RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 PSPNO60542 156 aa15.68■□□□□ 0.1
COL20A1-205ENST00000471582 CD200P41217 278 aa15.68■□□□□ 0.1
COL20A1-205ENST00000471582 GTF3C1Q12789 2109 aa15.68■□□□□ 0.1
COL20A1-205ENST00000471582 WDR82Q6UXN9 313 aa15.68■□□□□ 0.1
COL20A1-205ENST00000471582 ACP7Q6ZNF0 438 aa15.68■□□□□ 0.1
COL20A1-205ENST00000471582 COMMD1Q8N668 190 aa15.68■□□□□ 0.1
COL20A1-205ENST00000471582 OR51H1Q8NH63 302 aa15.68■□□□□ 0.1
COL20A1-205ENST00000471582 LSM10Q969L4 123 aaKnown RBP15.68■□□□□ 0.1
COL20A1-205ENST00000471582 OR14J1Q9UGF5 321 aa15.68■□□□□ 0.1
COL20A1-205ENST00000471582 STRAPQ9Y3F4 350 aaKnown RBP15.68■□□□□ 0.1
COL20A1-205ENST00000471582 TRAV39A0A0B4J263 110 aa15.67■□□□□ 0.1
COL20A1-205ENST00000471582 FAM24AA6NFZ4 105 aa15.67■□□□□ 0.1
COL20A1-205ENST00000471582 F8W036 122 aa15.67■□□□□ 0.1
COL20A1-205ENST00000471582 K7EM74 188 aa15.67■□□□□ 0.1
COL20A1-205ENST00000471582 IFNL4K9M1U5 179 aa15.67■□□□□ 0.1
COL20A1-205ENST00000471582 DNASE2O00115 360 aaPredicted RBP15.67■□□□□ 0.1
COL20A1-205ENST00000471582 TSPAN4O14817 238 aa15.67■□□□□ 0.1
COL20A1-205ENST00000471582 PSG2P11465 335 aa15.67■□□□□ 0.1
COL20A1-205ENST00000471582 PLA2G5P39877 138 aa15.67■□□□□ 0.1
COL20A1-205ENST00000471582 KRTCAP3Q53RY4 240 aa15.67■□□□□ 0.1
COL20A1-205ENST00000471582 FAM180AQ6UWF9 173 aa15.67■□□□□ 0.1
COL20A1-205ENST00000471582 PRR18Q8N4B5 295 aa15.67■□□□□ 0.1
COL20A1-205ENST00000471582 TMEM252Q8N6L7 170 aa15.67■□□□□ 0.1
COL20A1-205ENST00000471582 INTS1Q8N201 2190 aaKnown RBP15.67■□□□□ 0.1
COL20A1-205ENST00000471582 IGHV3-64DA0A0J9YX35 117 aa15.66■□□□□ 0.1
COL20A1-205ENST00000471582 CD5P06127 495 aa15.66■□□□□ 0.1
COL20A1-205ENST00000471582 MUC1P15941 1255 aaPredicted RBP15.66■□□□□ 0.1
COL20A1-205ENST00000471582 FABP6P51161 128 aa15.66■□□□□ 0.1
COL20A1-205ENST00000471582 SMIM21Q3B7S5 101 aa15.66■□□□□ 0.1
COL20A1-205ENST00000471582 C3orf36Q3SXR2 165 aa15.66■□□□□ 0.1
COL20A1-205ENST00000471582 RNF115Q9Y4L5 304 aa15.66■□□□□ 0.1
COL20A1-205ENST00000471582 A6NLC8 198 aa15.66■□□□□ 0.1
COL20A1-205ENST00000471582 RNF212BA8MTL3 300 aa15.66■□□□□ 0.1
COL20A1-205ENST00000471582 CEACAM6P40199 344 aa15.66■□□□□ 0.1
COL20A1-205ENST00000471582 ZNF826PQ6ZT77 177 aa15.66■□□□□ 0.1
COL20A1-205ENST00000471582 ABHD17AQ96GS6 310 aa15.66■□□□□ 0.1
COL20A1-205ENST00000471582 TOLLIPQ9H0E2 274 aa15.66■□□□□ 0.1
COL20A1-205ENST00000471582 MAGT1Q9H0U3 335 aa15.66■□□□□ 0.1
COL20A1-205ENST00000471582 FAM215AQ9Y5M1 114 aa15.66■□□□□ 0.1
COL20A1-205ENST00000471582 ANKRD11Q6UB99 2663 aaPredicted RBP15.65■□□□□ 0.1
COL20A1-205ENST00000471582 OOEPA6NGQ2 149 aa15.65■□□□□ 0.1
COL20A1-205ENST00000471582 RNASEK-C17orf49H0YIS7 233 aa15.65■□□□□ 0.1
COL20A1-205ENST00000471582 TRIM77I1YAP6 450 aa15.65■□□□□ 0.1
COL20A1-205ENST00000471582 WRBO00258 174 aa15.65■□□□□ 0.1
COL20A1-205ENST00000471582 WNT9BO14905 357 aa15.65■□□□□ 0.1
COL20A1-205ENST00000471582 ID4P47928 161 aa15.65■□□□□ 0.1
COL20A1-205ENST00000471582 CEBPDP49716 269 aaPredicted RBP15.65■□□□□ 0.1
COL20A1-205ENST00000471582 ARHGDIBP52566 201 aa15.65■□□□□ 0.1
COL20A1-205ENST00000471582 PAX5Q02548 391 aa15.65■□□□□ 0.1
COL20A1-205ENST00000471582 TIMM23BQ5SRD1 257 aa15.65■□□□□ 0.1
COL20A1-205ENST00000471582 PRAMEF6Q5VXH4 476 aa15.65■□□□□ 0.1
COL20A1-205ENST00000471582 PUSL1Q8N0Z8 303 aaKnown RBP15.65■□□□□ 0.1
COL20A1-205ENST00000471582 ZBTB34Q8NCN2 500 aa15.65■□□□□ 0.1
COL20A1-205ENST00000471582 GALMQ96C23 342 aa15.65■□□□□ 0.1
COL20A1-205ENST00000471582 GPR146Q96CH1 333 aa15.65■□□□□ 0.1
COL20A1-205ENST00000471582 CACFD1Q9UGQ2 172 aa15.65■□□□□ 0.1
COL20A1-205ENST00000471582 RBM7Q9Y580 266 aaKnown RBP15.65■□□□□ 0.1
COL20A1-205ENST00000471582 TMEM50AO95807 157 aa15.64■□□□□ 0.09
COL20A1-205ENST00000471582 TIMP3P35625 211 aa15.64■□□□□ 0.09
COL20A1-205ENST00000471582 DVL1P1P54792 670 aaPredicted RBP15.64■□□□□ 0.09
COL20A1-205ENST00000471582 UCNP55089 124 aa15.64■□□□□ 0.09
COL20A1-205ENST00000471582 C1orf185Q5T7R7 199 aa15.64■□□□□ 0.09
COL20A1-205ENST00000471582 TMEM231Q9H6L2 316 aa15.64■□□□□ 0.09
COL20A1-205ENST00000471582 MSL2Q9HCI7 577 aa15.64■□□□□ 0.09
COL20A1-205ENST00000471582 KCNS2Q9ULS6 477 aa15.64■□□□□ 0.09
COL20A1-205ENST00000471582 MGAQ8IWI9 3026 aa15.64■□□□□ 0.09
COL20A1-205ENST00000471582 SVILO95425 2214 aa15.64■□□□□ 0.09
COL20A1-205ENST00000471582 A0A0G2JRQ6 117 aa15.64■□□□□ 0.09
COL20A1-205ENST00000471582 C12orf77C9JDV5 145 aa15.64■□□□□ 0.09
COL20A1-205ENST00000471582 CHST1O43916 411 aa15.64■□□□□ 0.09
COL20A1-205ENST00000471582 PTBP3O95758 552 aaKnown RBP15.64■□□□□ 0.09
COL20A1-205ENST00000471582 TSPAN15O95858 294 aa15.64■□□□□ 0.09
COL20A1-205ENST00000471582 IGKV1-39P01597 117 aa15.64■□□□□ 0.09
COL20A1-205ENST00000471582 IGKV1D-39P04432 117 aa15.64■□□□□ 0.09
COL20A1-205ENST00000471582 OR8U9P0C7N5 309 aa15.64■□□□□ 0.09
COL20A1-205ENST00000471582 TMPRSS3P57727 454 aa15.64■□□□□ 0.09
COL20A1-205ENST00000471582 MSMO1Q15800 293 aa15.64■□□□□ 0.09
COL20A1-205ENST00000471582 TBR1Q16650 682 aa15.64■□□□□ 0.09
COL20A1-205ENST00000471582 GUCA2BQ16661 112 aa15.64■□□□□ 0.09
COL20A1-205ENST00000471582 DRAM1Q8N682 238 aa15.64■□□□□ 0.09
COL20A1-205ENST00000471582 HSD17B11Q8NBQ5 300 aa15.64■□□□□ 0.09
COL20A1-205ENST00000471582 OR8U1Q8NH10 309 aa15.64■□□□□ 0.09
COL20A1-205ENST00000471582 RAB40CQ96S21 281 aa15.64■□□□□ 0.09
COL20A1-205ENST00000471582 FZR1Q9UM11 496 aa15.64■□□□□ 0.09
COL20A1-205ENST00000471582 PPP1R3CQ9UQK1 317 aa15.64■□□□□ 0.09
COL20A1-205ENST00000471582 FAM96BQ9Y3D0 163 aa15.64■□□□□ 0.09
COL20A1-205ENST00000471582 CACNA1AO00555 2505 aa15.63■□□□□ 0.09
COL20A1-205ENST00000471582 NCOR2Q9Y618 2525 aa15.63■□□□□ 0.09
COL20A1-205ENST00000471582 KIAA1324LA8MWY0 1029 aaPredicted RBP15.63■□□□□ 0.09
COL20A1-205ENST00000471582 SNAPINO95295 136 aa15.63■□□□□ 0.09
COL20A1-205ENST00000471582 OR3A1P47881 315 aa15.63■□□□□ 0.09
COL20A1-205ENST00000471582 CAMLGP49069 296 aa15.63■□□□□ 0.09
COL20A1-205ENST00000471582 ZNF645Q8N7E2 425 aa15.63■□□□□ 0.09
COL20A1-205ENST00000471582 TMEM171Q8WVE6 324 aa15.63■□□□□ 0.09
COL20A1-205ENST00000471582 SH3BGRL3Q9H299 93 aa15.63■□□□□ 0.09
COL20A1-205ENST00000471582 TP53TG5Q9Y2B4 290 aa15.63■□□□□ 0.09
COL20A1-205ENST00000471582 UMAD1C9J7I0 102 aa15.62■□□□□ 0.09
COL20A1-205ENST00000471582 CLINT1Q14677 625 aa15.62■□□□□ 0.09
COL20A1-205ENST00000471582 ZNF585BQ52M93 769 aa15.62■□□□□ 0.09
COL20A1-205ENST00000471582 ZNF474Q6S9Z5 364 aaPredicted RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms