RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 ARL11Q969Q4 196 aa7.4□□□□□ -1.22
CDC42EP3-204ENST00000457889 GALNT14Q96FL9 552 aa7.4□□□□□ -1.22
CDC42EP3-204ENST00000457889 AKR1E2Q96JD6 320 aa7.4□□□□□ -1.22
CDC42EP3-204ENST00000457889 OR8B2Q96RD0 313 aa7.4□□□□□ -1.22
CDC42EP3-204ENST00000457889 PHB2Q99623 299 aa7.4□□□□□ -1.22
CDC42EP3-204ENST00000457889 CCL19Q99731 98 aa7.4□□□□□ -1.22
CDC42EP3-204ENST00000457889 NEURL2Q9BR09 285 aa7.4□□□□□ -1.22
CDC42EP3-204ENST00000457889 DCAF16Q9NXF7 216 aa7.4□□□□□ -1.22
CDC42EP3-204ENST00000457889 CALYQ9NYX4 217 aa7.4□□□□□ -1.22
CDC42EP3-204ENST00000457889 CLN8Q9UBY8 286 aa7.4□□□□□ -1.22
CDC42EP3-204ENST00000457889 KCNIP3Q9Y2W7 256 aa7.4□□□□□ -1.22
CDC42EP3-204ENST00000457889 HRNRQ86YZ3 2850 aaPredicted RBP7.4□□□□□ -1.23
CDC42EP3-204ENST00000457889 C9orf170A2RU37 121 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 CRYM-AS1A6NIL9 109 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 RNF212BA8MTL3 300 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 NDUFS8O00217 210 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 YPEL1O60688 119 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 CCNKO75909 580 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 ZNF205O95201 554 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 SFT2D2O95562 160 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 CLDN1O95832 211 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 IFNA2P01563 188 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 RBP4P02753 201 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 SULT1A3P0DMM9 295 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 SULT1A4P0DMN0 295 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 PAX1P15863 534 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 NDUFB7P17568 137 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 HLA-GP17693 338 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 NFYAP23511 347 aaPredicted RBP7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 VAMP1P23763 118 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 COL8A2P25067 703 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 SSTR2P30874 369 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 SSTR5P35346 364 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 RAB7AP51149 207 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 HOXA4Q00056 320 aaPredicted RBP7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 PPP1R1AQ13522 171 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 SP5Q6BEB4 398 aaPredicted RBP7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 LIN54Q6MZP7 749 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 TCTE3Q8IZS6 198 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 C12orf45Q8N5I9 185 aaPredicted RBP7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 BVESQ8NE79 360 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 OR10V1Q8NGI7 309 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 COQ8AQ8NI60 647 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 TOMM40LQ969M1 308 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 NEIL1Q96FI4 390 aaPredicted RBP7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 YPEL2Q96QA6 119 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 SEC22CQ9BRL7 303 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 RTBDNQ9BSG5 229 aaPredicted RBP7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 SUCNR1Q9BXA5 334 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 SLC5A7Q9GZV3 580 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 LIME1Q9H400 295 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 OR2S2Q9NQN1 319 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 SLC2A9Q9NRM0 540 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 RDH8Q9NYR8 311 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 ZNF221Q9UK13 617 aa7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 RALYQ9UKM9 306 aaKnown RBP7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 USP9YO00507 2555 aaPredicted RBP7.39□□□□□ -1.23
CDC42EP3-204ENST00000457889 TEX13DA0A0J9YY54 714 aaPredicted RBP7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 DVL1O14640 695 aa7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 PPIHO43447 177 aaKnown RBP7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 SNAPC5O75971 98 aa7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 GIPP09681 153 aaPredicted RBP7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 RPS2P15880 293 aaKnown RBP7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 AKR1C4P17516 323 aa7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 CD34P28906 385 aa7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 RBMXP38159 391 aaKnown RBP7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 CEACAM6P40199 344 aa7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 GPR6P46095 362 aaPredicted RBP7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 PIGPP57054 158 aa7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 FXYD4P59646 89 aa7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 BAMBIQ13145 260 aa7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 HEPN1Q6WQI6 88 aa7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 LDLRAD3Q86YD5 345 aa7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 PRR18Q8N4B5 295 aa7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 TCTEX1D1Q8N7M0 179 aa7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 C8orf31Q8N9H6 132 aa7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 OR2AK2Q8NG84 335 aa7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 OR1L1Q8NH94 360 aa7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 C8orf46Q8TAG6 207 aa7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 SECTM1Q8WVN6 248 aa7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 RTN4IP1Q8WWV3 396 aaPredicted RBP7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 TMEM230Q96A57 120 aa7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 ZNF714Q96N38 554 aa7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 NAA60Q9H7X0 242 aa7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 FAM212BQ9NTI7 297 aaPredicted RBP7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 OR1A1Q9P1Q5 309 aa7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 GNG12Q9UBI6 72 aa7.38□□□□□ -1.23
CDC42EP3-204ENST00000457889 USF3Q68DE3 2245 aa7.37□□□□□ -1.23
CDC42EP3-204ENST00000457889 DSCAML1Q8TD84 2053 aa7.37□□□□□ -1.23
CDC42EP3-204ENST00000457889 hCG_1809904A0A1W2PP81 198 aa7.37□□□□□ -1.23
CDC42EP3-204ENST00000457889 A0A1W2PPE2 198 aa7.37□□□□□ -1.23
CDC42EP3-204ENST00000457889 DUXBA0A1W2PPF3 345 aa7.37□□□□□ -1.23
CDC42EP3-204ENST00000457889 A0A1W2PR64 198 aa7.37□□□□□ -1.23
CDC42EP3-204ENST00000457889 A0A1W2PRV1 198 aa7.37□□□□□ -1.23
CDC42EP3-204ENST00000457889 F5H0A9 414 aaPredicted RBP7.37□□□□□ -1.23
CDC42EP3-204ENST00000457889 MPPED1O15442 326 aa7.37□□□□□ -1.23
CDC42EP3-204ENST00000457889 TFF1P04155 84 aa7.37□□□□□ -1.23
CDC42EP3-204ENST00000457889 HNRNPCP07910 306 aaKnown RBP eCLIP7.37□□□□□ -1.23
CDC42EP3-204ENST00000457889 SELLP14151 372 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms