□□□□□ -0.52
SSR4-208	ENST00000471880	TRDV1	A0A1B0GX56	115 aa		11.81	□□□□□ -0.52
SSR4-208	ENST00000471880	RGS11	O94810	467 aa		11.81	□□□□□ -0.52
SSR4-208	ENST00000471880	ZNF816	Q0VGE8	651 aa	Predicted RBP	11.81	□□□□□ -0.52
SSR4-208	ENST00000471880	CT45A1	Q5HYN5	189 aa		11.81	□□□□□ -0.52
SSR4-208	ENST00000471880	UBE2U	Q5VVX9	321 aa		11.81	□□□□□ -0.52
SSR4-208	ENST00000471880	SLC25A48	Q6ZT89	311 aa	Known RBP	11.81	□□□□□ -0.52
SSR4-208	ENST00000471880	THNSL2	Q86YJ6	484 aa		11.81	□□□□□ -0.52
SSR4-208	ENST00000471880	GAPT	Q8N292	157 aa		11.81	□□□□□ -0.52
SSR4-208	ENST00000471880		Q8N2B8	174 aa		11.81	□□□□□ -0.52
SSR4-208	ENST00000471880	LINC00311	Q8N616	119 aa		11.81	□□□□□ -0.52
SSR4-208	ENST00000471880	OR5AU1	Q8NGC0	362 aa		11.81	□□□□□ -0.52
SSR4-208	ENST00000471880	OR56B1	Q8NGI3	324 aa		11.81	□□□□□ -0.52
SSR4-208	ENST00000471880	CT45A3	Q8NHU0	189 aa		11.81	□□□□□ -0.52
SSR4-208	ENST00000471880	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	11.81	□□□□□ -0.52
SSR4-208	ENST00000471880	CFHR4	Q92496	578 aa		11.81	□□□□□ -0.52
SSR4-208	ENST00000471880	ARHGAP5-AS1	Q96IT6	56 aa		11.81	□□□□□ -0.52
SSR4-208	ENST00000471880	ABHD14A	Q9BUJ0	271 aa		11.81	□□□□□ -0.52
SSR4-208	ENST00000471880	YTHDF1	Q9BYJ9	559 aa	Known RBP	11.81	□□□□□ -0.52
SSR4-208	ENST00000471880	MBNL3	Q9NUK0	354 aa	Known RBP	11.81	□□□□□ -0.52
SSR4-208	ENST00000471880	JPT1	Q9UK76	154 aa		11.81	□□□□□ -0.52
SSR4-208	ENST00000471880	SSR3	Q9UNL2	185 aa		11.81	□□□□□ -0.52
SSR4-208	ENST00000471880	TRAV1-2	A0A0B4J238	106 aa		11.8	□□□□□ -0.52
SSR4-208	ENST00000471880	TMEM272	A0A1B0GTI8	110 aa		11.8	□□□□□ -0.52
SSR4-208	ENST00000471880	HSPA12A	O43301	675 aa		11.8	□□□□□ -0.52
SSR4-208	ENST00000471880	MORN2	Q502X0	79 aa		11.8	□□□□□ -0.52
SSR4-208	ENST00000471880	ZNF773	Q6PK81	442 aa		11.8	□□□□□ -0.52
SSR4-208	ENST00000471880	OR2AK2	Q8NG84	335 aa		11.8	□□□□□ -0.52
SSR4-208	ENST00000471880	OR2T10	Q8NGZ9	312 aa		11.8	□□□□□ -0.52
SSR4-208	ENST00000471880	CITED2	Q99967	270 aa	Predicted RBP	11.8	□□□□□ -0.52
SSR4-208	ENST00000471880	CMSS1	Q9BQ75	279 aa	Known RBP	11.8	□□□□□ -0.52
SSR4-208	ENST00000471880	PECR	Q9BY49	303 aa		11.8	□□□□□ -0.52
SSR4-208	ENST00000471880	RAB22A	Q9UL26	194 aa		11.8	□□□□□ -0.52
SSR4-208	ENST00000471880		A0A0B4J203	849 aa		11.79	□□□□□ -0.52
SSR4-208	ENST00000471880	LOC100506127	A0A0U1RQW1	187 aa		11.79	□□□□□ -0.52
SSR4-208	ENST00000471880	IFITM5	A6NNB3	132 aa		11.79	□□□□□ -0.52
SSR4-208	ENST00000471880	TXNL1	O43396	289 aa		11.79	□□□□□ -0.52
SSR4-208	ENST00000471880	CD3G	P09693	182 aa		11.79	□□□□□ -0.52
SSR4-208	ENST00000471880	GADD45A	P24522	165 aa		11.79	□□□□□ -0.52
SSR4-208	ENST00000471880	ZNF134	P52741	427 aa		11.79	□□□□□ -0.52
SSR4-208	ENST00000471880	PLA2G7	Q13093	441 aa		11.79	□□□□□ -0.52
SSR4-208	ENST00000471880	HMGN3	Q15651	99 aa		11.79	□□□□□ -0.52
SSR4-208	ENST00000471880		Q3ZCU0	254 aa		11.79	□□□□□ -0.52
SSR4-208	ENST00000471880	MOB1B	Q7L9L4	216 aa		11.79	□□□□□ -0.52
SSR4-208	ENST00000471880	ZNF554	Q86TJ5	538 aa		11.79	□□□□□ -0.52
SSR4-208	ENST00000471880	C8orf31	Q8N9H6	132 aa		11.79	□□□□□ -0.52
SSR4-208	ENST00000471880	ZNF439	Q8NDP4	499 aa		11.79	□□□□□ -0.52
SSR4-208	ENST00000471880	R3HDM4	Q96D70	268 aa		11.79	□□□□□ -0.52
SSR4-208	ENST00000471880	RBMXL1	Q96E39	390 aa	Known RBP	11.79	□□□□□ -0.52
SSR4-208	ENST00000471880	EAF1	Q96JC9	268 aa	Predicted RBP	11.79	□□□□□ -0.52
SSR4-208	ENST00000471880	RIMS4	Q9H426	269 aa	Predicted RBP	11.79	□□□□□ -0.52
SSR4-208	ENST00000471880	C12orf4	Q9NQ89	552 aa		11.79	□□□□□ -0.52
SSR4-208	ENST00000471880	TXNL4B	Q9NX01	149 aa	Known RBP	11.79	□□□□□ -0.52

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