RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 KPRPQ5T749 579 aaPredicted RBP3.92□□□□□ -1.78
CKS1B-204ENST00000471245 SAXO2Q658L1 398 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 C8orf74Q6P047 294 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 C6orf120Q7Z4R8 191 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 C10orf107Q8IVU9 208 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 FAM58AQ8N1B3 248 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 OR9G1Q8NH87 305 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 LINC01006Q8NI28 216 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 SFXN5Q8TD22 340 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 IFT81Q8WYA0 676 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 OR5P2Q8WZ92 322 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 MARC2Q969Z3 335 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 ZHX1-C8orf76Q96EF9 292 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 TMEM101Q96IK0 257 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 ATP5SQ99766 215 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 TMEM246Q9BRR3 403 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 C1orf50Q9BV19 199 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 BEX1Q9HBH7 125 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 NOX3Q9HBY0 568 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 EXD2Q9NVH0 621 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 MYEF2Q9P2K5 600 aaKnown RBP3.92□□□□□ -1.78
CKS1B-204ENST00000471245 TRAPPC4Q9Y296 219 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 HDGFL3Q9Y3E1 203 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 GMEB1Q9Y692 573 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 DYNC2H1Q8NCM8 4307 aaKnown RBP3.92□□□□□ -1.78
CKS1B-204ENST00000471245 SERPINE3A8MV23 424 aa3.91□□□□□ -1.78
CKS1B-204ENST00000471245 GOSR2O14653 212 aa3.91□□□□□ -1.78
CKS1B-204ENST00000471245 MGRN1O60291 552 aa3.91□□□□□ -1.78
CKS1B-204ENST00000471245 MBP02144 154 aa3.91□□□□□ -1.78
CKS1B-204ENST00000471245 SHBGP04278 402 aa3.91□□□□□ -1.78
CKS1B-204ENST00000471245 UBCP0CG48 685 aaKnown RBP3.91□□□□□ -1.78
CKS1B-204ENST00000471245 OR12D1P0DN82 309 aa3.91□□□□□ -1.78
CKS1B-204ENST00000471245 IDH2P48735 452 aaKnown RBP3.91□□□□□ -1.78
CKS1B-204ENST00000471245 EVX1P49640 407 aa3.91□□□□□ -1.78
CKS1B-204ENST00000471245 UBE2NP61088 152 aaKnown RBP3.91□□□□□ -1.78
CKS1B-204ENST00000471245 LCN2P80188 198 aa3.91□□□□□ -1.78
CKS1B-204ENST00000471245 BNIP2Q12982 314 aa3.91□□□□□ -1.78
CKS1B-204ENST00000471245 SLAQ13239 276 aa3.91□□□□□ -1.78
CKS1B-204ENST00000471245 MAD2L1BPQ15013 274 aaPredicted RBP3.91□□□□□ -1.78
CKS1B-204ENST00000471245 TAF9Q16594 264 aa3.91□□□□□ -1.78
CKS1B-204ENST00000471245 GPR157Q5UAW9 335 aa3.91□□□□□ -1.78
CKS1B-204ENST00000471245 TNFAIP8L2Q6P589 184 aaPredicted RBP3.91□□□□□ -1.78
CKS1B-204ENST00000471245 GRINAQ7Z429 371 aa3.91□□□□□ -1.78
CKS1B-204ENST00000471245 LRP11Q86VZ4 500 aa3.91□□□□□ -1.78
CKS1B-204ENST00000471245 DEFB108BQ8NET1 73 aa3.91□□□□□ -1.78
CKS1B-204ENST00000471245 TWIST2Q8WVJ9 160 aa3.91□□□□□ -1.78
CKS1B-204ENST00000471245 RAB8BQ92930 207 aa3.91□□□□□ -1.78
CKS1B-204ENST00000471245 POP5Q969H6 163 aaKnown RBP3.91□□□□□ -1.78
CKS1B-204ENST00000471245 AURKBQ96GD4 344 aaPredicted RBP3.91□□□□□ -1.78
CKS1B-204ENST00000471245 ZNF75AQ96N20 296 aa3.91□□□□□ -1.78
CKS1B-204ENST00000471245 TMEM59Q9BXS4 323 aa3.91□□□□□ -1.78
CKS1B-204ENST00000471245 YTHDF1Q9BYJ9 559 aaKnown RBP3.91□□□□□ -1.78
CKS1B-204ENST00000471245 SLC38A1Q9H2H9 487 aa3.91□□□□□ -1.78
CKS1B-204ENST00000471245 OR51I1Q9H343 314 aa3.91□□□□□ -1.78
CKS1B-204ENST00000471245 SOX21Q9Y651 276 aaPredicted RBP3.91□□□□□ -1.78
CKS1B-204ENST00000471245 BIRC6Q9NR09 4857 aa3.91□□□□□ -1.78
CKS1B-204ENST00000471245 MDFIC2A0A1B0GVS7 189 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 CLPSL1A2RUU4 121 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 RBMY1BA6NDE4 496 aaKnown RBP3.9□□□□□ -1.79
CKS1B-204ENST00000471245 RBMY1EA6NEQ0 496 aaKnown RBP3.9□□□□□ -1.79
CKS1B-204ENST00000471245 C12orf71A8MTZ7 269 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 C12orf77C9JDV5 145 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 FTCDNL1E5RQL4 147 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 KRTAP4-16G5E9R7 235 aaPredicted RBP3.9□□□□□ -1.79
CKS1B-204ENST00000471245 HMGN4O00479 90 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 DYNC1I1O14576 645 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 AIREO43918 545 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 NPIPB7O75200 414 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 APOA1P02647 267 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 GUSBP08236 651 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 RBMY1DP0C7P1 496 aaKnown RBP3.9□□□□□ -1.79
CKS1B-204ENST00000471245 GKN3PP0CG01 181 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 RBMY1A1P0DJD3 496 aaKnown RBP3.9□□□□□ -1.79
CKS1B-204ENST00000471245 NEFHP12036 1026 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 RPS4Y1P22090 263 aaKnown RBP3.9□□□□□ -1.79
CKS1B-204ENST00000471245 ALDH3A1P30838 453 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 NPBWR2P48146 333 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 SLC35A1P78382 337 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 OR7A5Q15622 319 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 ZNF829Q3KNS6 432 aaPredicted RBP3.9□□□□□ -1.79
CKS1B-204ENST00000471245 OTPQ5XKR4 325 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 ZCCHC23Q6ZST2 131 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 AAED1Q7RTV5 226 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 MRPL21Q7Z2W9 205 aaKnown RBP3.9□□□□□ -1.79
CKS1B-204ENST00000471245 ABHD12BQ7Z5M8 362 aaPredicted RBP3.9□□□□□ -1.79
CKS1B-204ENST00000471245 MDP1Q86V88 176 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 C4orf33Q8N1A6 199 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 TRIML2Q8N7C3 387 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 LRRC75AQ8NAA5 344 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 OR13C9Q8NGT0 318 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 ZNF563Q8TA94 476 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 CD300LFQ8TDQ1 290 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 TMEM234Q8WY98 164 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 ROPN1LQ96C74 230 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 CCDC126Q96EE4 140 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 SLC35G5Q96KT7 338 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 ZNF317Q96PQ6 595 aaPredicted RBP3.9□□□□□ -1.79
CKS1B-204ENST00000471245 GAL3ST2Q9H3Q3 398 aa3.9□□□□□ -1.79
CKS1B-204ENST00000471245 FGF20Q9NP95 211 aaPredicted RBP3.9□□□□□ -1.79
CKS1B-204ENST00000471245 MMP26Q9NRE1 261 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms