RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 IFNA6P05013 189 aa11.19□□□□□ -0.62
LINC00173-201ENST00000470091 H2AFB2P0C5Z0 115 aa11.19□□□□□ -0.62
LINC00173-201ENST00000470091 DUX4L2P0CJ85 424 aa11.19□□□□□ -0.62
LINC00173-201ENST00000470091 DUX4L3P0CJ86 424 aa11.19□□□□□ -0.62
LINC00173-201ENST00000470091 DUX4L4P0CJ87 422 aa11.19□□□□□ -0.62
LINC00173-201ENST00000470091 DUX4L5P0CJ88 424 aa11.19□□□□□ -0.62
LINC00173-201ENST00000470091 DUX4L6P0CJ89 424 aa11.19□□□□□ -0.62
LINC00173-201ENST00000470091 DUX4L7P0CJ90 424 aa11.19□□□□□ -0.62
LINC00173-201ENST00000470091 OMGP23515 440 aa11.19□□□□□ -0.62
LINC00173-201ENST00000470091 OR3A3P47888 321 aa11.19□□□□□ -0.62
LINC00173-201ENST00000470091 RBMS2Q15434 407 aaKnown RBP11.19□□□□□ -0.62
LINC00173-201ENST00000470091 GRK1Q15835 563 aa11.19□□□□□ -0.62
LINC00173-201ENST00000470091 TUSC1Q2TAM9 212 aa11.19□□□□□ -0.62
LINC00173-201ENST00000470091 ZNF880Q6PDB4 577 aa11.19□□□□□ -0.62
LINC00173-201ENST00000470091 DUX4L9Q6RFH8 374 aaPredicted RBP11.19□□□□□ -0.62
LINC00173-201ENST00000470091 IDO2Q6ZQW0 420 aa11.19□□□□□ -0.62
LINC00173-201ENST00000470091 CCDC107Q8WV48 283 aa11.19□□□□□ -0.62
LINC00173-201ENST00000470091 COQ2Q96H96 371 aa11.19□□□□□ -0.62
LINC00173-201ENST00000470091 GAFA1Q96PS6 74 aa11.19□□□□□ -0.62
LINC00173-201ENST00000470091 PRRT1Q99946 306 aa11.19□□□□□ -0.62
LINC00173-201ENST00000470091 MARVELD1Q9BSK0 173 aa11.19□□□□□ -0.62
LINC00173-201ENST00000470091 RIMS4Q9H426 269 aaPredicted RBP11.19□□□□□ -0.62
LINC00173-201ENST00000470091 SEBOXQ9HB31 216 aaPredicted RBP11.19□□□□□ -0.62
LINC00173-201ENST00000470091 SLC2A8Q9NY64 477 aa11.19□□□□□ -0.62
LINC00173-201ENST00000470091 DUX4Q9UBX2 424 aa11.19□□□□□ -0.62
LINC00173-201ENST00000470091 DOCK11Q5JSL3 2073 aa11.19□□□□□ -0.62
LINC00173-201ENST00000470091 VWFP04275 2813 aa11.18□□□□□ -0.62
LINC00173-201ENST00000470091 CMYA5Q8N3K9 4069 aa11.18□□□□□ -0.62
LINC00173-201ENST00000470091 IGHV2-70DA0A0C4DH43 119 aa11.18□□□□□ -0.62
LINC00173-201ENST00000470091 NKX6-3A6NJ46 265 aa11.18□□□□□ -0.62
LINC00173-201ENST00000470091 RNASE1P07998 156 aaKnown RBP11.18□□□□□ -0.62
LINC00173-201ENST00000470091 GSTT2P0CG29 244 aa11.18□□□□□ -0.62
LINC00173-201ENST00000470091 MUC1P15941 1255 aaPredicted RBP11.18□□□□□ -0.62
LINC00173-201ENST00000470091 KCNJ3P48549 501 aa11.18□□□□□ -0.62
LINC00173-201ENST00000470091 HLA-DRB3P79483 266 aa11.18□□□□□ -0.62
LINC00173-201ENST00000470091 PAX2Q02962 417 aa11.18□□□□□ -0.62
LINC00173-201ENST00000470091 EDDM3AQ14507 147 aa11.18□□□□□ -0.62
LINC00173-201ENST00000470091 PRR31Q5SQ13 230 aa11.18□□□□□ -0.62
LINC00173-201ENST00000470091 LYPD2Q6UXB3 125 aa11.18□□□□□ -0.62
LINC00173-201ENST00000470091 BRD3OSQ6XYD6 125 aa11.18□□□□□ -0.62
LINC00173-201ENST00000470091 Q6ZS49 121 aa11.18□□□□□ -0.62
LINC00173-201ENST00000470091 MOB1BQ7L9L4 216 aa11.18□□□□□ -0.62
LINC00173-201ENST00000470091 GAPTQ8N292 157 aa11.18□□□□□ -0.62
LINC00173-201ENST00000470091 OR13C8Q8NGS7 320 aa11.18□□□□□ -0.62
LINC00173-201ENST00000470091 NEIL1Q96FI4 390 aaPredicted RBP11.18□□□□□ -0.62
LINC00173-201ENST00000470091 SDSLQ96GA7 329 aa11.18□□□□□ -0.62
LINC00173-201ENST00000470091 CCL13Q99616 98 aa11.18□□□□□ -0.62
LINC00173-201ENST00000470091 NECAP2Q9NVZ3 263 aa11.18□□□□□ -0.62
LINC00173-201ENST00000470091 KIF25Q9UIL4 384 aa11.18□□□□□ -0.62
LINC00173-201ENST00000470091 SCP2D1Q9UJQ7 156 aa11.18□□□□□ -0.62
LINC00173-201ENST00000470091 TRAV38-1A0A0B4J264 116 aa11.17□□□□□ -0.62
LINC00173-201ENST00000470091 TRAV40A0A0B4J280 105 aa11.17□□□□□ -0.62
LINC00173-201ENST00000470091 KIR2DS1A0A191URI9 304 aa11.17□□□□□ -0.62
LINC00173-201ENST00000470091 FABP7O15540 132 aa11.17□□□□□ -0.62
LINC00173-201ENST00000470091 RCC1P18754 421 aaPredicted RBP11.17□□□□□ -0.62
LINC00173-201ENST00000470091 TSPAN5P62079 268 aa11.17□□□□□ -0.62
LINC00173-201ENST00000470091 IL13RA1P78552 427 aa11.17□□□□□ -0.62
LINC00173-201ENST00000470091 AESQ08117 197 aa11.17□□□□□ -0.62
LINC00173-201ENST00000470091 SRSF7Q16629 238 aaKnown RBP eCLIP11.17□□□□□ -0.62
LINC00173-201ENST00000470091 TATDN3Q17R31 274 aa11.17□□□□□ -0.62
LINC00173-201ENST00000470091 KRBOX4Q5JUW0 171 aa11.17□□□□□ -0.62
LINC00173-201ENST00000470091 SLC35E4Q6ICL7 350 aa11.17□□□□□ -0.62
LINC00173-201ENST00000470091 OVCH2Q7RTZ1 564 aa11.17□□□□□ -0.62
LINC00173-201ENST00000470091 ARRDC1Q8N5I2 433 aa11.17□□□□□ -0.62
LINC00173-201ENST00000470091 FAM216BQ8N7L0 139 aa11.17□□□□□ -0.62
LINC00173-201ENST00000470091 TPRX1Q8N7U7 411 aa11.17□□□□□ -0.62
LINC00173-201ENST00000470091 ZNRF1Q8ND25 227 aa11.17□□□□□ -0.62
LINC00173-201ENST00000470091 TMEM185AQ8NFB2 350 aa11.17□□□□□ -0.62
LINC00173-201ENST00000470091 OR8B3Q8NGG8 313 aa11.17□□□□□ -0.62
LINC00173-201ENST00000470091 ZDHHC16Q969W1 377 aa11.17□□□□□ -0.62
LINC00173-201ENST00000470091 MRGPRFQ96AM1 343 aa11.17□□□□□ -0.62
LINC00173-201ENST00000470091 SNX22Q96L94 193 aa11.17□□□□□ -0.62
LINC00173-201ENST00000470091 OR8B2Q96RD0 313 aa11.17□□□□□ -0.62
LINC00173-201ENST00000470091 BEX1Q9HBH7 125 aa11.17□□□□□ -0.62
LINC00173-201ENST00000470091 CLN8Q9UBY8 286 aa11.17□□□□□ -0.62
LINC00173-201ENST00000470091 TRAPPC2LQ9UL33 140 aa11.17□□□□□ -0.62
LINC00173-201ENST00000470091 MAB21L2Q9Y586 359 aa11.17□□□□□ -0.62
LINC00173-201ENST00000470091 ALG5Q9Y673 324 aa11.17□□□□□ -0.62
LINC00173-201ENST00000470091 NOTCH1P46531 2555 aa11.17□□□□□ -0.62
LINC00173-201ENST00000470091 MEIKINA0A087WXM9 373 aa11.16□□□□□ -0.62
LINC00173-201ENST00000470091 FUOMA2VDF0 154 aa11.16□□□□□ -0.62
LINC00173-201ENST00000470091 POM121CA8CG34 1229 aa11.16□□□□□ -0.62
LINC00173-201ENST00000470091 TRDCB7Z8K6 153 aa11.16□□□□□ -0.62
LINC00173-201ENST00000470091 SIGLEC5O15389 551 aa11.16□□□□□ -0.62
LINC00173-201ENST00000470091 HOXA3O43365 443 aaPredicted RBP11.16□□□□□ -0.62
LINC00173-201ENST00000470091 RLN1P04808 185 aa11.16□□□□□ -0.62
LINC00173-201ENST00000470091 SCTP09683 121 aa11.16□□□□□ -0.62
LINC00173-201ENST00000470091 OR5H8P0DN80 308 aa11.16□□□□□ -0.62
LINC00173-201ENST00000470091 ANXA7P20073 488 aaKnown RBP11.16□□□□□ -0.62
LINC00173-201ENST00000470091 MDKP21741 143 aaPredicted RBP11.16□□□□□ -0.62
LINC00173-201ENST00000470091 KIR2DS4P43632 304 aa11.16□□□□□ -0.62
LINC00173-201ENST00000470091 GLIPR1P48060 266 aa11.16□□□□□ -0.62
LINC00173-201ENST00000470091 BCAP31P51572 246 aa11.16□□□□□ -0.62
LINC00173-201ENST00000470091 KIR2DS1Q14954 304 aa11.16□□□□□ -0.62
LINC00173-201ENST00000470091 DEFB112Q30KQ8 113 aa11.16□□□□□ -0.62
LINC00173-201ENST00000470091 IGSF11Q5DX21 431 aa11.16□□□□□ -0.62
LINC00173-201ENST00000470091 ZNF788Q6ZQV5 615 aa11.16□□□□□ -0.62
LINC00173-201ENST00000470091 NLRC3Q7RTR2 1065 aa11.16□□□□□ -0.62
LINC00173-201ENST00000470091 TMEM17Q86X19 198 aa11.16□□□□□ -0.62
LINC00173-201ENST00000470091 CADM3Q8N126 398 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms