RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 SLC31A2O15432 143 aa16.86■□□□□ 0.29
HMGB3-205ENST00000455596 ARL6IP5O75915 188 aa16.86■□□□□ 0.29
HMGB3-205ENST00000455596 EBI3Q14213 229 aa16.86■□□□□ 0.29
HMGB3-205ENST00000455596 IZUMO1Q8IYV9 350 aa16.86■□□□□ 0.29
HMGB3-205ENST00000455596 RTN4IP1Q8WWV3 396 aaPredicted RBP16.86■□□□□ 0.29
HMGB3-205ENST00000455596 CYYR1Q96J86 154 aa16.86■□□□□ 0.29
HMGB3-205ENST00000455596 MGLLQ99685 303 aa16.86■□□□□ 0.29
HMGB3-205ENST00000455596 SULT4A1Q9BR01 284 aa16.86■□□□□ 0.29
HMGB3-205ENST00000455596 TM2D1Q9BX74 207 aa16.86■□□□□ 0.29
HMGB3-205ENST00000455596 KCNK15Q9H427 330 aa16.86■□□□□ 0.29
HMGB3-205ENST00000455596 BLOC1S6Q9UL45 172 aa16.86■□□□□ 0.29
HMGB3-205ENST00000455596 IGHV3-72A0A0B4J1Y9 119 aa16.85■□□□□ 0.29
HMGB3-205ENST00000455596 A0A1W2PRX2 142 aa16.85■□□□□ 0.29
HMGB3-205ENST00000455596 TMEM14DPA8MWL7 114 aa16.85■□□□□ 0.29
HMGB3-205ENST00000455596 TXNL1O43396 289 aa16.85■□□□□ 0.29
HMGB3-205ENST00000455596 BPNT1O95861 308 aa16.85■□□□□ 0.29
HMGB3-205ENST00000455596 MAP2K4P45985 399 aa16.85■□□□□ 0.29
HMGB3-205ENST00000455596 UNC119Q13432 240 aa16.85■□□□□ 0.29
HMGB3-205ENST00000455596 CT45A1Q5HYN5 189 aa16.85■□□□□ 0.29
HMGB3-205ENST00000455596 CT45A3Q8NHU0 189 aa16.85■□□□□ 0.29
HMGB3-205ENST00000455596 NICN1Q9BSH3 213 aa16.85■□□□□ 0.29
HMGB3-205ENST00000455596 PLGRKTQ9HBL7 147 aa16.85■□□□□ 0.29
HMGB3-205ENST00000455596 OR2S2Q9NQN1 319 aa16.85■□□□□ 0.29
HMGB3-205ENST00000455596 RAB26Q9ULW5 256 aa16.85■□□□□ 0.29
HMGB3-205ENST00000455596 TCRBV4S1A1TA0A5B7 111 aa16.84■□□□□ 0.29
HMGB3-205ENST00000455596 ZNF134P52741 427 aa16.84■□□□□ 0.29
HMGB3-205ENST00000455596 ZNF137PP52743 207 aa16.84■□□□□ 0.29
HMGB3-205ENST00000455596 QRFPP83859 136 aa16.84■□□□□ 0.29
HMGB3-205ENST00000455596 TBCEQ15813 527 aaPredicted RBP16.84■□□□□ 0.29
HMGB3-205ENST00000455596 MORN2Q502X0 79 aa16.84■□□□□ 0.29
HMGB3-205ENST00000455596 STEAP3Q658P3 488 aa16.84■□□□□ 0.29
HMGB3-205ENST00000455596 C6orf201Q7Z4U5 140 aa16.84■□□□□ 0.29
HMGB3-205ENST00000455596 TGIF2LXQ8IUE1 241 aa16.84■□□□□ 0.29
HMGB3-205ENST00000455596 OR2T10Q8NGZ9 312 aa16.84■□□□□ 0.29
HMGB3-205ENST00000455596 EAF1Q96JC9 268 aaPredicted RBP16.84■□□□□ 0.29
HMGB3-205ENST00000455596 FAAP24Q9BTP7 215 aa16.84■□□□□ 0.29
HMGB3-205ENST00000455596 JPT1Q9UK76 154 aa16.84■□□□□ 0.29
HMGB3-205ENST00000455596 LRRC42Q9Y546 428 aa16.84■□□□□ 0.29
HMGB3-205ENST00000455596 TSSC4Q9Y5U2 329 aaPredicted RBP16.84■□□□□ 0.29
HMGB3-205ENST00000455596 G3V4G9 280 aa16.83■□□□□ 0.28
HMGB3-205ENST00000455596 SLC17A2O00624 439 aa16.83■□□□□ 0.28
HMGB3-205ENST00000455596 CD1BP29016 333 aa16.83■□□□□ 0.28
HMGB3-205ENST00000455596 BLVRBP30043 206 aaPredicted RBP16.83■□□□□ 0.28
HMGB3-205ENST00000455596 FABP5Q01469 135 aa16.83■□□□□ 0.28
HMGB3-205ENST00000455596 TCTEX1D4Q5JR98 221 aa16.83■□□□□ 0.28
HMGB3-205ENST00000455596 GALMQ96C23 342 aa16.83■□□□□ 0.28
HMGB3-205ENST00000455596 GFI1Q99684 422 aa16.83■□□□□ 0.28
HMGB3-205ENST00000455596 URM1Q9BTM9 101 aaKnown RBP16.83■□□□□ 0.28
HMGB3-205ENST00000455596 ACOT13Q9NPJ3 140 aa16.83■□□□□ 0.28
HMGB3-205ENST00000455596 AK6Q9Y3D8 172 aaKnown RBP16.83■□□□□ 0.28
HMGB3-205ENST00000455596 CMYA5Q8N3K9 4069 aa16.83■□□□□ 0.28
HMGB3-205ENST00000455596 PSMB11A5LHX3 300 aa16.82■□□□□ 0.28
HMGB3-205ENST00000455596 ARSBP15848 533 aa16.82■□□□□ 0.28
HMGB3-205ENST00000455596 CALRP27797 417 aaKnown RBP16.82■□□□□ 0.28
HMGB3-205ENST00000455596 HTD2P86397 168 aa16.82■□□□□ 0.28
HMGB3-205ENST00000455596 GNMTQ14749 295 aa16.82■□□□□ 0.28
HMGB3-205ENST00000455596 P2RY14Q15391 338 aa16.82■□□□□ 0.28
HMGB3-205ENST00000455596 SAMD5Q5TGI4 173 aa16.82■□□□□ 0.28
HMGB3-205ENST00000455596 C10orf99Q6UWK7 81 aa16.82■□□□□ 0.28
HMGB3-205ENST00000455596 ZNF367Q7RTV3 350 aa16.82■□□□□ 0.28
HMGB3-205ENST00000455596 OR2W3Q7Z3T1 314 aa16.82■□□□□ 0.28
HMGB3-205ENST00000455596 OR52L2PQ8NGH6 319 aa16.82■□□□□ 0.28
HMGB3-205ENST00000455596 PLEKHJ1Q9NW61 149 aa16.82■□□□□ 0.28
HMGB3-205ENST00000455596 NCBP2LA6PVI3 153 aaKnown RBP16.81■□□□□ 0.28
HMGB3-205ENST00000455596 SERPINE3A8MV23 424 aa16.81■□□□□ 0.28
HMGB3-205ENST00000455596 YPEL1O60688 119 aa16.81■□□□□ 0.28
HMGB3-205ENST00000455596 RGS11O94810 467 aa16.81■□□□□ 0.28
HMGB3-205ENST00000455596 ATP6V1G2O95670 118 aa16.81■□□□□ 0.28
HMGB3-205ENST00000455596 MOSP00540 346 aa16.81■□□□□ 0.28
HMGB3-205ENST00000455596 PF4V1P10720 104 aa16.81■□□□□ 0.28
HMGB3-205ENST00000455596 RANBP1P43487 201 aa16.81■□□□□ 0.28
HMGB3-205ENST00000455596 HMGN3Q15651 99 aa16.81■□□□□ 0.28
HMGB3-205ENST00000455596 RAB11BQ15907 218 aa16.81■□□□□ 0.28
HMGB3-205ENST00000455596 BEAN1Q3B7T3 259 aa16.81■□□□□ 0.28
HMGB3-205ENST00000455596 KHDC1LQ5JSQ8 128 aa16.81■□□□□ 0.28
HMGB3-205ENST00000455596 C5orf24Q7Z6I8 188 aa16.81■□□□□ 0.28
HMGB3-205ENST00000455596 SLC35E3Q7Z769 313 aa16.81■□□□□ 0.28
HMGB3-205ENST00000455596 Q8N6K4 173 aa16.81■□□□□ 0.28
HMGB3-205ENST00000455596 CHPT1Q8WUD6 406 aa16.81■□□□□ 0.28
HMGB3-205ENST00000455596 YPEL2Q96QA6 119 aa16.81■□□□□ 0.28
HMGB3-205ENST00000455596 ABHD14AQ9BUJ0 271 aa16.81■□□□□ 0.28
HMGB3-205ENST00000455596 LPAR5Q9H1C0 372 aa16.81■□□□□ 0.28
HMGB3-205ENST00000455596 CHMP1AQ9HD42 196 aaPredicted RBP16.81■□□□□ 0.28
HMGB3-205ENST00000455596 ABRACLQ9P1F3 81 aa16.81■□□□□ 0.28
HMGB3-205ENST00000455596 A0A0A6YYD4 124 aa16.8■□□□□ 0.28
HMGB3-205ENST00000455596 LANCL1O43813 399 aa16.8■□□□□ 0.28
HMGB3-205ENST00000455596 IGHG2P01859 326 aa16.8■□□□□ 0.28
HMGB3-205ENST00000455596 PPP1CCP36873 323 aaKnown RBP16.8■□□□□ 0.28
HMGB3-205ENST00000455596 FOXRED2Q8IWF2 684 aa16.8■□□□□ 0.28
HMGB3-205ENST00000455596 LIN7CQ9NUP9 197 aaKnown RBP16.8■□□□□ 0.28
HMGB3-205ENST00000455596 ZNF736B4DX44 427 aaPredicted RBP16.79■□□□□ 0.28
HMGB3-205ENST00000455596 SOCS1O15524 211 aa16.79■□□□□ 0.28
HMGB3-205ENST00000455596 NAPSAO96009 420 aa16.79■□□□□ 0.28
HMGB3-205ENST00000455596 PSMD7P51665 324 aa16.79■□□□□ 0.28
HMGB3-205ENST00000455596 LY6G6FQ5SQ64 297 aa16.79■□□□□ 0.28
HMGB3-205ENST00000455596 SVOPQ8N4V2 548 aa16.79■□□□□ 0.28
HMGB3-205ENST00000455596 FAM89BQ8N5H3 189 aa16.79■□□□□ 0.28
HMGB3-205ENST00000455596 Q8N9W7 124 aa16.79■□□□□ 0.28
HMGB3-205ENST00000455596 OR51D1Q8NGF3 324 aa16.79■□□□□ 0.28
HMGB3-205ENST00000455596 SETD6Q8TBK2 473 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms