RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.36□□□□□ -1.71
PCDH9-203ENST00000456367 RAMP1O60894 148 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 SNCGO76070 127 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 PRSS1P07477 247 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 GAS1P54826 345 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 ATP5IP56385 69 aaPredicted RBP4.36□□□□□ -1.71
PCDH9-203ENST00000456367 SRSF3P84103 164 aaKnown RBP4.36□□□□□ -1.71
PCDH9-203ENST00000456367 PSG5Q15238 335 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 IBA57Q5T440 356 aaKnown RBP4.36□□□□□ -1.71
PCDH9-203ENST00000456367 ZNF774Q6NX45 483 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 RSPO2Q6UXX9 243 aaPredicted RBP4.36□□□□□ -1.71
PCDH9-203ENST00000456367 PDPNQ86YL7 162 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 RFLNBQ8N5W9 214 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 C5orf30Q96GV9 206 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 KCNS1Q96KK3 526 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 CDX2Q99626 313 aaPredicted RBP4.36□□□□□ -1.71
PCDH9-203ENST00000456367 SH3BGRL3Q9H299 93 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 NPVFQ9HCQ7 196 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 JKAMPQ9P055 326 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 SCN1AP35498 2009 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 NUMA1Q14980 2115 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 NGFP01138 241 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 ADRA2AP08913 450 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 ACRP10323 421 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 LYL1P12980 280 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 CD1BP29016 333 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 SRYQ05066 204 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.36□□□□□ -1.71
PCDH9-203ENST00000456367 MMD2Q8IY49 270 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 SELENOHQ8IZQ5 122 aaKnown RBP4.36□□□□□ -1.71
PCDH9-203ENST00000456367 OR8I2Q8N0Y5 310 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 OR4S2Q8NH73 311 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 FOXB1Q99853 325 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 CITED2Q99967 270 aaPredicted RBP4.36□□□□□ -1.71
PCDH9-203ENST00000456367 AAMDCQ9H7C9 122 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 CYTL1Q9NRR1 136 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 FGF21Q9NSA1 209 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 CCL26Q9Y258 94 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 MIA3Q5JRA6 1907 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 A1L4Q6 167 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 LILRA5A6NI73 299 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 C1QCP02747 245 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 UMODP07911 640 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 CD38P28907 300 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 SRIP30626 198 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 CA7P43166 264 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 LTC4SQ16873 150 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 OR10J3Q5JRS4 329 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.36□□□□□ -1.71
PCDH9-203ENST00000456367 OR2M7Q8NG81 312 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 OR8B3Q8NGG8 313 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 OR4P4Q8NGL7 312 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 RCC1LQ96I51 464 aaKnown RBP4.36□□□□□ -1.71
PCDH9-203ENST00000456367 SPSB2Q99619 263 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 ST20Q9HBF5 79 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 IL23AQ9NPF7 189 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 A0A1W2PNR3 127 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 SCRG1O75711 98 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 TNFSF15O95150 251 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 EML2O95834 649 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 ORM1P02763 201 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 SNRPCP09234 159 aaKnown RBP4.36□□□□□ -1.71
PCDH9-203ENST00000456367 IGFBP6P24592 240 aaPredicted RBP4.36□□□□□ -1.71
PCDH9-203ENST00000456367 CAPZBP47756 277 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 RRADP55042 308 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 DSCR4P56555 118 aaPredicted RBP4.36□□□□□ -1.71
PCDH9-203ENST00000456367 ACSF3Q4G176 576 aaPredicted RBP4.36□□□□□ -1.71
PCDH9-203ENST00000456367 NFAM1Q8NET5 270 aaPredicted RBP4.36□□□□□ -1.71
PCDH9-203ENST00000456367 OR4F17Q8NGA8 305 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 MBD3L1Q8WWY6 194 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 GRAMD2BQ96HH9 432 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 SF3B5Q9BWJ5 86 aaKnown RBP4.36□□□□□ -1.71
PCDH9-203ENST00000456367 RPRMQ9NS64 109 aa4.36□□□□□ -1.71
PCDH9-203ENST00000456367 IGLV1-36A0A0B4J1U3 117 aa4.35□□□□□ -1.71
PCDH9-203ENST00000456367 CRYAAP02489 173 aa4.35□□□□□ -1.71
PCDH9-203ENST00000456367 ZNF735P0CB33 412 aa4.35□□□□□ -1.71
PCDH9-203ENST00000456367 CDAP32320 146 aa4.35□□□□□ -1.71
PCDH9-203ENST00000456367 PRDX4Q13162 271 aa4.35□□□□□ -1.71
PCDH9-203ENST00000456367 TCTN1Q2MV58 587 aa4.35□□□□□ -1.71
PCDH9-203ENST00000456367 LRRC75BQ2VPJ9 315 aa4.35□□□□□ -1.71
PCDH9-203ENST00000456367 CST9Q5W186 159 aa4.35□□□□□ -1.71
PCDH9-203ENST00000456367 OTPQ5XKR4 325 aa4.35□□□□□ -1.71
PCDH9-203ENST00000456367 TMEM116Q8NCL8 245 aa4.35□□□□□ -1.71
PCDH9-203ENST00000456367 OR10AG1Q8NH19 301 aa4.35□□□□□ -1.71
PCDH9-203ENST00000456367 SLC25A28Q96A46 364 aa4.35□□□□□ -1.71
PCDH9-203ENST00000456367 FAM234AQ9H0X4 552 aa4.35□□□□□ -1.71
PCDH9-203ENST00000456367 PRNDQ9UKY0 176 aa4.35□□□□□ -1.71
PCDH9-203ENST00000456367 LIPT2A6NK58 231 aa4.35□□□□□ -1.71
PCDH9-203ENST00000456367 GRPP07492 148 aa4.35□□□□□ -1.71
PCDH9-203ENST00000456367 MST1P26927 711 aa4.35□□□□□ -1.71
PCDH9-203ENST00000456367 RND2P52198 227 aa4.35□□□□□ -1.71
PCDH9-203ENST00000456367 RBM11P57052 281 aaKnown RBP4.35□□□□□ -1.71
PCDH9-203ENST00000456367 RPS4XP62701 263 aaKnown RBP4.35□□□□□ -1.71
PCDH9-203ENST00000456367 LDLRAD2Q5SZI1 272 aa4.35□□□□□ -1.71
PCDH9-203ENST00000456367 VASH2Q86V25 355 aa4.35□□□□□ -1.71
PCDH9-203ENST00000456367 DOLPP1Q86YN1 238 aa4.35□□□□□ -1.71
PCDH9-203ENST00000456367 LRTM2Q8N967 370 aa4.35□□□□□ -1.71
PCDH9-203ENST00000456367 OR2T6Q8NHC8 308 aa4.35□□□□□ -1.71
PCDH9-203ENST00000456367 GUCD1Q96NT3 240 aa4.35□□□□□ -1.71
PCDH9-203ENST00000456367 MESP1Q9BRJ9 268 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms