RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 KCNIP1Q9NZI2 227 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 SLC23A1Q9UHI7 598 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 JPT1Q9UK76 154 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 DOCK11Q5JSL3 2073 aa6.71□□□□□ -1.34
NPHP3-204ENST00000469232 TRAV39A0A0B4J263 110 aa6.7□□□□□ -1.34
NPHP3-204ENST00000469232 SPINT2O43291 252 aa6.7□□□□□ -1.34
NPHP3-204ENST00000469232 YPEL1O60688 119 aa6.7□□□□□ -1.34
NPHP3-204ENST00000469232 PMP2P02689 132 aa6.7□□□□□ -1.34
NPHP3-204ENST00000469232 AMY2AP04746 511 aa6.7□□□□□ -1.34
NPHP3-204ENST00000469232 FCER2P06734 321 aa6.7□□□□□ -1.34
NPHP3-204ENST00000469232 NDUFB7P17568 137 aa6.7□□□□□ -1.34
NPHP3-204ENST00000469232 SSTR5P35346 364 aa6.7□□□□□ -1.34
NPHP3-204ENST00000469232 ECI1P42126 302 aa6.7□□□□□ -1.34
NPHP3-204ENST00000469232 OR3A3P47888 321 aa6.7□□□□□ -1.34
NPHP3-204ENST00000469232 INPP1P49441 399 aa6.7□□□□□ -1.34
NPHP3-204ENST00000469232 EDDM3AQ14507 147 aa6.7□□□□□ -1.34
NPHP3-204ENST00000469232 Q6ZNX1 250 aa6.7□□□□□ -1.34
NPHP3-204ENST00000469232 C5orf24Q7Z6I8 188 aa6.7□□□□□ -1.34
NPHP3-204ENST00000469232 LDLRAD3Q86YD5 345 aa6.7□□□□□ -1.34
NPHP3-204ENST00000469232 ZDHHC22Q8N966 263 aa6.7□□□□□ -1.34
NPHP3-204ENST00000469232 ZNF439Q8NDP4 499 aa6.7□□□□□ -1.34
NPHP3-204ENST00000469232 ARL11Q969Q4 196 aa6.7□□□□□ -1.34
NPHP3-204ENST00000469232 KIRREL1Q96J84 757 aa6.7□□□□□ -1.34
NPHP3-204ENST00000469232 YPEL2Q96QA6 119 aa6.7□□□□□ -1.34
NPHP3-204ENST00000469232 SSBP3Q9BWW4 388 aaPredicted RBP6.7□□□□□ -1.34
NPHP3-204ENST00000469232 DPAGT1Q9H3H5 408 aa6.7□□□□□ -1.34
NPHP3-204ENST00000469232 EHFQ9NZC4 300 aa6.7□□□□□ -1.34
NPHP3-204ENST00000469232 SCP2D1Q9UJQ7 156 aa6.7□□□□□ -1.34
NPHP3-204ENST00000469232 GAB2Q9UQC2 676 aa6.7□□□□□ -1.34
NPHP3-204ENST00000469232 KIAA2026Q5HYC2 2103 aa6.7□□□□□ -1.34
NPHP3-204ENST00000469232 ABCA2Q9BZC7 2435 aa6.7□□□□□ -1.34
NPHP3-204ENST00000469232 CSMD2Q7Z408 3487 aa6.69□□□□□ -1.34
NPHP3-204ENST00000469232 FAM240BA0A1B0GVZ2 78 aa6.69□□□□□ -1.34
NPHP3-204ENST00000469232 OR5H14A6NHG9 310 aa6.69□□□□□ -1.34
NPHP3-204ENST00000469232 M0R1W7 72 aa6.69□□□□□ -1.34
NPHP3-204ENST00000469232 SDCBPO00560 298 aaPredicted RBP6.69□□□□□ -1.34
NPHP3-204ENST00000469232 TCRBP04435 133 aa6.69□□□□□ -1.34
NPHP3-204ENST00000469232 LIPFP07098 398 aa6.69□□□□□ -1.34
NPHP3-204ENST00000469232 SPNP16150 400 aa6.69□□□□□ -1.34
NPHP3-204ENST00000469232 ZFP36P26651 326 aaKnown RBP6.69□□□□□ -1.34
NPHP3-204ENST00000469232 GLP1RP43220 463 aa6.69□□□□□ -1.34
NPHP3-204ENST00000469232 EDDM3BP56851 147 aa6.69□□□□□ -1.34
NPHP3-204ENST00000469232 ARPC4P59998 168 aa6.69□□□□□ -1.34
NPHP3-204ENST00000469232 RBMS2Q15434 407 aaKnown RBP6.69□□□□□ -1.34
NPHP3-204ENST00000469232 ESCO2Q56NI9 601 aa6.69□□□□□ -1.34
NPHP3-204ENST00000469232 FAAP20Q6NZ36 180 aa6.69□□□□□ -1.34
NPHP3-204ENST00000469232 CCBE1Q6UXH8 406 aaPredicted RBP6.69□□□□□ -1.34
NPHP3-204ENST00000469232 TMEM17Q86X19 198 aa6.69□□□□□ -1.34
NPHP3-204ENST00000469232 CENPSQ8N2Z9 138 aa6.69□□□□□ -1.34
NPHP3-204ENST00000469232 LINC00311Q8N616 119 aa6.69□□□□□ -1.34
NPHP3-204ENST00000469232 Q8N7P7 452 aa6.69□□□□□ -1.34
NPHP3-204ENST00000469232 OR6F1Q8NGZ6 308 aa6.69□□□□□ -1.34
NPHP3-204ENST00000469232 CREB3L1Q96BA8 519 aa6.69□□□□□ -1.34
NPHP3-204ENST00000469232 GALMQ96C23 342 aa6.69□□□□□ -1.34
NPHP3-204ENST00000469232 ZNF714Q96N38 554 aa6.69□□□□□ -1.34
NPHP3-204ENST00000469232 AGMATQ9BSE5 352 aa6.69□□□□□ -1.34
NPHP3-204ENST00000469232 FXYD6Q9H0Q3 95 aa6.69□□□□□ -1.34
NPHP3-204ENST00000469232 GAL3ST2Q9H3Q3 398 aa6.69□□□□□ -1.34
NPHP3-204ENST00000469232 GFOD1Q9NXC2 390 aa6.69□□□□□ -1.34
NPHP3-204ENST00000469232 IDI2-AS1Q9NZ38 188 aa6.69□□□□□ -1.34
NPHP3-204ENST00000469232 ZNF221Q9UK13 617 aa6.69□□□□□ -1.34
NPHP3-204ENST00000469232 GPR132Q9UNW8 380 aa6.69□□□□□ -1.34
NPHP3-204ENST00000469232 OR2W1Q9Y3N9 320 aa6.69□□□□□ -1.34
NPHP3-204ENST00000469232 NUBP2Q9Y5Y2 271 aa6.69□□□□□ -1.34
NPHP3-204ENST00000469232 LOC105371242A0A075B767 164 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 IGHV2-70DA0A0C4DH43 119 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 FOXH1O75593 365 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 MMP23AO75900 390 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 PPYP01298 95 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 IFNA6P05013 189 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 USF1P22415 310 aaPredicted RBP6.68□□□□□ -1.34
NPHP3-204ENST00000469232 ZBTB25P24278 435 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 FCGR2CP31995 323 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 CCR6P51684 374 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 GNB2P62879 340 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 DHODHQ02127 395 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 EIF4EBP1Q13541 118 aaPredicted RBP6.68□□□□□ -1.34
NPHP3-204ENST00000469232 CARTPTQ16568 116 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 MORN2Q502X0 79 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 FAHD2BQ6P2I3 314 aaPredicted RBP6.68□□□□□ -1.34
NPHP3-204ENST00000469232 ZNF782Q6ZMW2 699 aaPredicted RBP6.68□□□□□ -1.34
NPHP3-204ENST00000469232 IDO2Q6ZQW0 420 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 OR10J5Q8NHC4 309 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 UPRTQ96BW1 309 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 FAHD2AQ96GK7 314 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 OR1A1Q9P1Q5 309 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 KPTNQ9Y664 436 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 YLPM1P49750 1951 aaKnown RBP6.68□□□□□ -1.34
NPHP3-204ENST00000469232 IGKV1D-13A0A0B4J2D9 117 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 LINC00854A0A1B0GVQ3 168 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 A0A1W2PPH5 198 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 C7orf66A4D0T2 115 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 FAM157AC9JC47 383 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 PHF1O43189 567 aaPredicted RBP6.68□□□□□ -1.34
NPHP3-204ENST00000469232 ENSAO43768 121 aaKnown RBP6.68□□□□□ -1.34
NPHP3-204ENST00000469232 IGLV2-14P01704 120 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 IL5P05113 134 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 CTSDP07339 412 aaPredicted RBP6.68□□□□□ -1.34
NPHP3-204ENST00000469232 PPIAL4GP0DN37 164 aa6.68□□□□□ -1.34
NPHP3-204ENST00000469232 IGKV1-13P0DP09 117 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms