RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 SC5DO75845 299 aa13.71□□□□□ -0.21
COL7A1-208ENST00000470076 IGHG4P01861 327 aa13.71□□□□□ -0.21
COL7A1-208ENST00000470076 MGMTP16455 207 aa13.71□□□□□ -0.21
COL7A1-208ENST00000470076 RCC1P18754 421 aaPredicted RBP13.71□□□□□ -0.21
COL7A1-208ENST00000470076 VDAC1P21796 283 aa13.71□□□□□ -0.21
COL7A1-208ENST00000470076 VHLP40337 213 aa13.71□□□□□ -0.21
COL7A1-208ENST00000470076 RAB25P57735 213 aa13.71□□□□□ -0.21
COL7A1-208ENST00000470076 ST3GAL4Q11206 333 aa13.71□□□□□ -0.21
COL7A1-208ENST00000470076 ZNF554Q86TJ5 538 aa13.71□□□□□ -0.21
COL7A1-208ENST00000470076 PRR18Q8N4B5 295 aa13.71□□□□□ -0.21
COL7A1-208ENST00000470076 OR10V1Q8NGI7 309 aa13.71□□□□□ -0.21
COL7A1-208ENST00000470076 OR5M8Q8NGP6 311 aa13.71□□□□□ -0.21
COL7A1-208ENST00000470076 OR1L1Q8NH94 360 aa13.71□□□□□ -0.21
COL7A1-208ENST00000470076 SELENOIQ9C0D9 397 aa13.71□□□□□ -0.21
COL7A1-208ENST00000470076 C8orf4Q9NR00 106 aa13.71□□□□□ -0.21
COL7A1-208ENST00000470076 ZNF580Q9UK33 172 aa13.71□□□□□ -0.21
COL7A1-208ENST00000470076 EBAG9O00559 213 aa13.7□□□□□ -0.22
COL7A1-208ENST00000470076 MAS1P04201 325 aa13.7□□□□□ -0.22
COL7A1-208ENST00000470076 IGF1P05019 195 aa13.7□□□□□ -0.22
COL7A1-208ENST00000470076 OR5H8P0DN80 308 aa13.7□□□□□ -0.22
COL7A1-208ENST00000470076 FUT3P21217 361 aa13.7□□□□□ -0.22
COL7A1-208ENST00000470076 CAPGP40121 348 aa13.7□□□□□ -0.22
COL7A1-208ENST00000470076 F2RL1P55085 397 aa13.7□□□□□ -0.22
COL7A1-208ENST00000470076 CFHR3Q02985 330 aa13.7□□□□□ -0.22
COL7A1-208ENST00000470076 DOC2BQ14184 412 aa13.7□□□□□ -0.22
COL7A1-208ENST00000470076 LCNL1Q6ZST4 164 aa13.7□□□□□ -0.22
COL7A1-208ENST00000470076 NKAIN3Q8N8D7 197 aa13.7□□□□□ -0.22
COL7A1-208ENST00000470076 THRSPQ92748 146 aa13.7□□□□□ -0.22
COL7A1-208ENST00000470076 GGHQ92820 318 aa13.7□□□□□ -0.22
COL7A1-208ENST00000470076 Q96M66 194 aa13.7□□□□□ -0.22
COL7A1-208ENST00000470076 DERL3Q96Q80 235 aa13.7□□□□□ -0.22
COL7A1-208ENST00000470076 HSPB9Q9BQS6 159 aa13.7□□□□□ -0.22
COL7A1-208ENST00000470076 CHCHD6Q9BRQ6 235 aa13.7□□□□□ -0.22
COL7A1-208ENST00000470076 BANF2Q9H503 90 aa13.7□□□□□ -0.22
COL7A1-208ENST00000470076 TAF9BQ9HBM6 251 aa13.7□□□□□ -0.22
COL7A1-208ENST00000470076 OR2S2Q9NQN1 319 aa13.7□□□□□ -0.22
COL7A1-208ENST00000470076 MBNL3Q9NUK0 354 aaKnown RBP13.7□□□□□ -0.22
COL7A1-208ENST00000470076 EFCAB10A6NFE3 127 aa13.69□□□□□ -0.22
COL7A1-208ENST00000470076 CRTAPO75718 401 aaPredicted RBP13.69□□□□□ -0.22
COL7A1-208ENST00000470076 CD1AP06126 327 aa13.69□□□□□ -0.22
COL7A1-208ENST00000470076 LSAMPQ13449 338 aa13.69□□□□□ -0.22
COL7A1-208ENST00000470076 LRRC36Q1X8D7 754 aa13.69□□□□□ -0.22
COL7A1-208ENST00000470076 DEFB136Q30KP8 78 aa13.69□□□□□ -0.22
COL7A1-208ENST00000470076 MORN2Q502X0 79 aa13.69□□□□□ -0.22
COL7A1-208ENST00000470076 C9orf66Q5T8R8 295 aa13.69□□□□□ -0.22
COL7A1-208ENST00000470076 LYPD6Q86Y78 171 aa13.69□□□□□ -0.22
COL7A1-208ENST00000470076 DHRSXQ8N5I4 330 aa13.69□□□□□ -0.22
COL7A1-208ENST00000470076 PACRGLQ8N7B6 248 aa13.69□□□□□ -0.22
COL7A1-208ENST00000470076 TFAP2CQ92754 450 aa13.69□□□□□ -0.22
COL7A1-208ENST00000470076 UQCC2Q9BRT2 126 aa13.69□□□□□ -0.22
COL7A1-208ENST00000470076 KCNIP1Q9NZI2 227 aa13.69□□□□□ -0.22
COL7A1-208ENST00000470076 CNOT2Q9NZN8 540 aaKnown RBP13.69□□□□□ -0.22
COL7A1-208ENST00000470076 PNMA8CA0A1B0GUJ8 204 aa13.68□□□□□ -0.22
COL7A1-208ENST00000470076 CELP19835 753 aa13.68□□□□□ -0.22
COL7A1-208ENST00000470076 MAPK3P27361 379 aaPredicted RBP13.68□□□□□ -0.22
COL7A1-208ENST00000470076 PSMB8P28062 276 aa13.68□□□□□ -0.22
COL7A1-208ENST00000470076 ADARB1P78563 741 aaKnown RBP13.68□□□□□ -0.22
COL7A1-208ENST00000470076 SIGIRRQ6IA17 410 aa13.68□□□□□ -0.22
COL7A1-208ENST00000470076 C4orf3Q8WVX3 66 aa13.68□□□□□ -0.22
COL7A1-208ENST00000470076 KCTD7Q96MP8 289 aa13.68□□□□□ -0.22
COL7A1-208ENST00000470076 WWC2-AS2Q96NR7 200 aa13.68□□□□□ -0.22
COL7A1-208ENST00000470076 GHRLQ9UBU3 117 aa13.68□□□□□ -0.22
COL7A1-208ENST00000470076 ZNF107Q9UII5 783 aaPredicted RBP13.68□□□□□ -0.22
COL7A1-208ENST00000470076 JPT1Q9UK76 154 aa13.68□□□□□ -0.22
COL7A1-208ENST00000470076 UBE2QL1A1L167 161 aa13.67□□□□□ -0.22
COL7A1-208ENST00000470076 MYL12BO14950 172 aa13.67□□□□□ -0.22
COL7A1-208ENST00000470076 PDCD6O75340 191 aa13.67□□□□□ -0.22
COL7A1-208ENST00000470076 LUMP51884 338 aaPredicted RBP13.67□□□□□ -0.22
COL7A1-208ENST00000470076 WNT4P56705 351 aa13.67□□□□□ -0.22
COL7A1-208ENST00000470076 HTD2P86397 168 aa13.67□□□□□ -0.22
COL7A1-208ENST00000470076 MMDQ15546 238 aa13.67□□□□□ -0.22
COL7A1-208ENST00000470076 ABHD14AQ9BUJ0 271 aa13.67□□□□□ -0.22
COL7A1-208ENST00000470076 CST11Q9H112 138 aa13.67□□□□□ -0.22
COL7A1-208ENST00000470076 NHLRC4P0CG21 123 aaPredicted RBP13.66□□□□□ -0.22
COL7A1-208ENST00000470076 SLC2A2P11168 524 aaPredicted RBP13.66□□□□□ -0.22
COL7A1-208ENST00000470076 FHL3Q13643 280 aa13.66□□□□□ -0.22
COL7A1-208ENST00000470076 GNMTQ14749 295 aa13.66□□□□□ -0.22
COL7A1-208ENST00000470076 LY6G6FQ5SQ64 297 aa13.66□□□□□ -0.22
COL7A1-208ENST00000470076 OR52L2PQ8NGH6 319 aa13.66□□□□□ -0.22
COL7A1-208ENST00000470076 MRPL30Q8TCC3 161 aaKnown RBP13.66□□□□□ -0.22
COL7A1-208ENST00000470076 MYOZ3Q8TDC0 251 aa13.66□□□□□ -0.22
COL7A1-208ENST00000470076 RBMXL1Q96E39 390 aaKnown RBP13.66□□□□□ -0.22
COL7A1-208ENST00000470076 PSORS1C1Q9UIG5 152 aa13.66□□□□□ -0.22
COL7A1-208ENST00000470076 LRRC42Q9Y546 428 aa13.66□□□□□ -0.22
COL7A1-208ENST00000470076 SEC14L6B5MCN3 397 aa13.65□□□□□ -0.22
COL7A1-208ENST00000470076 YPEL1O60688 119 aa13.65□□□□□ -0.22
COL7A1-208ENST00000470076 RGS11O94810 467 aa13.65□□□□□ -0.22
COL7A1-208ENST00000470076 HLA-DRB1P01911 266 aa13.65□□□□□ -0.22
COL7A1-208ENST00000470076 UBBP0CG47 229 aa13.65□□□□□ -0.22
COL7A1-208ENST00000470076 MYF6P23409 242 aa13.65□□□□□ -0.22
COL7A1-208ENST00000470076 PPP1CCP36873 323 aaKnown RBP13.65□□□□□ -0.22
COL7A1-208ENST00000470076 ACTBP60709 375 aa13.65□□□□□ -0.22
COL7A1-208ENST00000470076 TMEM65Q6PI78 240 aa13.65□□□□□ -0.22
COL7A1-208ENST00000470076 ODF3L1Q8IXM7 274 aa13.65□□□□□ -0.22
COL7A1-208ENST00000470076 C8orf59Q8N0T1 100 aaPredicted RBP13.65□□□□□ -0.22
COL7A1-208ENST00000470076 FAM46BQ96A09 425 aa13.65□□□□□ -0.22
COL7A1-208ENST00000470076 GALMQ96C23 342 aa13.65□□□□□ -0.22
COL7A1-208ENST00000470076 UBE2E2Q96LR5 201 aa13.65□□□□□ -0.22
COL7A1-208ENST00000470076 YPEL2Q96QA6 119 aa13.65□□□□□ -0.22
COL7A1-208ENST00000470076 ZNF251Q9BRH9 671 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms