RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 HIST1H2BKO60814 126 aa17.09■□□□□ 0.33
CDHR3-207ENST00000470188 HIST1H2BJP06899 126 aa17.09■□□□□ 0.33
CDHR3-207ENST00000470188 CXCL1P09341 107 aa17.09■□□□□ 0.33
CDHR3-207ENST00000470188 HIST1H2BOP23527 126 aa17.09■□□□□ 0.33
CDHR3-207ENST00000470188 HIST1H2BBP33778 126 aa17.09■□□□□ 0.33
CDHR3-207ENST00000470188 TNFSF10P50591 281 aa17.09■□□□□ 0.33
CDHR3-207ENST00000470188 SOX8P57073 446 aa17.09■□□□□ 0.33
CDHR3-207ENST00000470188 HIST1H2BDP58876 126 aa17.09■□□□□ 0.33
CDHR3-207ENST00000470188 HIST1H2BCP62807 126 aa17.09■□□□□ 0.33
CDHR3-207ENST00000470188 HIST2H2BEQ16778 126 aa17.09■□□□□ 0.33
CDHR3-207ENST00000470188 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.09■□□□□ 0.33
CDHR3-207ENST00000470188 SLC35E3Q7Z769 313 aa17.09■□□□□ 0.33
CDHR3-207ENST00000470188 ZNF429Q86V71 674 aa17.09■□□□□ 0.33
CDHR3-207ENST00000470188 HIST1H2BHQ93079 126 aa17.09■□□□□ 0.33
CDHR3-207ENST00000470188 HIST1H2BNQ99877 126 aa17.09■□□□□ 0.33
CDHR3-207ENST00000470188 HIST1H2BMQ99879 126 aa17.09■□□□□ 0.33
CDHR3-207ENST00000470188 TGOLN2O43493 480 aa17.09■□□□□ 0.33
CDHR3-207ENST00000470188 RHBDL1O75783 438 aa17.09■□□□□ 0.33
CDHR3-207ENST00000470188 GLIPR1P48060 266 aa17.09■□□□□ 0.33
CDHR3-207ENST00000470188 NKX6-1P78426 367 aaPredicted RBP17.09■□□□□ 0.33
CDHR3-207ENST00000470188 ZNF506Q5JVG8 444 aa17.09■□□□□ 0.33
CDHR3-207ENST00000470188 SP5Q6BEB4 398 aaPredicted RBP17.09■□□□□ 0.33
CDHR3-207ENST00000470188 C20orf204Q6ZNR8 217 aa17.09■□□□□ 0.33
CDHR3-207ENST00000470188 NIPSNAP3BQ9BS92 247 aa17.09■□□□□ 0.33
CDHR3-207ENST00000470188 HIPK2Q9H2X6 1198 aa17.09■□□□□ 0.33
CDHR3-207ENST00000470188 TRBV6-6A0A0A6YYG2 114 aa17.08■□□□□ 0.33
CDHR3-207ENST00000470188 B4DEV8 164 aa17.08■□□□□ 0.33
CDHR3-207ENST00000470188 J3QT63 122 aa17.08■□□□□ 0.33
CDHR3-207ENST00000470188 IFNA10P01566 189 aa17.08■□□□□ 0.33
CDHR3-207ENST00000470188 SELENOHQ8IZQ5 122 aaKnown RBP17.08■□□□□ 0.33
CDHR3-207ENST00000470188 RBMXL1Q96E39 390 aaKnown RBP17.08■□□□□ 0.33
CDHR3-207ENST00000470188 C14orf144Q96I85 54 aa17.08■□□□□ 0.33
CDHR3-207ENST00000470188 GPHA2Q96T91 129 aa17.08■□□□□ 0.33
CDHR3-207ENST00000470188 SPIN2AQ99865 258 aa17.08■□□□□ 0.33
CDHR3-207ENST00000470188 SPIN2BQ9BPZ2 258 aa17.08■□□□□ 0.33
CDHR3-207ENST00000470188 SLC25A31Q9H0C2 315 aa17.08■□□□□ 0.33
CDHR3-207ENST00000470188 PLEKHF2Q9H8W4 249 aa17.08■□□□□ 0.33
CDHR3-207ENST00000470188 CCL28Q9NRJ3 127 aa17.08■□□□□ 0.33
CDHR3-207ENST00000470188 C3orf80F5H4A9 247 aa17.08■□□□□ 0.32
CDHR3-207ENST00000470188 SCAF4O95104 1147 aaKnown RBP17.08■□□□□ 0.32
CDHR3-207ENST00000470188 IGFBP7Q16270 282 aa17.08■□□□□ 0.32
CDHR3-207ENST00000470188 MYPOPQ86VE0 399 aaPredicted RBP17.08■□□□□ 0.32
CDHR3-207ENST00000470188 CMTM1Q8IZ96 169 aa17.08■□□□□ 0.32
CDHR3-207ENST00000470188 HIST3H2BBQ8N257 126 aa17.08■□□□□ 0.32
CDHR3-207ENST00000470188 GNPNAT1Q96EK6 184 aaPredicted RBP17.08■□□□□ 0.32
CDHR3-207ENST00000470188 ABHD14BQ96IU4 210 aa17.08■□□□□ 0.32
CDHR3-207ENST00000470188 RTL8AQ9BWD3 113 aa17.08■□□□□ 0.32
CDHR3-207ENST00000470188 DLL3Q9NYJ7 618 aa17.08■□□□□ 0.32
CDHR3-207ENST00000470188 J3QW42 95 aa17.07■□□□□ 0.32
CDHR3-207ENST00000470188 PTBP3O95758 552 aaKnown RBP17.07■□□□□ 0.32
CDHR3-207ENST00000470188 CELA3BP08861 270 aa17.07■□□□□ 0.32
CDHR3-207ENST00000470188 CD82P27701 267 aa17.07■□□□□ 0.32
CDHR3-207ENST00000470188 ERVFRD-1P60508 538 aa17.07■□□□□ 0.32
CDHR3-207ENST00000470188 MRPL49Q13405 166 aaKnown RBP17.07■□□□□ 0.32
CDHR3-207ENST00000470188 ICAM4Q14773 271 aa17.07■□□□□ 0.32
CDHR3-207ENST00000470188 ZNF343Q6P1L6 599 aa17.07■□□□□ 0.32
CDHR3-207ENST00000470188 PCSK4Q6UW60 755 aa17.07■□□□□ 0.32
CDHR3-207ENST00000470188 SPNS3Q6ZMD2 512 aa17.07■□□□□ 0.32
CDHR3-207ENST00000470188 WSB1Q9Y6I7 421 aa17.07■□□□□ 0.32
CDHR3-207ENST00000470188 A0A1W2PR80 420 aa17.06■□□□□ 0.32
CDHR3-207ENST00000470188 FAM24AA6NFZ4 105 aa17.06■□□□□ 0.32
CDHR3-207ENST00000470188 H0YL77 283 aa17.06■□□□□ 0.32
CDHR3-207ENST00000470188 HBE1P02100 147 aa17.06■□□□□ 0.32
CDHR3-207ENST00000470188 NKX2-1P43699 371 aaPredicted RBP17.06■□□□□ 0.32
CDHR3-207ENST00000470188 UBE2NP61088 152 aaKnown RBP17.06■□□□□ 0.32
CDHR3-207ENST00000470188 PKIAP61925 76 aa17.06■□□□□ 0.32
CDHR3-207ENST00000470188 TGFBR3Q03167 851 aa17.06■□□□□ 0.32
CDHR3-207ENST00000470188 HAGHQ16775 308 aa17.06■□□□□ 0.32
CDHR3-207ENST00000470188 CDPF1Q6NVV7 123 aa17.06■□□□□ 0.32
CDHR3-207ENST00000470188 DPPA3Q6W0C5 159 aa17.06■□□□□ 0.32
CDHR3-207ENST00000470188 OR10G4Q8NGN3 311 aa17.06■□□□□ 0.32
CDHR3-207ENST00000470188 DOCK7Q96N67 2140 aa17.06■□□□□ 0.32
CDHR3-207ENST00000470188 PCNX2A6NKB5 2137 aa17.06■□□□□ 0.32
CDHR3-207ENST00000470188 DEGS1O15121 323 aa17.06■□□□□ 0.32
CDHR3-207ENST00000470188 NKX2-8O15522 239 aa17.06■□□□□ 0.32
CDHR3-207ENST00000470188 SMPD2O60906 423 aa17.06■□□□□ 0.32
CDHR3-207ENST00000470188 UCP1P25874 307 aa17.06■□□□□ 0.32
CDHR3-207ENST00000470188 IDH3GP51553 393 aaPredicted RBP17.06■□□□□ 0.32
CDHR3-207ENST00000470188 PPP1CBP62140 327 aa17.06■□□□□ 0.32
CDHR3-207ENST00000470188 HLA-DRB3P79483 266 aa17.06■□□□□ 0.32
CDHR3-207ENST00000470188 ZNF880Q6PDB4 577 aa17.06■□□□□ 0.32
CDHR3-207ENST00000470188 REC114Q7Z4M0 266 aa17.06■□□□□ 0.32
CDHR3-207ENST00000470188 GCNT2Q8N0V5 402 aa17.06■□□□□ 0.32
CDHR3-207ENST00000470188 SUMF1Q8NBK3 374 aa17.06■□□□□ 0.32
CDHR3-207ENST00000470188 S100PBPQ96BU1 408 aa17.06■□□□□ 0.32
CDHR3-207ENST00000470188 CDH20Q9HBT6 801 aa17.06■□□□□ 0.32
CDHR3-207ENST00000470188 FAM186AA6NE01 2351 aa17.06■□□□□ 0.32
CDHR3-207ENST00000470188 DUXBA0A1W2PPF3 345 aa17.05■□□□□ 0.32
CDHR3-207ENST00000470188 IGSF23A1L1A6 192 aa17.05■□□□□ 0.32
CDHR3-207ENST00000470188 OR5H1A6NKK0 313 aa17.05■□□□□ 0.32
CDHR3-207ENST00000470188 CDRT15L2A8MXV6 281 aa17.05■□□□□ 0.32
CDHR3-207ENST00000470188 PRR33A8MZF0 331 aa17.05■□□□□ 0.32
CDHR3-207ENST00000470188 CYB5BO43169 146 aa17.05■□□□□ 0.32
CDHR3-207ENST00000470188 ADAM20O43506 726 aa17.05■□□□□ 0.32
CDHR3-207ENST00000470188 LY86O95711 162 aa17.05■□□□□ 0.32
CDHR3-207ENST00000470188 IGHV1-2P23083 117 aa17.05■□□□□ 0.32
CDHR3-207ENST00000470188 KHDC3LQ587J8 217 aa17.05■□□□□ 0.32
CDHR3-207ENST00000470188 SSX9Q7RTT3 188 aa17.05■□□□□ 0.32
CDHR3-207ENST00000470188 CYB561D1Q8N8Q1 229 aa17.05■□□□□ 0.32
CDHR3-207ENST00000470188 OR10J5Q8NHC4 309 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms