RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 MGAT4AQ9UM21 535 aa13.93□□□□□ -0.18
NELFCD-201ENST00000460601 MAP1AP78559 2803 aaPredicted RBP13.92□□□□□ -0.18
NELFCD-201ENST00000460601 POLQO75417 2590 aa13.92□□□□□ -0.18
NELFCD-201ENST00000460601 HMX3A6NHT5 357 aa13.92□□□□□ -0.18
NELFCD-201ENST00000460601 POM121CA8CG34 1229 aa13.92□□□□□ -0.18
NELFCD-201ENST00000460601 NDUFB3O43676 98 aa13.92□□□□□ -0.18
NELFCD-201ENST00000460601 ERP29P30040 261 aaKnown RBP13.92□□□□□ -0.18
NELFCD-201ENST00000460601 PIGPP57054 158 aa13.92□□□□□ -0.18
NELFCD-201ENST00000460601 C17orf58Q2M2W7 97 aa13.92□□□□□ -0.18
NELFCD-201ENST00000460601 C2orf68Q2NKX9 166 aa13.92□□□□□ -0.18
NELFCD-201ENST00000460601 ZNF818PQ6ZRF7 136 aa13.92□□□□□ -0.18
NELFCD-201ENST00000460601 FYTTD1Q96QD9 318 aaKnown RBP13.92□□□□□ -0.18
NELFCD-201ENST00000460601 RANGRFQ9HD47 186 aaPredicted RBP13.92□□□□□ -0.18
NELFCD-201ENST00000460601 KAAG1Q9UBP8 84 aa13.92□□□□□ -0.18
NELFCD-201ENST00000460601 OR2W1Q9Y3N9 320 aa13.92□□□□□ -0.18
NELFCD-201ENST00000460601 C9orf170A2RU37 121 aa13.91□□□□□ -0.18
NELFCD-201ENST00000460601 HSD17B6O14756 317 aa13.91□□□□□ -0.18
NELFCD-201ENST00000460601 MMP23AO75900 390 aa13.91□□□□□ -0.18
NELFCD-201ENST00000460601 GOSR1O95249 250 aa13.91□□□□□ -0.18
NELFCD-201ENST00000460601 DIRAS3O95661 229 aa13.91□□□□□ -0.18
NELFCD-201ENST00000460601 IGHV4-39P01824 125 aa13.91□□□□□ -0.18
NELFCD-201ENST00000460601 ZBTB25P24278 435 aa13.91□□□□□ -0.18
NELFCD-201ENST00000460601 EFNA4P52798 201 aa13.91□□□□□ -0.18
NELFCD-201ENST00000460601 RPL31P62899 125 aaKnown RBP13.91□□□□□ -0.18
NELFCD-201ENST00000460601 MRPS11P82912 194 aaKnown RBP13.91□□□□□ -0.18
NELFCD-201ENST00000460601 SURF2Q15527 256 aaPredicted RBP13.91□□□□□ -0.18
NELFCD-201ENST00000460601 SLC9A3R2Q15599 337 aa13.91□□□□□ -0.18
NELFCD-201ENST00000460601 TMEM128Q5BJH2 165 aa13.91□□□□□ -0.18
NELFCD-201ENST00000460601 LRRC10Q5BKY1 277 aa13.91□□□□□ -0.18
NELFCD-201ENST00000460601 HIST2H2BCQ6DN03 193 aa13.91□□□□□ -0.18
NELFCD-201ENST00000460601 LEAP2Q969E1 77 aa13.91□□□□□ -0.18
NELFCD-201ENST00000460601 CCL28Q9NRJ3 127 aa13.91□□□□□ -0.18
NELFCD-201ENST00000460601 SLC2A9Q9NRM0 540 aa13.91□□□□□ -0.18
NELFCD-201ENST00000460601 CALYQ9NYX4 217 aa13.91□□□□□ -0.18
NELFCD-201ENST00000460601 OR6C3Q9NZP0 311 aa13.91□□□□□ -0.18
NELFCD-201ENST00000460601 C14orf166Q9Y224 244 aaKnown RBP13.91□□□□□ -0.18
NELFCD-201ENST00000460601 YLPM1P49750 1951 aaKnown RBP13.91□□□□□ -0.18
NELFCD-201ENST00000460601 TNFSF12O43508 249 aa13.91□□□□□ -0.18
NELFCD-201ENST00000460601 TRAPPC2P0DI81 140 aa13.91□□□□□ -0.18
NELFCD-201ENST00000460601 TRAPPC2BP0DI82 140 aa13.91□□□□□ -0.18
NELFCD-201ENST00000460601 RPS2P15880 293 aaKnown RBP13.91□□□□□ -0.18
NELFCD-201ENST00000460601 CCL3L1P16619 93 aa13.91□□□□□ -0.18
NELFCD-201ENST00000460601 CR1LQ2VPA4 569 aa13.91□□□□□ -0.18
NELFCD-201ENST00000460601 ZNF841Q6ZN19 808 aa13.91□□□□□ -0.18
NELFCD-201ENST00000460601 ZNF431Q8TF32 576 aaPredicted RBP13.91□□□□□ -0.18
NELFCD-201ENST00000460601 ST6GAL2Q96JF0 529 aa13.91□□□□□ -0.18
NELFCD-201ENST00000460601 GPN1Q9HCN4 374 aaPredicted RBP13.91□□□□□ -0.18
NELFCD-201ENST00000460601 PTPN13Q12923 2485 aa13.91□□□□□ -0.18
NELFCD-201ENST00000460601 ARID1AO14497 2285 aa13.9□□□□□ -0.18
NELFCD-201ENST00000460601 MALRD1Q5VYJ5 2156 aa13.9□□□□□ -0.18
NELFCD-201ENST00000460601 TRGV10A0A0A0MS01 117 aa13.9□□□□□ -0.18
NELFCD-201ENST00000460601 NPIPB11E5RHQ5 1161 aa13.9□□□□□ -0.18
NELFCD-201ENST00000460601 SPINT2O43291 252 aa13.9□□□□□ -0.18
NELFCD-201ENST00000460601 OR8U9P0C7N5 309 aa13.9□□□□□ -0.18
NELFCD-201ENST00000460601 CGB3P0DN86 165 aa13.9□□□□□ -0.18
NELFCD-201ENST00000460601 CGB7P0DN87 165 aa13.9□□□□□ -0.18
NELFCD-201ENST00000460601 GZMHP20718 246 aa13.9□□□□□ -0.18
NELFCD-201ENST00000460601 LYG2Q86SG7 212 aa13.9□□□□□ -0.18
NELFCD-201ENST00000460601 OR8U1Q8NH10 309 aa13.9□□□□□ -0.18
NELFCD-201ENST00000460601 GCN1Q92616 2671 aaKnown RBP13.9□□□□□ -0.18
NELFCD-201ENST00000460601 SNRPGP15A8MWD9 76 aa13.9□□□□□ -0.18
NELFCD-201ENST00000460601 IGLV2-14P01704 120 aa13.9□□□□□ -0.18
NELFCD-201ENST00000460601 CTSDP07339 412 aaPredicted RBP13.9□□□□□ -0.18
NELFCD-201ENST00000460601 LOXL3P58215 753 aa13.9□□□□□ -0.18
NELFCD-201ENST00000460601 KRTAP10-9P60411 292 aa13.9□□□□□ -0.18
NELFCD-201ENST00000460601 TMEM200BQ69YZ2 307 aa13.9□□□□□ -0.18
NELFCD-201ENST00000460601 WDR89Q96FK6 387 aaPredicted RBP13.9□□□□□ -0.18
NELFCD-201ENST00000460601 TIMD4Q96H15 378 aa13.9□□□□□ -0.18
NELFCD-201ENST00000460601 DMRTB1Q96MA1 342 aa13.9□□□□□ -0.18
NELFCD-201ENST00000460601 SLC5A7Q9GZV3 580 aa13.9□□□□□ -0.18
NELFCD-201ENST00000460601 RNF150Q9ULK6 438 aa13.9□□□□□ -0.18
NELFCD-201ENST00000460601 ABCA12Q86UK0 2595 aa13.89□□□□□ -0.19
NELFCD-201ENST00000460601 PHF1O43189 567 aaPredicted RBP13.89□□□□□ -0.19
NELFCD-201ENST00000460601 NDUFA2O43678 99 aa13.89□□□□□ -0.19
NELFCD-201ENST00000460601 DHODHQ02127 395 aa13.89□□□□□ -0.19
NELFCD-201ENST00000460601 SP6Q3SY56 376 aa13.89□□□□□ -0.19
NELFCD-201ENST00000460601 ABCA11PQ4W5N1 156 aa13.89□□□□□ -0.19
NELFCD-201ENST00000460601 SLC38A6Q8IZM9 456 aa13.89□□□□□ -0.19
NELFCD-201ENST00000460601 RTN4IP1Q8WWV3 396 aaPredicted RBP13.89□□□□□ -0.19
NELFCD-201ENST00000460601 RAB1CQ92928 201 aa13.89□□□□□ -0.19
NELFCD-201ENST00000460601 SCGB3A2Q96PL1 93 aa13.89□□□□□ -0.19
NELFCD-201ENST00000460601 RSRP1Q9BUV0 290 aa13.89□□□□□ -0.19
NELFCD-201ENST00000460601 DOCK11Q5JSL3 2073 aa13.89□□□□□ -0.19
NELFCD-201ENST00000460601 KBTBD11-OT1A0A1B0GTJ5 212 aa13.88□□□□□ -0.19
NELFCD-201ENST00000460601 SMLR1H3BR10 107 aa13.88□□□□□ -0.19
NELFCD-201ENST00000460601 SIX6O95475 246 aa13.88□□□□□ -0.19
NELFCD-201ENST00000460601 ECI1P42126 302 aa13.88□□□□□ -0.19
NELFCD-201ENST00000460601 ZFP69Q49AA0 526 aa13.88□□□□□ -0.19
NELFCD-201ENST00000460601 PRAMEF5Q5TYX0 476 aa13.88□□□□□ -0.19
NELFCD-201ENST00000460601 CD276Q5ZPR3 534 aa13.88□□□□□ -0.19
NELFCD-201ENST00000460601 FAM185AQ8N0U4 392 aa13.88□□□□□ -0.19
NELFCD-201ENST00000460601 ZFAND1Q8TCF1 268 aa13.88□□□□□ -0.19
NELFCD-201ENST00000460601 NINJ1Q92982 152 aa13.88□□□□□ -0.19
NELFCD-201ENST00000460601 SLA2Q9H6Q3 261 aa13.88□□□□□ -0.19
NELFCD-201ENST00000460601 GNG12Q9UBI6 72 aa13.88□□□□□ -0.19
NELFCD-201ENST00000460601 CLN8Q9UBY8 286 aa13.88□□□□□ -0.19
NELFCD-201ENST00000460601 RBM7Q9Y580 266 aaKnown RBP13.88□□□□□ -0.19
NELFCD-201ENST00000460601 ARHGAP32A7KAX9 2087 aa13.88□□□□□ -0.19
NELFCD-201ENST00000460601 SULT1A3P0DMM9 295 aa13.88□□□□□ -0.19
NELFCD-201ENST00000460601 SULT1A4P0DMN0 295 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms