RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 DERL3Q96Q80 235 aa2.69□□□□□ -1.98
LSM5-209ENST00000468872 CYTH2Q99418 400 aa2.69□□□□□ -1.98
LSM5-209ENST00000468872 CTRCQ99895 268 aa2.69□□□□□ -1.98
LSM5-209ENST00000468872 MRPL20Q9BYC9 149 aaKnown RBP2.69□□□□□ -1.98
LSM5-209ENST00000468872 GOLPH3Q9H4A6 298 aa2.69□□□□□ -1.98
LSM5-209ENST00000468872 UBAP1Q9NZ09 502 aa2.69□□□□□ -1.98
LSM5-209ENST00000468872 IL37Q9NZH6 218 aa2.69□□□□□ -1.98
LSM5-209ENST00000468872 SCML1Q9UN30 329 aa2.69□□□□□ -1.98
LSM5-209ENST00000468872 KLF13Q9Y2Y9 288 aaPredicted RBP2.69□□□□□ -1.98
LSM5-209ENST00000468872 NBASA2RRP1 2371 aa2.68□□□□□ -1.98
LSM5-209ENST00000468872 FANCMQ8IYD8 2048 aa2.68□□□□□ -1.98
LSM5-209ENST00000468872 RTTNQ86VV8 2226 aa2.68□□□□□ -1.98
LSM5-209ENST00000468872 A0A1B0GW15 77 aa2.68□□□□□ -1.98
LSM5-209ENST00000468872 MGAT4DA6NG13 374 aa2.68□□□□□ -1.98
LSM5-209ENST00000468872 TRPC5OSA6NMA1 111 aa2.68□□□□□ -1.98
LSM5-209ENST00000468872 ENSAO43768 121 aaKnown RBP2.68□□□□□ -1.98
LSM5-209ENST00000468872 CD8AP01732 235 aa2.68□□□□□ -1.98
LSM5-209ENST00000468872 SEC11BP0C7V7 166 aa2.68□□□□□ -1.98
LSM5-209ENST00000468872 TGM4P49221 684 aa2.68□□□□□ -1.98
LSM5-209ENST00000468872 GUSBP1Q15486 140 aa2.68□□□□□ -1.98
LSM5-209ENST00000468872 IDNKQ5T6J7 187 aa2.68□□□□□ -1.98
LSM5-209ENST00000468872 FAM104BQ5XKR9 115 aa2.68□□□□□ -1.98
LSM5-209ENST00000468872 KCTD16Q68DU8 428 aa2.68□□□□□ -1.98
LSM5-209ENST00000468872 DAZ4Q86SG3 579 aaKnown RBP2.68□□□□□ -1.98
LSM5-209ENST00000468872 C17orf78Q8N4C9 275 aa2.68□□□□□ -1.98
LSM5-209ENST00000468872 SLC26A10Q8NG04 563 aa2.68□□□□□ -1.98
LSM5-209ENST00000468872 DOK4Q8TEW6 326 aa2.68□□□□□ -1.98
LSM5-209ENST00000468872 RILPQ96NA2 401 aa2.68□□□□□ -1.98
LSM5-209ENST00000468872 CATSPER2Q96P56 530 aa2.68□□□□□ -1.98
LSM5-209ENST00000468872 C1orf50Q9BV19 199 aa2.68□□□□□ -1.98
LSM5-209ENST00000468872 DAZ1Q9NQZ3 744 aaKnown RBP2.68□□□□□ -1.98
LSM5-209ENST00000468872 NXT1Q9UKK6 140 aaKnown RBP2.68□□□□□ -1.98
LSM5-209ENST00000468872 LOC285556D6RIA3 1793 aa2.68□□□□□ -1.98
LSM5-209ENST00000468872 MGAMO43451 1857 aa2.68□□□□□ -1.98
LSM5-209ENST00000468872 RFX7Q2KHR2 1363 aa2.67□□□□□ -1.98
LSM5-209ENST00000468872 IGHV1-46P01743 117 aa2.67□□□□□ -1.98
LSM5-209ENST00000468872 ZNF3P17036 446 aa2.67□□□□□ -1.98
LSM5-209ENST00000468872 PSMB6P28072 239 aa2.67□□□□□ -1.98
LSM5-209ENST00000468872 ATP5G2Q06055 141 aa2.67□□□□□ -1.98
LSM5-209ENST00000468872 MEF2CQ06413 473 aaPredicted RBP2.67□□□□□ -1.98
LSM5-209ENST00000468872 ZBTB6Q15916 424 aa2.67□□□□□ -1.98
LSM5-209ENST00000468872 RESP18Q5W5W9 173 aa2.67□□□□□ -1.98
LSM5-209ENST00000468872 CLEC18BQ6UXF7 455 aa2.67□□□□□ -1.98
LSM5-209ENST00000468872 CYP4Z2PQ8N1L4 340 aa2.67□□□□□ -1.98
LSM5-209ENST00000468872 CDRT4Q8N9R6 151 aa2.67□□□□□ -1.98
LSM5-209ENST00000468872 RTBDNQ9BSG5 229 aaPredicted RBP2.67□□□□□ -1.98
LSM5-209ENST00000468872 ASB7Q9H672 318 aa2.67□□□□□ -1.98
LSM5-209ENST00000468872 WDR55Q9H6Y2 383 aaPredicted RBP2.67□□□□□ -1.98
LSM5-209ENST00000468872 SLC22A14Q9Y267 594 aa2.67□□□□□ -1.98
LSM5-209ENST00000468872 HERC2O95714 4834 aa2.67□□□□□ -1.98
LSM5-209ENST00000468872 DAPK1P53355 1430 aa2.67□□□□□ -1.98
LSM5-209ENST00000468872 MYO3BQ8WXR4 1341 aa2.67□□□□□ -1.98
LSM5-209ENST00000468872 RGPD2P0DJD1 1756 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 URB1O60287 2271 aaKnown RBP2.66□□□□□ -1.98
LSM5-209ENST00000468872 SIP14410 1827 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 ROCK1Q13464 1354 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 IGKV1D-17A0A075B6S4 117 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 RNASEK-C17orf49H0YIS7 233 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 TCAPO15273 167 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 CALUO43852 315 aaPredicted RBP2.66□□□□□ -1.98
LSM5-209ENST00000468872 NIPSNAP2O75323 286 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 OR2A4O95047 310 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 IGKV1-17P01599 117 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 OR5AC1P0C628 307 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 TEAD1P28347 426 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 CRATP43155 626 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 DNASE1L1P49184 302 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 SLC18A1P54219 525 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 TPM4P67936 248 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 PMS2P3Q13401 168 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 CEACAM16Q2WEN9 425 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 FAM131AQ6UXB0 335 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 FAM231DQ6ZW35 169 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 TMEM25Q86YD3 366 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 ZNF555Q8NEP9 628 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 OR7G1Q8NGA0 311 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 ZNF721Q8TF20 911 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 DDI1Q8WTU0 396 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 C8orf76Q96K31 380 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 QKIQ96PU8 341 aaKnown RBP eCLIP2.66□□□□□ -1.98
LSM5-209ENST00000468872 OR2M4Q96R27 311 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 OR2A7Q96R45 310 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 VAT1Q99536 393 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 CIB1Q99828 191 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 COPS4Q9BT78 406 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 ANGPTL4Q9BY76 406 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 API5Q9BZZ5 524 aaKnown RBP2.66□□□□□ -1.98
LSM5-209ENST00000468872 OR2S2Q9NQN1 319 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 ATP6V1DQ9Y5K8 247 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 INSIG2Q9Y5U4 225 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 OTOFQ9HC10 1997 aa2.66□□□□□ -1.98
LSM5-209ENST00000468872 NSD1Q96L73 2696 aaPredicted RBP2.65□□□□□ -1.98
LSM5-209ENST00000468872 ABCC12Q96J65 1359 aa2.65□□□□□ -1.98
LSM5-209ENST00000468872 PRRC2CQ9Y520 2896 aaKnown RBP2.65□□□□□ -1.98
LSM5-209ENST00000468872 OR2AT4A6NND4 320 aa2.65□□□□□ -1.99
LSM5-209ENST00000468872 F8VP50 259 aa2.65□□□□□ -1.99
LSM5-209ENST00000468872 MKRN2OSH3BPM6 223 aa2.65□□□□□ -1.99
LSM5-209ENST00000468872 RLN2P04090 185 aa2.65□□□□□ -1.99
LSM5-209ENST00000468872 TAC1P20366 129 aa2.65□□□□□ -1.99
LSM5-209ENST00000468872 RANBP1P43487 201 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms