RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 TMEM138Q9NPI0 162 aa9.22□□□□□ -0.93
APTX-209ENST00000460940 KANTRA0A1W2PQU2 76 aa9.21□□□□□ -0.93
APTX-209ENST00000460940 OR2AT4A6NND4 320 aa9.21□□□□□ -0.93
APTX-209ENST00000460940 J3QLI3 93 aa9.21□□□□□ -0.93
APTX-209ENST00000460940 TMPRSS2O15393 492 aa9.21□□□□□ -0.93
APTX-209ENST00000460940 RBBP9O75884 186 aa9.21□□□□□ -0.93
APTX-209ENST00000460940 KNG1P01042 644 aa9.21□□□□□ -0.93
APTX-209ENST00000460940 IGFBP3P17936 291 aaPredicted RBP9.21□□□□□ -0.93
APTX-209ENST00000460940 RCC1P18754 421 aaPredicted RBP9.21□□□□□ -0.93
APTX-209ENST00000460940 ANXA7P20073 488 aaKnown RBP9.21□□□□□ -0.93
APTX-209ENST00000460940 HNF1AP20823 631 aa9.21□□□□□ -0.93
APTX-209ENST00000460940 BDKRB2P30411 391 aa9.21□□□□□ -0.93
APTX-209ENST00000460940 NPBWR1P48145 328 aa9.21□□□□□ -0.93
APTX-209ENST00000460940 TAS2R60P59551 318 aa9.21□□□□□ -0.93
APTX-209ENST00000460940 SPCS3P61009 180 aa9.21□□□□□ -0.93
APTX-209ENST00000460940 LCN2P80188 198 aa9.21□□□□□ -0.93
APTX-209ENST00000460940 KISS1Q15726 138 aa9.21□□□□□ -0.93
APTX-209ENST00000460940 WDR25Q64LD2 544 aaPredicted RBP9.21□□□□□ -0.93
APTX-209ENST00000460940 LYPD2Q6UXB3 125 aa9.21□□□□□ -0.93
APTX-209ENST00000460940 CEACAM19Q7Z692 300 aa9.21□□□□□ -0.93
APTX-209ENST00000460940 TEX29Q8N6K0 151 aa9.21□□□□□ -0.93
APTX-209ENST00000460940 ARL11Q969Q4 196 aa9.21□□□□□ -0.93
APTX-209ENST00000460940 SMCO4Q9NRQ5 59 aa9.21□□□□□ -0.93
APTX-209ENST00000460940 CTSZQ9UBR2 303 aa9.21□□□□□ -0.93
APTX-209ENST00000460940 CDC42EP3Q9UKI2 254 aa9.21□□□□□ -0.93
APTX-209ENST00000460940 FOXJ3Q9UPW0 622 aa9.21□□□□□ -0.93
APTX-209ENST00000460940 NF1P21359 2839 aa9.21□□□□□ -0.93
APTX-209ENST00000460940 MALRD1Q5VYJ5 2156 aa9.21□□□□□ -0.93
APTX-209ENST00000460940 TRAPPC2LH3BP13 241 aa9.21□□□□□ -0.94
APTX-209ENST00000460940 GPR37O15354 613 aa9.21□□□□□ -0.94
APTX-209ENST00000460940 SLC31A2O15432 143 aa9.21□□□□□ -0.94
APTX-209ENST00000460940 ZFP36P26651 326 aaKnown RBP9.21□□□□□ -0.94
APTX-209ENST00000460940 IL13RA1P78552 427 aa9.21□□□□□ -0.94
APTX-209ENST00000460940 SRSF4Q08170 494 aaKnown RBP9.21□□□□□ -0.94
APTX-209ENST00000460940 DNLZQ5SXM8 178 aa9.21□□□□□ -0.94
APTX-209ENST00000460940 ZNF841Q6ZN19 808 aa9.21□□□□□ -0.94
APTX-209ENST00000460940 ZNF788Q6ZQV5 615 aa9.21□□□□□ -0.94
APTX-209ENST00000460940 OR51A2Q8NGJ7 313 aa9.21□□□□□ -0.94
APTX-209ENST00000460940 OR1S2Q8NGQ3 325 aa9.21□□□□□ -0.94
APTX-209ENST00000460940 FCAMRQ8WWV6 532 aa9.21□□□□□ -0.94
APTX-209ENST00000460940 SLAMF9Q96A28 289 aa9.21□□□□□ -0.94
APTX-209ENST00000460940 SEH1LQ96EE3 360 aa9.21□□□□□ -0.94
APTX-209ENST00000460940 ZNF488Q96MN9 340 aa9.21□□□□□ -0.94
APTX-209ENST00000460940 CCL13Q99616 98 aa9.21□□□□□ -0.94
APTX-209ENST00000460940 MTCH1Q9NZJ7 389 aa9.21□□□□□ -0.94
APTX-209ENST00000460940 TRAV14DV4A0A0A6YYC5 116 aa9.2□□□□□ -0.94
APTX-209ENST00000460940 INAFM1C9JVW0 142 aa9.2□□□□□ -0.94
APTX-209ENST00000460940 GOSR2O14653 212 aa9.2□□□□□ -0.94
APTX-209ENST00000460940 PHF1O43189 567 aaPredicted RBP9.2□□□□□ -0.94
APTX-209ENST00000460940 VSIG10L2P0DP72 767 aa9.2□□□□□ -0.94
APTX-209ENST00000460940 PSG2P11465 335 aa9.2□□□□□ -0.94
APTX-209ENST00000460940 SLC25A4P12235 298 aa9.2□□□□□ -0.94
APTX-209ENST00000460940 SNRPBP14678 240 aaKnown RBP9.2□□□□□ -0.94
APTX-209ENST00000460940 CR1LQ2VPA4 569 aa9.2□□□□□ -0.94
APTX-209ENST00000460940 ACSM3Q53FZ2 586 aa9.2□□□□□ -0.94
APTX-209ENST00000460940 LBHQ53QV2 105 aaPredicted RBP9.2□□□□□ -0.94
APTX-209ENST00000460940 LRRC10Q5BKY1 277 aa9.2□□□□□ -0.94
APTX-209ENST00000460940 NKAPLQ5M9Q1 402 aa9.2□□□□□ -0.94
APTX-209ENST00000460940 DCAF12L2Q5VW00 463 aa9.2□□□□□ -0.94
APTX-209ENST00000460940 UNQ9370/PRO34162Q6UXP9 181 aa9.2□□□□□ -0.94
APTX-209ENST00000460940 IL34Q6ZMJ4 242 aa9.2□□□□□ -0.94
APTX-209ENST00000460940 PNLDC1Q8NA58 520 aaKnown RBP9.2□□□□□ -0.94
APTX-209ENST00000460940 OR52I2Q8NH67 350 aa9.2□□□□□ -0.94
APTX-209ENST00000460940 PHYHIPQ92561 330 aa9.2□□□□□ -0.94
APTX-209ENST00000460940 SDSLQ96GA7 329 aa9.2□□□□□ -0.94
APTX-209ENST00000460940 GAFA1Q96PS6 74 aa9.2□□□□□ -0.94
APTX-209ENST00000460940 SPACA5Q96QH8 159 aa9.2□□□□□ -0.94
APTX-209ENST00000460940 NIPBLQ6KC79 2804 aaeCLIP9.2□□□□□ -0.94
APTX-209ENST00000460940 IGKV1D-17A0A075B6S4 117 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 DVL1O14640 695 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 NDUFB3O43676 98 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 ENSAO43768 121 aaKnown RBP9.19□□□□□ -0.94
APTX-209ENST00000460940 BPNT1O95861 308 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 IFNA10P01566 189 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 FAUP35544 74 aaKnown RBP9.19□□□□□ -0.94
APTX-209ENST00000460940 FABP9Q0Z7S8 132 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 RBMS2Q15434 407 aaKnown RBP9.19□□□□□ -0.94
APTX-209ENST00000460940 SPIN3Q5JUX0 258 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 CRIP3Q6Q6R5 217 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 BTNL3Q6UXE8 466 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 CMTM4Q8IZR5 234 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 FAM216BQ8N7L0 139 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 OR52N4Q8NGI2 321 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 RNASE11Q8TAA1 199 aaKnown RBP9.19□□□□□ -0.94
APTX-209ENST00000460940 EMG1Q92979 244 aaKnown RBP9.19□□□□□ -0.94
APTX-209ENST00000460940 SLC25A28Q96A46 364 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 GPER1Q99527 375 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 OCSTAMPQ9BR26 566 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 MRI1Q9BV20 369 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 NOX4Q9NPH5 578 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 MMP26Q9NRE1 261 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 CHTOPQ9Y3Y2 248 aaKnown RBP9.19□□□□□ -0.94
APTX-209ENST00000460940 TRAV8-7A0A075B6U6 113 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 LOC105371242A0A075B767 164 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 IGHV2-70DA0A0C4DH43 119 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 RNF222A6NCQ9 220 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 PIN1P1O15428 100 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 SPRY1O43609 319 aaPredicted RBP9.19□□□□□ -0.94
APTX-209ENST00000460940 CRLF1O75462 422 aa9.19□□□□□ -0.94
APTX-209ENST00000460940 TMEM225BP0DP42 221 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms