RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 C1orf162Q8NEQ5 155 aaPredicted RBP8.36□□□□□ -1.07
PTPRD-207ENST00000463477 MRPL30Q8TCC3 161 aaKnown RBP8.36□□□□□ -1.07
PTPRD-207ENST00000463477 NINJ1Q92982 152 aa8.36□□□□□ -1.07
PTPRD-207ENST00000463477 CABLES2Q9BTV7 478 aa8.36□□□□□ -1.07
PTPRD-207ENST00000463477 ZC4H2Q9NQZ6 224 aa8.36□□□□□ -1.07
PTPRD-207ENST00000463477 LSM5Q9Y4Y9 91 aaKnown RBP8.36□□□□□ -1.07
PTPRD-207ENST00000463477 CADP27708 2225 aa8.36□□□□□ -1.07
PTPRD-207ENST00000463477 BORCS7-ASMTA0A0B4J1R7 106 aa8.35□□□□□ -1.07
PTPRD-207ENST00000463477 LRP5LA4QPB2 252 aa8.35□□□□□ -1.07
PTPRD-207ENST00000463477 DNASE2O00115 360 aaPredicted RBP8.35□□□□□ -1.07
PTPRD-207ENST00000463477 DEGS1O15121 323 aa8.35□□□□□ -1.07
PTPRD-207ENST00000463477 SYNGR1O43759 233 aa8.35□□□□□ -1.07
PTPRD-207ENST00000463477 PRKACAP17612 351 aa8.35□□□□□ -1.07
PTPRD-207ENST00000463477 TUBG1P23258 451 aa8.35□□□□□ -1.07
PTPRD-207ENST00000463477 F2RL1P55085 397 aa8.35□□□□□ -1.07
PTPRD-207ENST00000463477 PDCD1Q15116 288 aa8.35□□□□□ -1.07
PTPRD-207ENST00000463477 NCMAPQ5T1S8 102 aa8.35□□□□□ -1.07
PTPRD-207ENST00000463477 PXDC1Q5TGL8 231 aa8.35□□□□□ -1.07
PTPRD-207ENST00000463477 HAGHLQ6PII5 290 aaPredicted RBP8.35□□□□□ -1.07
PTPRD-207ENST00000463477 BTNL8Q6UX41 500 aa8.35□□□□□ -1.07
PTPRD-207ENST00000463477 GAPTQ8N292 157 aa8.35□□□□□ -1.07
PTPRD-207ENST00000463477 SLC35G3Q8N808 338 aa8.35□□□□□ -1.07
PTPRD-207ENST00000463477 ZNF565Q8N9K5 539 aa8.35□□□□□ -1.07
PTPRD-207ENST00000463477 SUMF2Q8NBJ7 301 aa8.35□□□□□ -1.07
PTPRD-207ENST00000463477 OR5T2Q8NGG2 359 aa8.35□□□□□ -1.07
PTPRD-207ENST00000463477 OR11L1Q8NGX0 322 aa8.35□□□□□ -1.07
PTPRD-207ENST00000463477 NRGNQ92686 78 aa8.35□□□□□ -1.07
PTPRD-207ENST00000463477 PLPPR2Q96GM1 343 aa8.35□□□□□ -1.07
PTPRD-207ENST00000463477 TP53RKQ96S44 253 aa8.35□□□□□ -1.07
PTPRD-207ENST00000463477 MICU1Q9BPX6 476 aa8.35□□□□□ -1.07
PTPRD-207ENST00000463477 GINS3Q9BRX5 216 aa8.35□□□□□ -1.07
PTPRD-207ENST00000463477 TMEM204Q9BSN7 226 aa8.35□□□□□ -1.07
PTPRD-207ENST00000463477 RTL8AQ9BWD3 113 aa8.35□□□□□ -1.07
PTPRD-207ENST00000463477 SEC11CQ9BY50 192 aa8.35□□□□□ -1.07
PTPRD-207ENST00000463477 NKX6-2Q9C056 277 aaPredicted RBP8.35□□□□□ -1.07
PTPRD-207ENST00000463477 MS4A7Q9GZW8 240 aaPredicted RBP8.35□□□□□ -1.07
PTPRD-207ENST00000463477 ESRP2Q9H6T0 727 aaKnown RBP8.35□□□□□ -1.07
PTPRD-207ENST00000463477 OR2S2Q9NQN1 319 aa8.35□□□□□ -1.07
PTPRD-207ENST00000463477 TUBG2Q9NRH3 451 aa8.35□□□□□ -1.07
PTPRD-207ENST00000463477 POLDIP2Q9Y2S7 368 aa8.35□□□□□ -1.07
PTPRD-207ENST00000463477 SLC25A15Q9Y619 301 aa8.35□□□□□ -1.07
PTPRD-207ENST00000463477 H0Y980 276 aa8.34□□□□□ -1.07
PTPRD-207ENST00000463477 ABCD4O14678 606 aa8.34□□□□□ -1.07
PTPRD-207ENST00000463477 SCTP09683 121 aa8.34□□□□□ -1.07
PTPRD-207ENST00000463477 RAC2P15153 192 aa8.34□□□□□ -1.07
PTPRD-207ENST00000463477 SELEP16581 610 aa8.34□□□□□ -1.07
PTPRD-207ENST00000463477 RAB5CP51148 216 aa8.34□□□□□ -1.07
PTPRD-207ENST00000463477 ERVK11-1P61568 191 aa8.34□□□□□ -1.07
PTPRD-207ENST00000463477 HLA-DRB3P79483 266 aa8.34□□□□□ -1.07
PTPRD-207ENST00000463477 HERPUD1Q15011 391 aa8.34□□□□□ -1.07
PTPRD-207ENST00000463477 Q6P435 159 aa8.34□□□□□ -1.07
PTPRD-207ENST00000463477 ATRAIDQ6UW56 229 aa8.34□□□□□ -1.07
PTPRD-207ENST00000463477 TBC1D26Q86UD7 250 aa8.34□□□□□ -1.07
PTPRD-207ENST00000463477 FOXRED2Q8IWF2 684 aa8.34□□□□□ -1.07
PTPRD-207ENST00000463477 WDR31Q8NA23 367 aa8.34□□□□□ -1.07
PTPRD-207ENST00000463477 DMBX1Q8NFW5 382 aa8.34□□□□□ -1.07
PTPRD-207ENST00000463477 HS3ST6Q96QI5 342 aa8.34□□□□□ -1.07
PTPRD-207ENST00000463477 FAM212BQ9NTI7 297 aaPredicted RBP8.34□□□□□ -1.07
PTPRD-207ENST00000463477 OTOGQ6ZRI0 2925 aa8.34□□□□□ -1.07
PTPRD-207ENST00000463477 ARID1AO14497 2285 aa8.34□□□□□ -1.08
PTPRD-207ENST00000463477 TRAV24A0A0B4J272 114 aa8.34□□□□□ -1.08
PTPRD-207ENST00000463477 IGKV1-6A0A0C4DH72 117 aa8.34□□□□□ -1.08
PTPRD-207ENST00000463477 DPRXA6NFQ7 191 aa8.34□□□□□ -1.08
PTPRD-207ENST00000463477 TMEM210A6NLX4 147 aa8.34□□□□□ -1.08
PTPRD-207ENST00000463477 IQCF6A8MYZ5 107 aa8.34□□□□□ -1.08
PTPRD-207ENST00000463477 SMPD2O60906 423 aa8.34□□□□□ -1.08
PTPRD-207ENST00000463477 ZNF205O95201 554 aa8.34□□□□□ -1.08
PTPRD-207ENST00000463477 SCGB1D2O95969 90 aa8.34□□□□□ -1.08
PTPRD-207ENST00000463477 SPP1P10451 314 aa8.34□□□□□ -1.08
PTPRD-207ENST00000463477 SLC25A6P12236 298 aa8.34□□□□□ -1.08
PTPRD-207ENST00000463477 VDAC1P21796 283 aa8.34□□□□□ -1.08
PTPRD-207ENST00000463477 S100GP29377 79 aa8.34□□□□□ -1.08
PTPRD-207ENST00000463477 LPAR6P43657 344 aa8.34□□□□□ -1.08
PTPRD-207ENST00000463477 UCP2P55851 309 aa8.34□□□□□ -1.08
PTPRD-207ENST00000463477 GNMTQ14749 295 aa8.34□□□□□ -1.08
PTPRD-207ENST00000463477 NMSQ5H8A3 153 aa8.34□□□□□ -1.08
PTPRD-207ENST00000463477 ADAM5Q6NVV9 412 aa8.34□□□□□ -1.08
PTPRD-207ENST00000463477 FAM219AQ8IW50 185 aa8.34□□□□□ -1.08
PTPRD-207ENST00000463477 CMTM1Q8IZ96 169 aa8.34□□□□□ -1.08
PTPRD-207ENST00000463477 H1FOOQ8IZA3 346 aaPredicted RBP8.34□□□□□ -1.08
PTPRD-207ENST00000463477 SELENOHQ8IZQ5 122 aaKnown RBP8.34□□□□□ -1.08
PTPRD-207ENST00000463477 OR52M1Q8NGK5 317 aa8.34□□□□□ -1.08
PTPRD-207ENST00000463477 OR5D13Q8NGL4 314 aa8.34□□□□□ -1.08
PTPRD-207ENST00000463477 MBD6Q96DN6 1003 aa8.34□□□□□ -1.08
PTPRD-207ENST00000463477 CDH20Q9HBT6 801 aa8.34□□□□□ -1.08
PTPRD-207ENST00000463477 OBP2BQ9NPH6 170 aa8.34□□□□□ -1.08
PTPRD-207ENST00000463477 UQCC1Q9NVA1 299 aa8.34□□□□□ -1.08
PTPRD-207ENST00000463477 IL36RNQ9UBH0 155 aa8.34□□□□□ -1.08
PTPRD-207ENST00000463477 ZDHHC8Q9ULC8 765 aa8.34□□□□□ -1.08
PTPRD-207ENST00000463477 RCL1Q9Y2P8 373 aaKnown RBP8.34□□□□□ -1.08
PTPRD-207ENST00000463477 UBE2J1Q9Y385 318 aaPredicted RBP8.34□□□□□ -1.08
PTPRD-207ENST00000463477 TRIM77I1YAP6 450 aa8.33□□□□□ -1.08
PTPRD-207ENST00000463477 LILRA1O75019 489 aa8.33□□□□□ -1.08
PTPRD-207ENST00000463477 FBXO24O75426 580 aa8.33□□□□□ -1.08
PTPRD-207ENST00000463477 MED6O75586 246 aa8.33□□□□□ -1.08
PTPRD-207ENST00000463477 CD5P06127 495 aa8.33□□□□□ -1.08
PTPRD-207ENST00000463477 H2AFB1P0C5Y9 115 aa8.33□□□□□ -1.08
PTPRD-207ENST00000463477 DANCRP0C864 163 aa8.33□□□□□ -1.08
PTPRD-207ENST00000463477 ADCYAP1P18509 176 aa8.33□□□□□ -1.08
PTPRD-207ENST00000463477 RCC1P18754 421 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms