RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 AKR1E2Q96JD6 320 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 HYLS1Q96M11 299 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 SUCNR1Q9BXA5 334 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 CHIAQ9BZP6 476 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 RAB18Q9NP72 206 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 KAAG1Q9UBP8 84 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 DUX4Q9UBX2 424 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 JPT1Q9UK76 154 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 KCNIP3Q9Y2W7 256 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 HIVEP3Q5T1R4 2406 aa7.8□□□□□ -1.16
VPS52-216ENST00000471309 ANKHD1Q8IWZ3 2542 aaKnown RBP7.8□□□□□ -1.16
VPS52-216ENST00000471309 CACNA1DQ01668 2161 aa7.79□□□□□ -1.16
VPS52-216ENST00000471309 TRGV10A0A0A0MS01 117 aa7.79□□□□□ -1.16
VPS52-216ENST00000471309 F2RL2O00254 374 aa7.79□□□□□ -1.16
VPS52-216ENST00000471309 TMPRSS2O15393 492 aa7.79□□□□□ -1.16
VPS52-216ENST00000471309 SIX6O95475 246 aa7.79□□□□□ -1.16
VPS52-216ENST00000471309 WNT2P09544 360 aa7.79□□□□□ -1.16
VPS52-216ENST00000471309 OR5AC1P0C628 307 aa7.79□□□□□ -1.16
VPS52-216ENST00000471309 CGB3P0DN86 165 aa7.79□□□□□ -1.16
VPS52-216ENST00000471309 CGB7P0DN87 165 aa7.79□□□□□ -1.16
VPS52-216ENST00000471309 DNASE1P24855 282 aa7.79□□□□□ -1.16
VPS52-216ENST00000471309 S100GP29377 79 aa7.79□□□□□ -1.16
VPS52-216ENST00000471309 CEACAM6P40199 344 aa7.79□□□□□ -1.16
VPS52-216ENST00000471309 SRPXP78539 464 aa7.79□□□□□ -1.16
VPS52-216ENST00000471309 UBALD1Q8TB05 177 aa7.79□□□□□ -1.16
VPS52-216ENST00000471309 NINJ1Q92982 152 aa7.79□□□□□ -1.16
VPS52-216ENST00000471309 ARL11Q969Q4 196 aa7.79□□□□□ -1.16
VPS52-216ENST00000471309 ZDHHC16Q969W1 377 aa7.79□□□□□ -1.16
VPS52-216ENST00000471309 DCTN5Q9BTE1 182 aa7.79□□□□□ -1.16
VPS52-216ENST00000471309 CCL28Q9NRJ3 127 aa7.79□□□□□ -1.16
VPS52-216ENST00000471309 CALYQ9NYX4 217 aa7.79□□□□□ -1.16
VPS52-216ENST00000471309 SLC25A10Q9UBX3 287 aaPredicted RBP7.79□□□□□ -1.16
VPS52-216ENST00000471309 LPAR3Q9UBY5 353 aa7.79□□□□□ -1.16
VPS52-216ENST00000471309 NAV2Q8IVL1 2488 aa7.79□□□□□ -1.16
VPS52-216ENST00000471309 C3orf85A0A1B0GTC6 90 aa7.78□□□□□ -1.16
VPS52-216ENST00000471309 hADV38S2A0JD32 116 aa7.78□□□□□ -1.16
VPS52-216ENST00000471309 ZNF729A6NN14 1252 aaPredicted RBP7.78□□□□□ -1.16
VPS52-216ENST00000471309 H0Y980 276 aa7.78□□□□□ -1.16
VPS52-216ENST00000471309 CCSO14618 274 aa7.78□□□□□ -1.16
VPS52-216ENST00000471309 HSD17B6O14756 317 aa7.78□□□□□ -1.16
VPS52-216ENST00000471309 MPPED1O15442 326 aa7.78□□□□□ -1.16
VPS52-216ENST00000471309 NDUFB3O43676 98 aa7.78□□□□□ -1.16
VPS52-216ENST00000471309 B3GALNT1O75752 331 aa7.78□□□□□ -1.16
VPS52-216ENST00000471309 IGLV2-14P01704 120 aa7.78□□□□□ -1.16
VPS52-216ENST00000471309 IGHV2-70P01814 119 aa7.78□□□□□ -1.16
VPS52-216ENST00000471309 MEF2CQ06413 473 aaPredicted RBP7.78□□□□□ -1.16
VPS52-216ENST00000471309 TMEM187Q14656 261 aa7.78□□□□□ -1.16
VPS52-216ENST00000471309 GNMTQ14749 295 aa7.78□□□□□ -1.16
VPS52-216ENST00000471309 GSG1LQ6UXU4 331 aa7.78□□□□□ -1.16
VPS52-216ENST00000471309 LIAT1Q6ZQX7 453 aa7.78□□□□□ -1.16
VPS52-216ENST00000471309 TCF23Q7RTU1 214 aa7.78□□□□□ -1.16
VPS52-216ENST00000471309 TBC1D26Q86UD7 250 aa7.78□□□□□ -1.16
VPS52-216ENST00000471309 ZBTB34Q8NCN2 500 aa7.78□□□□□ -1.16
VPS52-216ENST00000471309 OR52L2PQ8NGH6 319 aa7.78□□□□□ -1.16
VPS52-216ENST00000471309 CORO2AQ92828 525 aa7.78□□□□□ -1.16
VPS52-216ENST00000471309 SPOCK3Q9BQ16 436 aa7.78□□□□□ -1.16
VPS52-216ENST00000471309 TMEM246Q9BRR3 403 aa7.78□□□□□ -1.16
VPS52-216ENST00000471309 PDCD10Q9BUL8 212 aa7.78□□□□□ -1.16
VPS52-216ENST00000471309 PARP12Q9H0J9 701 aaKnown RBP7.78□□□□□ -1.16
VPS52-216ENST00000471309 LINC00574Q9H8X3 128 aa7.78□□□□□ -1.16
VPS52-216ENST00000471309 PRR13Q9NZ81 148 aa7.78□□□□□ -1.16
VPS52-216ENST00000471309 CTSZQ9UBR2 303 aa7.78□□□□□ -1.16
VPS52-216ENST00000471309 UBE2J1Q9Y385 318 aaPredicted RBP7.78□□□□□ -1.16
VPS52-216ENST00000471309 LINC00312Q9Y6C7 94 aa7.78□□□□□ -1.16
VPS52-216ENST00000471309 ARFGEF3Q5TH69 2177 aa7.78□□□□□ -1.16
VPS52-216ENST00000471309 PIGBOS1A0A0B4J2F0 54 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 KBTBD11-OT1A0A1B0GTJ5 212 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 PHF1O43189 567 aaPredicted RBP7.77□□□□□ -1.17
VPS52-216ENST00000471309 ADAM20O43506 726 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 YPEL1O60688 119 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 ADAP1O75689 374 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 OR8U9P0C7N5 309 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 RNF224P0DH78 156 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 NDUFB7P17568 137 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 COL8A2P25067 703 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 PPP1CCP36873 323 aaKnown RBP7.77□□□□□ -1.17
VPS52-216ENST00000471309 CYCSP99999 105 aaKnown RBP7.77□□□□□ -1.17
VPS52-216ENST00000471309 TLE4Q04727 773 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 FGL1Q08830 312 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 C17orf58Q2M2W7 97 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 LRRC10Q5BKY1 277 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 LGI3Q8N145 548 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 C9orf62Q8N4C0 152 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 ZNF645Q8N7E2 425 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 OR11H4Q8NGC9 324 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 OR10A7Q8NGE5 316 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 OR8U1Q8NH10 309 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 GLYATL2Q8WU03 294 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 EDARADDQ8WWZ3 215 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 MSI2Q96DH6 328 aaKnown RBP7.77□□□□□ -1.17
VPS52-216ENST00000471309 WDR89Q96FK6 387 aaPredicted RBP7.77□□□□□ -1.17
VPS52-216ENST00000471309 C18orf12Q96KH6 178 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 TMEM56Q96MV1 263 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 YPEL2Q96QA6 119 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 TP53RKQ96S44 253 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 NMES1Q9C002 83 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 TMEM222Q9H0R3 208 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 UBTD1Q9HAC8 227 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 OR2S2Q9NQN1 319 aa7.77□□□□□ -1.17
VPS52-216ENST00000471309 TAS2R3Q9NYW6 316 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms