RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 C1QTNF6Q9BXI9 259 aa0.13□□□□□ -2.39
PRPF40A-207ENST00000471701 BLZF1Q9H2G9 400 aa0.13□□□□□ -2.39
PRPF40A-207ENST00000471701 C11orf1Q9H5F2 150 aa0.13□□□□□ -2.39
PRPF40A-207ENST00000471701 C11orf49Q9H6J7 331 aa0.13□□□□□ -2.39
PRPF40A-207ENST00000471701 RTTNQ86VV8 2226 aa0.13□□□□□ -2.39
PRPF40A-207ENST00000471701 MYH11P35749 1972 aa0.12□□□□□ -2.39
PRPF40A-207ENST00000471701 SCN9AQ15858 1988 aa0.12□□□□□ -2.39
PRPF40A-207ENST00000471701 AQRO60306 1485 aaKnown RBP eCLIP0.12□□□□□ -2.39
PRPF40A-207ENST00000471701 PGLYRP1O75594 196 aaPredicted RBP0.12□□□□□ -2.39
PRPF40A-207ENST00000471701 CCR7P32248 378 aa0.12□□□□□ -2.39
PRPF40A-207ENST00000471701 RELAQ04206 551 aa0.12□□□□□ -2.39
PRPF40A-207ENST00000471701 BAXQ07812 192 aa0.12□□□□□ -2.39
PRPF40A-207ENST00000471701 DGAT2L6Q6ZPD8 337 aa0.12□□□□□ -2.39
PRPF40A-207ENST00000471701 OR2AE1Q8NHA4 323 aa0.12□□□□□ -2.39
PRPF40A-207ENST00000471701 LHFPL5Q8TAF8 219 aa0.12□□□□□ -2.39
PRPF40A-207ENST00000471701 KIAA1143Q96AT1 154 aaPredicted RBP0.12□□□□□ -2.39
PRPF40A-207ENST00000471701 MYOFQ9NZM1 2061 aa0.11□□□□□ -2.39
PRPF40A-207ENST00000471701 A0A1B0GTQ1 180 aa0.11□□□□□ -2.39
PRPF40A-207ENST00000471701 MDFIC2A0A1B0GVS7 189 aa0.11□□□□□ -2.39
PRPF40A-207ENST00000471701 C2orf74A8MZ97 194 aa0.11□□□□□ -2.39
PRPF40A-207ENST00000471701 B4DEV8 164 aa0.11□□□□□ -2.39
PRPF40A-207ENST00000471701 I3L4J1 428 aa0.11□□□□□ -2.39
PRPF40A-207ENST00000471701 UBFD1O14562 309 aaKnown RBP0.11□□□□□ -2.39
PRPF40A-207ENST00000471701 SRMP19623 302 aa0.11□□□□□ -2.39
PRPF40A-207ENST00000471701 PSMA1P25786 263 aaKnown RBP0.11□□□□□ -2.39
PRPF40A-207ENST00000471701 PPP1CCP36873 323 aaKnown RBP0.11□□□□□ -2.39
PRPF40A-207ENST00000471701 IDH3GP51553 393 aaPredicted RBP0.11□□□□□ -2.39
PRPF40A-207ENST00000471701 AKR1C2P52895 323 aa0.11□□□□□ -2.39
PRPF40A-207ENST00000471701 SLC35A2P78381 396 aa0.11□□□□□ -2.39
PRPF40A-207ENST00000471701 TMEM155Q4W5P6 130 aa0.11□□□□□ -2.39
PRPF40A-207ENST00000471701 ASCC1Q8N9N2 400 aaKnown RBP0.11□□□□□ -2.39
PRPF40A-207ENST00000471701 OR8B12Q8NGG6 310 aa0.11□□□□□ -2.39
PRPF40A-207ENST00000471701 PRSS27Q9BQR3 290 aa0.11□□□□□ -2.39
PRPF40A-207ENST00000471701 HAUS4Q9H6D7 363 aa0.11□□□□□ -2.39
PRPF40A-207ENST00000471701 CHRAC1Q9NRG0 131 aa0.11□□□□□ -2.39
PRPF40A-207ENST00000471701 SCML1Q9UN30 329 aa0.11□□□□□ -2.39
PRPF40A-207ENST00000471701 RABL2BQ9UNT1 228 aa0.11□□□□□ -2.39
PRPF40A-207ENST00000471701 NCF1BA6NI72 391 aaPredicted RBP0.1□□□□□ -2.39
PRPF40A-207ENST00000471701 NCF1CA8MVU1 366 aaPredicted RBP0.1□□□□□ -2.39
PRPF40A-207ENST00000471701 PRMT5O14744 637 aaPredicted RBP0.1□□□□□ -2.39
PRPF40A-207ENST00000471701 ZNF737O75373 536 aa0.1□□□□□ -2.39
PRPF40A-207ENST00000471701 ATF1P18846 271 aa0.1□□□□□ -2.39
PRPF40A-207ENST00000471701 ACTL10Q5JWF8 245 aa0.1□□□□□ -2.39
PRPF40A-207ENST00000471701 C15orf53Q8NAA6 179 aa0.1□□□□□ -2.39
PRPF40A-207ENST00000471701 OR8G5Q8NG78 346 aa0.1□□□□□ -2.39
PRPF40A-207ENST00000471701 CDKL2Q92772 493 aa0.1□□□□□ -2.39
PRPF40A-207ENST00000471701 TOP1MTQ969P6 601 aa0.1□□□□□ -2.39
PRPF40A-207ENST00000471701 GALMQ96C23 342 aa0.1□□□□□ -2.39
PRPF40A-207ENST00000471701 ZMYND19Q96E35 227 aaPredicted RBP0.1□□□□□ -2.39
PRPF40A-207ENST00000471701 EBNA1BP2Q99848 306 aaKnown RBP0.1□□□□□ -2.39
PRPF40A-207ENST00000471701 CDCA4Q9BXL8 241 aa0.1□□□□□ -2.39
PRPF40A-207ENST00000471701 ANKHQ9HCJ1 492 aa0.1□□□□□ -2.39
PRPF40A-207ENST00000471701 IFNKQ9P0W0 207 aa0.1□□□□□ -2.39
PRPF40A-207ENST00000471701 PCDH15Q96QU1 1955 aa0.1□□□□□ -2.39
PRPF40A-207ENST00000471701 POLEQ07864 2286 aa0.1□□□□□ -2.39
PRPF40A-207ENST00000471701 INTS1Q8N201 2190 aaKnown RBP0.09□□□□□ -2.39
PRPF40A-207ENST00000471701 TRAV8-2A0A0B4J237 113 aa0.09□□□□□ -2.4
PRPF40A-207ENST00000471701 TRAV41A0A0B4J266 112 aa0.09□□□□□ -2.4
PRPF40A-207ENST00000471701 PLA2G10O15496 165 aa0.09□□□□□ -2.4
PRPF40A-207ENST00000471701 ZNF728P0DKX0 622 aa0.09□□□□□ -2.4
PRPF40A-207ENST00000471701 CRHBPP24387 322 aa0.09□□□□□ -2.4
PRPF40A-207ENST00000471701 PEX19P40855 299 aa0.09□□□□□ -2.4
PRPF40A-207ENST00000471701 TSPEAR-AS2P59090 65 aa0.09□□□□□ -2.4
PRPF40A-207ENST00000471701 GABARAPL2P60520 117 aa0.09□□□□□ -2.4
PRPF40A-207ENST00000471701 DYNLL1P63167 89 aaKnown RBP0.09□□□□□ -2.4
PRPF40A-207ENST00000471701 CDK5R1Q15078 307 aa0.09□□□□□ -2.4
PRPF40A-207ENST00000471701 PDK2Q15119 407 aa0.09□□□□□ -2.4
PRPF40A-207ENST00000471701 SURF2Q15527 256 aaPredicted RBP0.09□□□□□ -2.4
PRPF40A-207ENST00000471701 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.09□□□□□ -2.4
PRPF40A-207ENST00000471701 LAMTOR1Q6IAA8 161 aa0.09□□□□□ -2.4
PRPF40A-207ENST00000471701 FAM183BPQ6ZVS7 135 aa0.09□□□□□ -2.4
PRPF40A-207ENST00000471701 SPICQ8N5J4 248 aa0.09□□□□□ -2.4
PRPF40A-207ENST00000471701 YIPF7Q8N8F6 280 aa0.09□□□□□ -2.4
PRPF40A-207ENST00000471701 BBOF1Q8ND07 529 aa0.09□□□□□ -2.4
PRPF40A-207ENST00000471701 CYGBQ8WWM9 190 aa0.09□□□□□ -2.4
PRPF40A-207ENST00000471701 MND1Q9BWT6 205 aa0.09□□□□□ -2.4
PRPF40A-207ENST00000471701 MAP1LC3CQ9BXW4 147 aa0.09□□□□□ -2.4
PRPF40A-207ENST00000471701 FBXO44Q9H4M3 255 aa0.09□□□□□ -2.4
PRPF40A-207ENST00000471701 RGCCQ9H4X1 137 aa0.09□□□□□ -2.4
PRPF40A-207ENST00000471701 VAPAQ9P0L0 249 aa0.09□□□□□ -2.4
PRPF40A-207ENST00000471701 TECTAO75443 2155 aa0.08□□□□□ -2.4
PRPF40A-207ENST00000471701 DIDO1Q9BTC0 2240 aaKnown RBP0.08□□□□□ -2.4
PRPF40A-207ENST00000471701 TMEM235A6NFC5 223 aa0.08□□□□□ -2.4
PRPF40A-207ENST00000471701 MRPS14O60783 128 aaKnown RBP0.08□□□□□ -2.4
PRPF40A-207ENST00000471701 EPPINO95925 133 aa0.08□□□□□ -2.4
PRPF40A-207ENST00000471701 STAG3L3P0CL85 134 aa0.08□□□□□ -2.4
PRPF40A-207ENST00000471701 GBE1Q04446 702 aa0.08□□□□□ -2.4
PRPF40A-207ENST00000471701 FAM162BQ5T6X4 162 aa0.08□□□□□ -2.4
PRPF40A-207ENST00000471701 FP248Q71RG6 208 aaPredicted RBP0.08□□□□□ -2.4
PRPF40A-207ENST00000471701 TMCO2Q7Z6W1 182 aaPredicted RBP0.08□□□□□ -2.4
PRPF40A-207ENST00000471701 OR4K17Q8NGC6 315 aa0.08□□□□□ -2.4
PRPF40A-207ENST00000471701 OR5D18Q8NGL1 313 aa0.08□□□□□ -2.4
PRPF40A-207ENST00000471701 OR4P4Q8NGL7 312 aa0.08□□□□□ -2.4
PRPF40A-207ENST00000471701 OR6N2Q8NGY6 317 aa0.08□□□□□ -2.4
PRPF40A-207ENST00000471701 ANGPTL6Q8NI99 470 aa0.08□□□□□ -2.4
PRPF40A-207ENST00000471701 FAAP24Q9BTP7 215 aa0.08□□□□□ -2.4
PRPF40A-207ENST00000471701 TAS2R13Q9NYV9 303 aa0.08□□□□□ -2.4
PRPF40A-207ENST00000471701 CACNA1BQ00975 2339 aa0.07□□□□□ -2.4
PRPF40A-207ENST00000471701 PSMD11O00231 422 aa0.07□□□□□ -2.4
PRPF40A-207ENST00000471701 SLC17A3O00476 420 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms