RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 IGKV1D-33P01593 117 aa2.32□□□□□ -2.04
SMC4-208ENST00000467468 IGKV1-33P01594 117 aa2.32□□□□□ -2.04
SMC4-208ENST00000467468 PFN1P07737 140 aaKnown RBP2.32□□□□□ -2.04
SMC4-208ENST00000467468 PSMB3P49720 205 aa2.32□□□□□ -2.04
SMC4-208ENST00000467468 LY6EQ16553 131 aa2.32□□□□□ -2.04
SMC4-208ENST00000467468 KRTAP13-2Q52LG2 175 aa2.32□□□□□ -2.04
SMC4-208ENST00000467468 SPIN4Q56A73 249 aa2.32□□□□□ -2.04
SMC4-208ENST00000467468 MESTQ5EB52 335 aa2.32□□□□□ -2.04
SMC4-208ENST00000467468 TNFAIP8L2Q6P589 184 aaPredicted RBP2.32□□□□□ -2.04
SMC4-208ENST00000467468 LRRN1Q6UXK5 716 aa2.32□□□□□ -2.04
SMC4-208ENST00000467468 PP632Q6XCG6 107 aa2.32□□□□□ -2.04
SMC4-208ENST00000467468 DOLPP1Q86YN1 238 aa2.32□□□□□ -2.04
SMC4-208ENST00000467468 C10orf67Q8IYJ2 551 aa2.32□□□□□ -2.04
SMC4-208ENST00000467468 RNF182Q8N6D2 247 aa2.32□□□□□ -2.04
SMC4-208ENST00000467468 TMEM75Q8N9X5 138 aa2.32□□□□□ -2.04
SMC4-208ENST00000467468 ERMNQ8TAM6 284 aa2.32□□□□□ -2.04
SMC4-208ENST00000467468 HAVCR2Q8TDQ0 301 aa2.32□□□□□ -2.04
SMC4-208ENST00000467468 PTH2Q96A98 100 aa2.32□□□□□ -2.04
SMC4-208ENST00000467468 TLCD1Q96CP7 247 aa2.32□□□□□ -2.04
SMC4-208ENST00000467468 OR2V2Q96R30 315 aa2.32□□□□□ -2.04
SMC4-208ENST00000467468 OR7D2Q96RA2 312 aa2.32□□□□□ -2.04
SMC4-208ENST00000467468 RTBDNQ9BSG5 229 aaPredicted RBP2.32□□□□□ -2.04
SMC4-208ENST00000467468 GNB1LQ9BYB4 327 aa2.32□□□□□ -2.04
SMC4-208ENST00000467468 DERL2Q9GZP9 239 aa2.32□□□□□ -2.04
SMC4-208ENST00000467468 OR51B6Q9H340 312 aa2.32□□□□□ -2.04
SMC4-208ENST00000467468 MAP1LC3AQ9H492 121 aa2.32□□□□□ -2.04
SMC4-208ENST00000467468 TRIM45Q9H8W5 580 aaPredicted RBP2.32□□□□□ -2.04
SMC4-208ENST00000467468 DHCR7Q9UBM7 475 aaKnown RBP2.32□□□□□ -2.04
SMC4-208ENST00000467468 MARCOQ9UEW3 520 aaPredicted RBP2.32□□□□□ -2.04
SMC4-208ENST00000467468 ZNF230Q9UIE0 474 aaPredicted RBP2.32□□□□□ -2.04
SMC4-208ENST00000467468 C9orf84Q5VXU9 1444 aa2.32□□□□□ -2.04
SMC4-208ENST00000467468 PLB1Q6P1J6 1458 aa2.32□□□□□ -2.04
SMC4-208ENST00000467468 B4DEV8 164 aa2.31□□□□□ -2.04
SMC4-208ENST00000467468 H3BQ85 93 aa2.31□□□□□ -2.04
SMC4-208ENST00000467468 COPEO14579 308 aa2.31□□□□□ -2.04
SMC4-208ENST00000467468 ISG15P05161 165 aa2.31□□□□□ -2.04
SMC4-208ENST00000467468 ATP5G1P05496 136 aa2.31□□□□□ -2.04
SMC4-208ENST00000467468 SERPINA6P08185 405 aa2.31□□□□□ -2.04
SMC4-208ENST00000467468 FBP1P09467 338 aa2.31□□□□□ -2.04
SMC4-208ENST00000467468 NQO1P15559 274 aaKnown RBP2.31□□□□□ -2.04
SMC4-208ENST00000467468 NKX2-5P52952 324 aaPredicted RBP2.31□□□□□ -2.04
SMC4-208ENST00000467468 GABARAPL2P60520 117 aa2.31□□□□□ -2.04
SMC4-208ENST00000467468 IHHQ14623 411 aa2.31□□□□□ -2.04
SMC4-208ENST00000467468 IMPG1Q17R60 797 aa2.31□□□□□ -2.04
SMC4-208ENST00000467468 TMEM136Q6ZRR5 245 aa2.31□□□□□ -2.04
SMC4-208ENST00000467468 ADM2Q7Z4H4 148 aa2.31□□□□□ -2.04
SMC4-208ENST00000467468 NIT1Q86X76 327 aa2.31□□□□□ -2.04
SMC4-208ENST00000467468 RMI2Q96E14 147 aa2.31□□□□□ -2.04
SMC4-208ENST00000467468 ACY3Q96HD9 319 aa2.31□□□□□ -2.04
SMC4-208ENST00000467468 TIPINQ9BVW5 301 aa2.31□□□□□ -2.04
SMC4-208ENST00000467468 C11orf49Q9H6J7 331 aa2.31□□□□□ -2.04
SMC4-208ENST00000467468 ZNF286AQ9HBT8 521 aa2.31□□□□□ -2.04
SMC4-208ENST00000467468 NPATQ14207 1427 aa2.31□□□□□ -2.04
SMC4-208ENST00000467468 SMIM23A6NLE4 172 aa2.3□□□□□ -2.04
SMC4-208ENST00000467468 H3BMM0 161 aa2.3□□□□□ -2.04
SMC4-208ENST00000467468 TGOLN2O43493 480 aa2.3□□□□□ -2.04
SMC4-208ENST00000467468 IFNA5P01569 189 aa2.3□□□□□ -2.04
SMC4-208ENST00000467468 IGHV3-53P01767 116 aa2.3□□□□□ -2.04
SMC4-208ENST00000467468 HLA-DRAP01903 254 aa2.3□□□□□ -2.04
SMC4-208ENST00000467468 GYPCP04921 128 aa2.3□□□□□ -2.04
SMC4-208ENST00000467468 CRYBA1P05813 215 aa2.3□□□□□ -2.04
SMC4-208ENST00000467468 GUSBP08236 651 aa2.3□□□□□ -2.04
SMC4-208ENST00000467468 INAFM2P0DMQ5 153 aa2.3□□□□□ -2.04
SMC4-208ENST00000467468 CXCL2P19875 107 aa2.3□□□□□ -2.04
SMC4-208ENST00000467468 CXCL3P19876 107 aa2.3□□□□□ -2.04
SMC4-208ENST00000467468 CXCR4P61073 352 aa2.3□□□□□ -2.04
SMC4-208ENST00000467468 HPCAP84074 193 aa2.3□□□□□ -2.04
SMC4-208ENST00000467468 PPP1R1AQ13522 171 aa2.3□□□□□ -2.04
SMC4-208ENST00000467468 BCL2A1Q16548 175 aa2.3□□□□□ -2.04
SMC4-208ENST00000467468 LPCAT4Q643R3 524 aa2.3□□□□□ -2.04
SMC4-208ENST00000467468 LCN8Q6JVE9 175 aa2.3□□□□□ -2.04
SMC4-208ENST00000467468 CD200R1LQ6Q8B3 271 aa2.3□□□□□ -2.04
SMC4-208ENST00000467468 Q6ZQT7 251 aa2.3□□□□□ -2.04
SMC4-208ENST00000467468 NATD1Q8N6N6 113 aa2.3□□□□□ -2.04
SMC4-208ENST00000467468 BPIFB6Q8NFQ5 453 aa2.3□□□□□ -2.04
SMC4-208ENST00000467468 RAB8BQ92930 207 aa2.3□□□□□ -2.04
SMC4-208ENST00000467468 UBE2WQ96B02 151 aa2.3□□□□□ -2.04
SMC4-208ENST00000467468 TESCQ96BS2 214 aa2.3□□□□□ -2.04
SMC4-208ENST00000467468 EBNA1BP2Q99848 306 aaKnown RBP2.3□□□□□ -2.04
SMC4-208ENST00000467468 BCL2L14Q9BZR8 327 aa2.3□□□□□ -2.04
SMC4-208ENST00000467468 EIF5A2Q9GZV4 153 aaKnown RBP2.3□□□□□ -2.04
SMC4-208ENST00000467468 HRASLSQ9HDD0 168 aa2.3□□□□□ -2.04
SMC4-208ENST00000467468 RPUSD1Q9UJJ7 312 aaKnown RBP2.3□□□□□ -2.04
SMC4-208ENST00000467468 TICRRQ7Z2Z1 1910 aa2.3□□□□□ -2.04
SMC4-208ENST00000467468 TRIP11Q15643 1979 aa2.29□□□□□ -2.04
SMC4-208ENST00000467468 SCN4AP35499 1836 aa2.29□□□□□ -2.04
SMC4-208ENST00000467468 BRD4O60885 1362 aaPredicted RBP2.29□□□□□ -2.04
SMC4-208ENST00000467468 IGKV1-12A0A0C4DH73 117 aa2.29□□□□□ -2.04
SMC4-208ENST00000467468 DENRO43583 198 aaKnown RBP2.29□□□□□ -2.04
SMC4-208ENST00000467468 IGKV1D-12P01611 117 aa2.29□□□□□ -2.04
SMC4-208ENST00000467468 OR13C7P0DN81 318 aa2.29□□□□□ -2.04
SMC4-208ENST00000467468 ZNF14P17017 642 aaPredicted RBP2.29□□□□□ -2.04
SMC4-208ENST00000467468 ORM2P19652 201 aa2.29□□□□□ -2.04
SMC4-208ENST00000467468 RPL12P30050 165 aaKnown RBP2.29□□□□□ -2.04
SMC4-208ENST00000467468 AP2S1P53680 142 aaPredicted RBP2.29□□□□□ -2.04
SMC4-208ENST00000467468 BIKQ13323 160 aa2.29□□□□□ -2.04
SMC4-208ENST00000467468 EBPQ15125 230 aaKnown RBP2.29□□□□□ -2.04
SMC4-208ENST00000467468 MAPK14Q16539 360 aa2.29□□□□□ -2.04
SMC4-208ENST00000467468 IGFL1Q6UW32 110 aa2.29□□□□□ -2.04
SMC4-208ENST00000467468 LYZL2Q7Z4W2 148 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms