RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 NMNAT3Q96T66 252 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 CCDC3Q9BQI4 270 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 LINC00597Q9H2U6 94 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 MS4A6AQ9H2W1 248 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 PARLQ9H300 379 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 ZDHHC11Q9H8X9 412 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 ELOVL3Q9HB03 270 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 FGF21Q9NSA1 209 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 LRIT1Q9P2V4 623 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 GNG13Q9P2W3 67 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 KLHDC2Q9Y2U9 406 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 PLXNB3Q9ULL4 1909 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 COL6A3P12111 3177 aa4.18□□□□□ -1.74
SF3B1-207ENST00000468925 HELZP42694 1942 aaKnown RBP4.17□□□□□ -1.74
SF3B1-207ENST00000468925 LOC102725191A0A1B0GVB3 256 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 A0A1B0GWA3 101 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 LRP5LA4QPB2 252 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 FAM90A18PA6NE21 464 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 FAM90A16PA6NEW6 464 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 FAM90A20PA6NIJ5 464 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 FAM90A9PA6NNJ1 464 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 CEBPZOSA8MTT3 80 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 FAM90A5PA8MXJ8 464 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 H3BMH7 237 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 F2RL2O00254 374 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 CXCL11O14625 94 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 GRM6O15303 877 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 TMPRSS11DO60235 418 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 LDB3O75112 727 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 ZNF737O75373 536 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 TNFP01375 233 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 FAM90A15PP0C7V4 464 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 FAM90A14PP0C7W9 464 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 LINC00869P0C866 280 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 IGLC1P0CG04 106 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 HIST1H1TP22492 207 aaPredicted RBP4.17□□□□□ -1.74
SF3B1-207ENST00000468925 NPY1RP25929 384 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 IL3RAP26951 378 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 OR1D2P34982 312 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 GPR6P46095 362 aaPredicted RBP4.17□□□□□ -1.74
SF3B1-207ENST00000468925 SNU13P55769 128 aaKnown RBP4.17□□□□□ -1.74
SF3B1-207ENST00000468925 CCL23P55773 120 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 GNB2P62879 340 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 ARG2P78540 354 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 CCL20P78556 96 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 TMEM267Q0VDI3 215 aaPredicted RBP4.17□□□□□ -1.74
SF3B1-207ENST00000468925 FHL1Q13642 323 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 TMEM187Q14656 261 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 OR8B8Q15620 311 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 CBLN3Q6UW01 205 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 NEGR1Q7Z3B1 354 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 RD3Q7Z3Z2 195 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 WDR5BQ86VZ2 330 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 MEX3DQ86XN8 651 aaKnown RBP4.17□□□□□ -1.74
SF3B1-207ENST00000468925 CALHM1Q8IU99 346 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 OR4N5Q8IXE1 308 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 YAF2Q8IY57 180 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 FAM58AQ8N1B3 248 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 RFLNBQ8N5W9 214 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 TMEM252Q8N6L7 170 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 OR10G8Q8NGN5 311 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 OR13G1Q8NGZ3 307 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 SGMS2Q8NHU3 365 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 MRPL30Q8TCC3 161 aaKnown RBP4.17□□□□□ -1.74
SF3B1-207ENST00000468925 C10orf35Q96D05 121 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 MRAP2Q96G30 205 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 ZNF479Q96JC4 524 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 KCNS1Q96KK3 526 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 RASL10BQ96S79 203 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 GPER1Q99527 375 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 FOXB1Q99853 325 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 NICN1Q9BSH3 213 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 RSG1Q9BU20 258 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 TMEM59Q9BXS4 323 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 PARP12Q9H0J9 701 aaKnown RBP4.17□□□□□ -1.74
SF3B1-207ENST00000468925 S1PR5Q9H228 398 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 SH3BGRL3Q9H299 93 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 SLC39A9Q9NUM3 307 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 NECAP2Q9NVZ3 263 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 CLEC5AQ9NY25 188 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 SPANXCQ9NY87 97 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 TAS2R4Q9NYW5 299 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 KCNIP1Q9NZI2 227 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 ABI3Q9P2A4 366 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 CES1P1Q9UKY3 287 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 MCTS1Q9ULC4 181 aaKnown RBP4.17□□□□□ -1.74
SF3B1-207ENST00000468925 VDAC3Q9Y277 283 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 COA3Q9Y2R0 106 aaPredicted RBP4.17□□□□□ -1.74
SF3B1-207ENST00000468925 MRPS18BQ9Y676 258 aaKnown RBP4.17□□□□□ -1.74
SF3B1-207ENST00000468925 SPACA6W5XKT8 324 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 X6R8D5 127 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 PLXNA2O75051 1894 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 SZT2Q5T011 3432 aa4.17□□□□□ -1.74
SF3B1-207ENST00000468925 CENPVL1A0A0U1RR11 272 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 MDFIC2A0A1B0GVS7 189 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 GLOD5A6NK44 160 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 ZFP92A6NM28 416 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 SLC38A8A6NNN8 435 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 C4orf47A7E2U8 309 aa4.16□□□□□ -1.74
SF3B1-207ENST00000468925 C17orf105B2RV13 164 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms