RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 IGKV1D-33P01593 117 aa13.59□□□□□ -0.23
SSBP1-207ENST00000468267 IGKV1-33P01594 117 aa13.59□□□□□ -0.23
SSBP1-207ENST00000468267 TMEM11P17152 192 aa13.59□□□□□ -0.23
SSBP1-207ENST00000468267 IL3RAP26951 378 aa13.59□□□□□ -0.23
SSBP1-207ENST00000468267 REG1BP48304 166 aa13.59□□□□□ -0.23
SSBP1-207ENST00000468267 ZNF134P52741 427 aa13.59□□□□□ -0.23
SSBP1-207ENST00000468267 CD83Q01151 205 aa13.59□□□□□ -0.23
SSBP1-207ENST00000468267 UNC119Q13432 240 aa13.59□□□□□ -0.23
SSBP1-207ENST00000468267 EBI3Q14213 229 aa13.59□□□□□ -0.23
SSBP1-207ENST00000468267 HNF4GQ14541 408 aa13.59□□□□□ -0.23
SSBP1-207ENST00000468267 CT45A1Q5HYN5 189 aa13.59□□□□□ -0.23
SSBP1-207ENST00000468267 C9orf152Q5JTZ5 239 aa13.59□□□□□ -0.23
SSBP1-207ENST00000468267 NKAPLQ5M9Q1 402 aa13.59□□□□□ -0.23
SSBP1-207ENST00000468267 ZNF554Q86TJ5 538 aa13.59□□□□□ -0.23
SSBP1-207ENST00000468267 PRR18Q8N4B5 295 aa13.59□□□□□ -0.23
SSBP1-207ENST00000468267 OR6M1Q8NGM8 313 aa13.59□□□□□ -0.23
SSBP1-207ENST00000468267 CT45A3Q8NHU0 189 aa13.59□□□□□ -0.23
SSBP1-207ENST00000468267 SULT4A1Q9BR01 284 aa13.59□□□□□ -0.23
SSBP1-207ENST00000468267 KCNK15Q9H427 330 aa13.59□□□□□ -0.23
SSBP1-207ENST00000468267 KCNIP1Q9NZI2 227 aa13.59□□□□□ -0.23
SSBP1-207ENST00000468267 BLOC1S6Q9UL45 172 aa13.59□□□□□ -0.23
SSBP1-207ENST00000468267 DNAH3Q8TD57 4116 aa13.58□□□□□ -0.23
SSBP1-207ENST00000468267 SLC17A2O00624 439 aa13.58□□□□□ -0.24
SSBP1-207ENST00000468267 ATP6V1G2O95670 118 aa13.58□□□□□ -0.24
SSBP1-207ENST00000468267 FABP5Q01469 135 aa13.58□□□□□ -0.24
SSBP1-207ENST00000468267 TBCEQ15813 527 aaPredicted RBP13.58□□□□□ -0.24
SSBP1-207ENST00000468267 STEAP3Q658P3 488 aa13.58□□□□□ -0.24
SSBP1-207ENST00000468267 C5orf56Q8N8D9 126 aa13.58□□□□□ -0.24
SSBP1-207ENST00000468267 OR10V1Q8NGI7 309 aa13.58□□□□□ -0.24
SSBP1-207ENST00000468267 RTN4IP1Q8WWV3 396 aaPredicted RBP13.58□□□□□ -0.24
SSBP1-207ENST00000468267 NICN1Q9BSH3 213 aa13.58□□□□□ -0.24
SSBP1-207ENST00000468267 FAAP24Q9BTP7 215 aa13.58□□□□□ -0.24
SSBP1-207ENST00000468267 AK6Q9Y3D8 172 aaKnown RBP13.58□□□□□ -0.24
SSBP1-207ENST00000468267 FGF16O43320 207 aa13.57□□□□□ -0.24
SSBP1-207ENST00000468267 ZNF137PP52743 207 aa13.57□□□□□ -0.24
SSBP1-207ENST00000468267 P2RY14Q15391 338 aa13.57□□□□□ -0.24
SSBP1-207ENST00000468267 MORN2Q502X0 79 aa13.57□□□□□ -0.24
SSBP1-207ENST00000468267 PDLIM3Q53GG5 364 aaPredicted RBP13.57□□□□□ -0.24
SSBP1-207ENST00000468267 TCTEX1D4Q5JR98 221 aa13.57□□□□□ -0.24
SSBP1-207ENST00000468267 OR2W3Q7Z3T1 314 aa13.57□□□□□ -0.24
SSBP1-207ENST00000468267 C6orf201Q7Z4U5 140 aa13.57□□□□□ -0.24
SSBP1-207ENST00000468267 C5orf24Q7Z6I8 188 aa13.57□□□□□ -0.24
SSBP1-207ENST00000468267 IZUMO1Q8IYV9 350 aa13.57□□□□□ -0.24
SSBP1-207ENST00000468267 OR4F17Q8NGA8 305 aa13.57□□□□□ -0.24
SSBP1-207ENST00000468267 EAF1Q96JC9 268 aaPredicted RBP13.57□□□□□ -0.24
SSBP1-207ENST00000468267 OR4F4Q96R69 305 aa13.57□□□□□ -0.24
SSBP1-207ENST00000468267 PLGRKTQ9HBL7 147 aa13.57□□□□□ -0.24
SSBP1-207ENST00000468267 ACOT13Q9NPJ3 140 aa13.57□□□□□ -0.24
SSBP1-207ENST00000468267 OR2S2Q9NQN1 319 aa13.57□□□□□ -0.24
SSBP1-207ENST00000468267 LRRC42Q9Y546 428 aa13.57□□□□□ -0.24
SSBP1-207ENST00000468267 A0A0A6YYD4 124 aa13.56□□□□□ -0.24
SSBP1-207ENST00000468267 IGHV3-72A0A0B4J1Y9 119 aa13.56□□□□□ -0.24
SSBP1-207ENST00000468267 ARSBP15848 533 aa13.56□□□□□ -0.24
SSBP1-207ENST00000468267 CALRP27797 417 aaKnown RBP13.56□□□□□ -0.24
SSBP1-207ENST00000468267 CD1BP29016 333 aa13.56□□□□□ -0.24
SSBP1-207ENST00000468267 BLVRBP30043 206 aaPredicted RBP13.56□□□□□ -0.24
SSBP1-207ENST00000468267 HTD2P86397 168 aa13.56□□□□□ -0.24
SSBP1-207ENST00000468267 ZNF367Q7RTV3 350 aa13.56□□□□□ -0.24
SSBP1-207ENST00000468267 FAM89BQ8N5H3 189 aa13.56□□□□□ -0.24
SSBP1-207ENST00000468267 Q8N6K4 173 aa13.56□□□□□ -0.24
SSBP1-207ENST00000468267 OR2T10Q8NGZ9 312 aa13.56□□□□□ -0.24
SSBP1-207ENST00000468267 R3HDM4Q96D70 268 aa13.56□□□□□ -0.24
SSBP1-207ENST00000468267 LPAR5Q9H1C0 372 aa13.56□□□□□ -0.24
SSBP1-207ENST00000468267 TXNL1O43396 289 aa13.55□□□□□ -0.24
SSBP1-207ENST00000468267 NAPSAO96009 420 aa13.55□□□□□ -0.24
SSBP1-207ENST00000468267 GNMTQ14749 295 aa13.55□□□□□ -0.24
SSBP1-207ENST00000468267 RAB11BQ15907 218 aa13.55□□□□□ -0.24
SSBP1-207ENST00000468267 SSX1Q16384 188 aa13.55□□□□□ -0.24
SSBP1-207ENST00000468267 C10orf99Q6UWK7 81 aa13.55□□□□□ -0.24
SSBP1-207ENST00000468267 C1QL4Q86Z23 238 aa13.55□□□□□ -0.24
SSBP1-207ENST00000468267 TGIF2LXQ8IUE1 241 aa13.55□□□□□ -0.24
SSBP1-207ENST00000468267 OR52L2PQ8NGH6 319 aa13.55□□□□□ -0.24
SSBP1-207ENST00000468267 URM1Q9BTM9 101 aaKnown RBP13.55□□□□□ -0.24
SSBP1-207ENST00000468267 PLEKHJ1Q9NW61 149 aa13.55□□□□□ -0.24
SSBP1-207ENST00000468267 JPT1Q9UK76 154 aa13.55□□□□□ -0.24
SSBP1-207ENST00000468267 TCRBV4S1A1TA0A5B7 111 aa13.54□□□□□ -0.24
SSBP1-207ENST00000468267 SOCS1O15524 211 aa13.54□□□□□ -0.24
SSBP1-207ENST00000468267 PPP1CCP36873 323 aaKnown RBP13.54□□□□□ -0.24
SSBP1-207ENST00000468267 PSMD7P51665 324 aa13.54□□□□□ -0.24
SSBP1-207ENST00000468267 HMGN3Q15651 99 aa13.54□□□□□ -0.24
SSBP1-207ENST00000468267 LY6G6FQ5SQ64 297 aa13.54□□□□□ -0.24
SSBP1-207ENST00000468267 ZNF880Q6PDB4 577 aa13.54□□□□□ -0.24
SSBP1-207ENST00000468267 OR4X2Q8NGF9 303 aa13.54□□□□□ -0.24
SSBP1-207ENST00000468267 GALMQ96C23 342 aa13.54□□□□□ -0.24
SSBP1-207ENST00000468267 PLSCR3Q9NRY6 295 aa13.54□□□□□ -0.24
SSBP1-207ENST00000468267 TSSC4Q9Y5U2 329 aaPredicted RBP13.54□□□□□ -0.24
SSBP1-207ENST00000468267 V9GY05 133 aa13.54□□□□□ -0.24
SSBP1-207ENST00000468267 A0A1W2PRX2 142 aa13.53□□□□□ -0.24
SSBP1-207ENST00000468267 NCBP2LA6PVI3 153 aaKnown RBP13.53□□□□□ -0.24
SSBP1-207ENST00000468267 ZNF736B4DX44 427 aaPredicted RBP13.53□□□□□ -0.24
SSBP1-207ENST00000468267 G3V4G9 280 aa13.53□□□□□ -0.24
SSBP1-207ENST00000468267 LANCL1O43813 399 aa13.53□□□□□ -0.24
SSBP1-207ENST00000468267 YPEL1O60688 119 aa13.53□□□□□ -0.24
SSBP1-207ENST00000468267 MRPS14O60783 128 aaKnown RBP13.53□□□□□ -0.24
SSBP1-207ENST00000468267 RGS11O94810 467 aa13.53□□□□□ -0.24
SSBP1-207ENST00000468267 MOSP00540 346 aa13.53□□□□□ -0.24
SSBP1-207ENST00000468267 IGHG2P01859 326 aa13.53□□□□□ -0.24
SSBP1-207ENST00000468267 RANBP1P43487 201 aa13.53□□□□□ -0.24
SSBP1-207ENST00000468267 GABARAPL2P60520 117 aa13.53□□□□□ -0.24
SSBP1-207ENST00000468267 Q6ZPA2 131 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms