RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 IGHV3-72A0A0B4J1Y9 119 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 A0A1W2PP11 408 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 AP4M1O00189 453 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 LALBAP00709 142 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 OR5H8P0DN80 308 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 CGB3P0DN86 165 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 CGB7P0DN87 165 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 CD1BP29016 333 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 SLC6A1P30531 599 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 RAB25P57735 213 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 LOXL3P58215 753 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 SPHARQ15513 63 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 BEAN1Q3B7T3 259 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 ACSM3Q53FZ2 586 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 HSD17B12Q53GQ0 312 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 DEFB121Q5J5C9 76 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 CXorf66Q5JRM2 361 aaPredicted RBP7.06□□□□□ -1.28
LDB1-203ENST00000461873 GPR107Q5VW38 600 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 TEX38Q6PEX7 206 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 CEACAM19Q7Z692 300 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 ZNF329Q86UD4 541 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 LINC00311Q8N616 119 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 C5orf56Q8N8D9 126 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 C8orf31Q8N9H6 132 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 OR8H1Q8NGG4 311 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 OR10V1Q8NGI7 309 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 UBALD1Q8TB05 177 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 FAM46BQ96A09 425 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 PGLYRP3Q96LB9 341 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 DERL3Q96Q80 235 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 URM1Q9BTM9 101 aaKnown RBP7.06□□□□□ -1.28
LDB1-203ENST00000461873 TMEM59Q9BXS4 323 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 NAA50Q9GZZ1 169 aaKnown RBP7.06□□□□□ -1.28
LDB1-203ENST00000461873 LINC00574Q9H8X3 128 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 PLGRKTQ9HBL7 147 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 PLEKHJ1Q9NW61 149 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 KIAA1456Q9P272 454 aa7.06□□□□□ -1.28
LDB1-203ENST00000461873 TRBV5-7A0A0A0MS05 114 aa7.05□□□□□ -1.28
LDB1-203ENST00000461873 A0A1W2PPI3 338 aa7.05□□□□□ -1.28
LDB1-203ENST00000461873 CCDC160A6NGH7 325 aa7.05□□□□□ -1.28
LDB1-203ENST00000461873 A6NHS1 94 aa7.05□□□□□ -1.28
LDB1-203ENST00000461873 FAM90A9PA6NNJ1 464 aa7.05□□□□□ -1.28
LDB1-203ENST00000461873 PDCD6O75340 191 aa7.05□□□□□ -1.28
LDB1-203ENST00000461873 ARL6IP5O75915 188 aa7.05□□□□□ -1.28
LDB1-203ENST00000461873 HBZP02008 142 aa7.05□□□□□ -1.28
LDB1-203ENST00000461873 IGLL1P15814 213 aa7.05□□□□□ -1.28
LDB1-203ENST00000461873 SOX6P35712 828 aa7.05□□□□□ -1.28
LDB1-203ENST00000461873 DCTN2Q13561 401 aaKnown RBP7.05□□□□□ -1.28
LDB1-203ENST00000461873 TRAM1Q15629 374 aa7.05□□□□□ -1.28
LDB1-203ENST00000461873 PNLIPRP3Q17RR3 467 aa7.05□□□□□ -1.28
LDB1-203ENST00000461873 FBLN7Q53RD9 439 aa7.05□□□□□ -1.28
LDB1-203ENST00000461873 STEAP3Q658P3 488 aa7.05□□□□□ -1.28
LDB1-203ENST00000461873 TMEM65Q6PI78 240 aa7.05□□□□□ -1.28
LDB1-203ENST00000461873 GPR141Q7Z602 305 aa7.05□□□□□ -1.28
LDB1-203ENST00000461873 KLHL30-AS1Q8NEE0 82 aa7.05□□□□□ -1.28
LDB1-203ENST00000461873 OR2AK2Q8NG84 335 aa7.05□□□□□ -1.28
LDB1-203ENST00000461873 KCNG3Q8TAE7 436 aa7.05□□□□□ -1.28
LDB1-203ENST00000461873 RTN4IP1Q8WWV3 396 aaPredicted RBP7.05□□□□□ -1.28
LDB1-203ENST00000461873 IL1F10Q8WWZ1 152 aa7.05□□□□□ -1.28
LDB1-203ENST00000461873 PHF21AQ96BD5 680 aa7.05□□□□□ -1.28
LDB1-203ENST00000461873 EAF1Q96JC9 268 aaPredicted RBP7.05□□□□□ -1.28
LDB1-203ENST00000461873 MGLLQ99685 303 aa7.05□□□□□ -1.28
LDB1-203ENST00000461873 ZNF251Q9BRH9 671 aa7.05□□□□□ -1.28
LDB1-203ENST00000461873 TAF9BQ9HBM6 251 aa7.05□□□□□ -1.28
LDB1-203ENST00000461873 VCX3AQ9NNX9 186 aa7.05□□□□□ -1.28
LDB1-203ENST00000461873 LIN7CQ9NUP9 197 aaKnown RBP7.05□□□□□ -1.28
LDB1-203ENST00000461873 JPT1Q9UK76 154 aa7.05□□□□□ -1.28
LDB1-203ENST00000461873 LSM2Q9Y333 95 aaKnown RBP7.05□□□□□ -1.28
LDB1-203ENST00000461873 C12orf77C9JDV5 145 aa7.04□□□□□ -1.28
LDB1-203ENST00000461873 C15orf65H3BRN8 121 aa7.04□□□□□ -1.28
LDB1-203ENST00000461873 HSPA12AO43301 675 aa7.04□□□□□ -1.28
LDB1-203ENST00000461873 MRPS14O60783 128 aaKnown RBP7.04□□□□□ -1.28
LDB1-203ENST00000461873 BPNT1O95861 308 aa7.04□□□□□ -1.28
LDB1-203ENST00000461873 PRB2P02812 416 aaPredicted RBP7.04□□□□□ -1.28
LDB1-203ENST00000461873 SRMP19623 302 aa7.04□□□□□ -1.28
LDB1-203ENST00000461873 PSMA1P25786 263 aaKnown RBP7.04□□□□□ -1.28
LDB1-203ENST00000461873 HTR2CP28335 458 aa7.04□□□□□ -1.28
LDB1-203ENST00000461873 PSMD7P51665 324 aa7.04□□□□□ -1.28
LDB1-203ENST00000461873 RPS11P62280 158 aaKnown RBP eCLIP7.04□□□□□ -1.28
LDB1-203ENST00000461873 LSM3P62310 102 aaKnown RBP7.04□□□□□ -1.28
LDB1-203ENST00000461873 DIAPH2-AS1Q14236 149 aa7.04□□□□□ -1.28
LDB1-203ENST00000461873 PLGLAQ15195 96 aa7.04□□□□□ -1.28
LDB1-203ENST00000461873 MMDQ15546 238 aa7.04□□□□□ -1.28
LDB1-203ENST00000461873 TBCEQ15813 527 aaPredicted RBP7.04□□□□□ -1.28
LDB1-203ENST00000461873 UBE2UQ5VVX9 321 aa7.04□□□□□ -1.28
LDB1-203ENST00000461873 FOXB2Q5VYV0 432 aa7.04□□□□□ -1.28
LDB1-203ENST00000461873 SLC25A48Q6ZT89 311 aaKnown RBP7.04□□□□□ -1.28
LDB1-203ENST00000461873 ZNF554Q86TJ5 538 aa7.04□□□□□ -1.28
LDB1-203ENST00000461873 CLVS1Q8IUQ0 354 aaPredicted RBP7.04□□□□□ -1.28
LDB1-203ENST00000461873 IZUMO1Q8IYV9 350 aa7.04□□□□□ -1.28
LDB1-203ENST00000461873 STPG2Q8N412 459 aa7.04□□□□□ -1.28
LDB1-203ENST00000461873 ZNF485Q8NCK3 441 aa7.04□□□□□ -1.28
LDB1-203ENST00000461873 PHYHIPQ92561 330 aa7.04□□□□□ -1.28
LDB1-203ENST00000461873 NOL4LQ96MY1 436 aaPredicted RBP7.04□□□□□ -1.28
LDB1-203ENST00000461873 S1PR3Q99500 378 aa7.04□□□□□ -1.28
LDB1-203ENST00000461873 ABHD14AQ9BUJ0 271 aa7.04□□□□□ -1.28
LDB1-203ENST00000461873 RIMS4Q9H426 269 aaPredicted RBP7.04□□□□□ -1.28
LDB1-203ENST00000461873 RCC2Q9P258 522 aaKnown RBP7.04□□□□□ -1.28
LDB1-203ENST00000461873 LINC00527Q9UJ94 153 aa7.04□□□□□ -1.28
LDB1-203ENST00000461873 MGAT4AQ9UM21 535 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms