RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 SPERTQ8NA61 448 aa1.57□□□□□ -2.16
LRCH3-211ENST00000466054 OR5K1Q8NHB7 308 aa1.57□□□□□ -2.16
LRCH3-211ENST00000466054 ANGPTL6Q8NI99 470 aa1.57□□□□□ -2.16
LRCH3-211ENST00000466054 CYTH2Q99418 400 aa1.57□□□□□ -2.16
LRCH3-211ENST00000466054 SLC19A3Q9BZV2 496 aa1.57□□□□□ -2.16
LRCH3-211ENST00000466054 CXCL16Q9H2A7 254 aa1.57□□□□□ -2.16
LRCH3-211ENST00000466054 SMDT1Q9H4I9 107 aa1.57□□□□□ -2.16
LRCH3-211ENST00000466054 FBXL3Q9UKT7 428 aa1.57□□□□□ -2.16
LRCH3-211ENST00000466054 OR51B4Q9Y5P0 310 aa1.57□□□□□ -2.16
LRCH3-211ENST00000466054 DNMT1P26358 1616 aaKnown RBP1.57□□□□□ -2.16
LRCH3-211ENST00000466054 ICE1Q9Y2F5 2266 aa1.57□□□□□ -2.16
LRCH3-211ENST00000466054 STRCP1A6NGW2 1772 aa1.57□□□□□ -2.16
LRCH3-211ENST00000466054 CRB1P82279 1406 aa1.57□□□□□ -2.16
LRCH3-211ENST00000466054 SLIT2O94813 1529 aa1.56□□□□□ -2.16
LRCH3-211ENST00000466054 FBN3Q75N90 2809 aa1.56□□□□□ -2.16
LRCH3-211ENST00000466054 YKT6O15498 198 aa1.56□□□□□ -2.16
LRCH3-211ENST00000466054 CRYGDP07320 174 aa1.56□□□□□ -2.16
LRCH3-211ENST00000466054 LIMS3P0CW19 117 aa1.56□□□□□ -2.16
LRCH3-211ENST00000466054 LIMS4P0CW20 117 aa1.56□□□□□ -2.16
LRCH3-211ENST00000466054 ZNF7P17097 686 aaPredicted RBP1.56□□□□□ -2.16
LRCH3-211ENST00000466054 GADD45AP24522 165 aa1.56□□□□□ -2.16
LRCH3-211ENST00000466054 ZNF117Q03924 483 aa1.56□□□□□ -2.16
LRCH3-211ENST00000466054 EXOC3L4Q17RC7 722 aa1.56□□□□□ -2.16
LRCH3-211ENST00000466054 KRTAP13-4Q3LI77 160 aa1.56□□□□□ -2.16
LRCH3-211ENST00000466054 RBM48Q5RL73 367 aaKnown RBP1.56□□□□□ -2.16
LRCH3-211ENST00000466054 C17orf78Q8N4C9 275 aa1.56□□□□□ -2.16
LRCH3-211ENST00000466054 ERMNQ8TAM6 284 aa1.56□□□□□ -2.16
LRCH3-211ENST00000466054 SUN5Q8TC36 379 aa1.56□□□□□ -2.16
LRCH3-211ENST00000466054 TXNDC17Q9BRA2 123 aa1.56□□□□□ -2.16
LRCH3-211ENST00000466054 C1QTNF6Q9BXI9 259 aa1.56□□□□□ -2.16
LRCH3-211ENST00000466054 TTTY12Q9BZ98 90 aa1.56□□□□□ -2.16
LRCH3-211ENST00000466054 GTSF1LQ9H1H1 148 aa1.56□□□□□ -2.16
LRCH3-211ENST00000466054 CHMP5Q9NZZ3 219 aa1.56□□□□□ -2.16
LRCH3-211ENST00000466054 PTPRJQ12913 1337 aa1.56□□□□□ -2.16
LRCH3-211ENST00000466054 SYNRGQ9UMZ2 1314 aa1.56□□□□□ -2.16
LRCH3-211ENST00000466054 A0A0J9YX75 114 aa1.55□□□□□ -2.16
LRCH3-211ENST00000466054 ERICH4A6NGS2 130 aa1.55□□□□□ -2.16
LRCH3-211ENST00000466054 SULT1C2O00338 296 aa1.55□□□□□ -2.16
LRCH3-211ENST00000466054 TNFAIP8O95379 198 aa1.55□□□□□ -2.16
LRCH3-211ENST00000466054 MAGEA6P43360 314 aa1.55□□□□□ -2.16
LRCH3-211ENST00000466054 LPAR6P43657 344 aa1.55□□□□□ -2.16
LRCH3-211ENST00000466054 BSPH1Q075Z2 132 aa1.55□□□□□ -2.16
LRCH3-211ENST00000466054 PDK2Q15119 407 aa1.55□□□□□ -2.16
LRCH3-211ENST00000466054 CENPWQ5EE01 88 aa1.55□□□□□ -2.16
LRCH3-211ENST00000466054 TIMM23BQ5SRD1 257 aa1.55□□□□□ -2.16
LRCH3-211ENST00000466054 TTC33Q6PID6 262 aaPredicted RBP1.55□□□□□ -2.16
LRCH3-211ENST00000466054 TAMM41Q96BW9 452 aa1.55□□□□□ -2.16
LRCH3-211ENST00000466054 CHST5Q9GZS9 411 aa1.55□□□□□ -2.16
LRCH3-211ENST00000466054 MAP3K19Q56UN5 1328 aa1.55□□□□□ -2.16
LRCH3-211ENST00000466054 TRPM6Q9BX84 2022 aa1.55□□□□□ -2.16
LRCH3-211ENST00000466054 NUP153P49790 1475 aaKnown RBP1.55□□□□□ -2.16
LRCH3-211ENST00000466054 COL4A2P08572 1712 aa1.54□□□□□ -2.16
LRCH3-211ENST00000466054 A0A1W2PQL4 384 aaPredicted RBP1.54□□□□□ -2.16
LRCH3-211ENST00000466054 K7ERQ8 282 aa1.54□□□□□ -2.16
LRCH3-211ENST00000466054 LIN7AO14910 233 aaPredicted RBP1.54□□□□□ -2.16
LRCH3-211ENST00000466054 SYNGR1O43759 233 aa1.54□□□□□ -2.16
LRCH3-211ENST00000466054 ZNF189O75820 626 aaPredicted RBP1.54□□□□□ -2.16
LRCH3-211ENST00000466054 CDK14O94921 469 aa1.54□□□□□ -2.16
LRCH3-211ENST00000466054 GP1BAP07359 652 aa1.54□□□□□ -2.16
LRCH3-211ENST00000466054 ZNF140P52738 457 aaPredicted RBP1.54□□□□□ -2.16
LRCH3-211ENST00000466054 HADHBP55084 474 aaKnown RBP1.54□□□□□ -2.16
LRCH3-211ENST00000466054 RWDD2BP57060 319 aa1.54□□□□□ -2.16
LRCH3-211ENST00000466054 OR2B6P58173 313 aa1.54□□□□□ -2.16
LRCH3-211ENST00000466054 RAB8AP61006 207 aa1.54□□□□□ -2.16
LRCH3-211ENST00000466054 PDGFRLQ15198 375 aa1.54□□□□□ -2.16
LRCH3-211ENST00000466054 KRTAP21-3Q3LHN1 58 aa1.54□□□□□ -2.16
LRCH3-211ENST00000466054 TCAIMQ8N3R3 496 aa1.54□□□□□ -2.16
LRCH3-211ENST00000466054 C2orf73Q8N5S3 287 aaPredicted RBP1.54□□□□□ -2.16
LRCH3-211ENST00000466054 YIPF7Q8N8F6 280 aa1.54□□□□□ -2.16
LRCH3-211ENST00000466054 ZNRF2Q8NHG8 242 aa1.54□□□□□ -2.16
LRCH3-211ENST00000466054 RNASE11Q8TAA1 199 aaKnown RBP1.54□□□□□ -2.16
LRCH3-211ENST00000466054 CCDC12Q8WUD4 166 aaPredicted RBP1.54□□□□□ -2.16
LRCH3-211ENST00000466054 TMIGD2Q96BF3 282 aa1.54□□□□□ -2.16
LRCH3-211ENST00000466054 FAM210AQ96ND0 272 aa1.54□□□□□ -2.16
LRCH3-211ENST00000466054 UPK3BQ9BT76 320 aa1.54□□□□□ -2.16
LRCH3-211ENST00000466054 UBQLN4Q9NRR5 601 aa1.54□□□□□ -2.16
LRCH3-211ENST00000466054 TXNL4BQ9NX01 149 aaKnown RBP1.54□□□□□ -2.16
LRCH3-211ENST00000466054 ALG5Q9Y673 324 aa1.54□□□□□ -2.16
LRCH3-211ENST00000466054 F5H5K5 113 aa1.53□□□□□ -2.16
LRCH3-211ENST00000466054 TRAPPC3O43617 180 aa1.53□□□□□ -2.16
LRCH3-211ENST00000466054 PSMB3P49720 205 aa1.53□□□□□ -2.16
LRCH3-211ENST00000466054 DYNLL1P63167 89 aaKnown RBP1.53□□□□□ -2.16
LRCH3-211ENST00000466054 SLC35A2P78381 396 aa1.53□□□□□ -2.16
LRCH3-211ENST00000466054 SS18Q15532 418 aa1.53□□□□□ -2.16
LRCH3-211ENST00000466054 FAM229BQ4G0N7 80 aa1.53□□□□□ -2.16
LRCH3-211ENST00000466054 MRPL51Q4U2R6 128 aaKnown RBP1.53□□□□□ -2.16
LRCH3-211ENST00000466054 CCDC121Q6ZUS5 278 aa1.53□□□□□ -2.16
LRCH3-211ENST00000466054 OR51H1Q8NH63 302 aa1.53□□□□□ -2.16
LRCH3-211ENST00000466054 DYNC2LI1Q8TCX1 351 aa1.53□□□□□ -2.16
LRCH3-211ENST00000466054 SORL1Q92673 2214 aa1.53□□□□□ -2.16
LRCH3-211ENST00000466054 TMBIM1Q969X1 311 aa1.53□□□□□ -2.16
LRCH3-211ENST00000466054 TMEM56Q96MV1 263 aa1.53□□□□□ -2.16
LRCH3-211ENST00000466054 MBOAT7Q96N66 472 aa1.53□□□□□ -2.16
LRCH3-211ENST00000466054 ZNF251Q9BRH9 671 aa1.53□□□□□ -2.16
LRCH3-211ENST00000466054 MED18Q9BUE0 208 aa1.53□□□□□ -2.16
LRCH3-211ENST00000466054 OR52A5Q9H2C5 316 aa1.53□□□□□ -2.16
LRCH3-211ENST00000466054 LINC00527Q9UJ94 153 aa1.53□□□□□ -2.16
LRCH3-211ENST00000466054 ADGRB3O60242 1522 aa1.52□□□□□ -2.17
LRCH3-211ENST00000466054 MUC21A0A0G2JKD1 596 aa1.52□□□□□ -2.17
LRCH3-211ENST00000466054 MUC21A0A140T8X8 626 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms