RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 IGF1P05019 195 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 SAA2P0DJI9 122 aaPredicted RBP4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 FASP25445 335 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 IL3RAP26951 378 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 PPIFP30405 207 aaKnown RBP4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 CCR9P51686 369 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 SMN1Q16637 294 aaKnown RBP4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 SYT6Q5T7P8 510 aaPredicted RBP4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 OR2G6Q5TZ20 316 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 C1orf146Q5VVC0 180 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ZNF529Q6P280 563 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ZNF497Q6ZNH5 498 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 PARP16Q8N5Y8 322 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ACBD7Q8N6N7 88 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 PXT1Q8NFP0 134 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 OR5AK2Q8NH90 309 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 PYDC1Q8WXC3 89 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 MUL1Q969V5 352 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 FAM46BQ96A09 425 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 TMEM106AQ96A25 262 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 UBE2E2Q96LR5 201 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ZNF184Q99676 751 aaPredicted RBP4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 TM2D3Q9BRN9 247 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ABHD14AQ9BUJ0 271 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 JAM3Q9BX67 310 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 TOLLIPQ9H0E2 274 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 WFDC10AQ9H1F0 79 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 OR51J1Q9H342 316 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 FBXL15Q9H469 300 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 BANF2Q9H503 90 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ZMAT4Q9H898 229 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ERVK13-1Q9NX77 482 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ETAA1Q9NY74 926 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ZMAT5Q9UDW3 170 aaKnown RBP4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 AP4S1Q9Y587 144 aa4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 SIRT4Q9Y6E7 314 aaPredicted RBP4.61□□□□□ -1.67
HLA-DPA3-207ENST00000454398 FAT2Q9NYQ8 4349 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 KIAA1109Q2LD37 5005 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 UBE2QL1A1L167 161 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ANKRD34BA5PLL1 514 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 LINC01619G3V211 115 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 FCN1O00602 326 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 NBR2O15453 112 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 LALBAP00709 142 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 IGLV1-40P01703 118 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 TRBV12-3P01733 135 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 HLA-DRB1P01911 266 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 MT-ND4P03905 459 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 CSTBP04080 98 aaKnown RBP4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ALPLP05186 524 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 LGALS1P09382 135 aaKnown RBP4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 APELAP0DMC3 54 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 OR5H8P0DN80 308 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ARSBP15848 533 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 CD1BP29016 333 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ZNF93P35789 620 aaPredicted RBP4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 RAB9AP51151 201 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ZNF137PP52743 207 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 TPPP2P59282 170 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 PPP3R1P63098 170 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 PITPNAQ00169 270 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 PAX5Q02548 391 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 GALEQ14376 348 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 C5orf64Q2M2E5 130 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 RPL39P5Q59GN2 51 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 C19orf54Q5BKX5 351 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 RAB12Q6IQ22 244 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ZNF429Q86V71 674 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 SERPINA12Q8IW75 414 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ODF3L1Q8IXM7 274 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 JAGN1Q8N5M9 183 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 LINC00311Q8N616 119 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 OR52I1Q8NGK6 324 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 OR5D14Q8NGL3 314 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 GRPEL2Q8TAA5 225 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 CLCC1Q96S66 551 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 NABP2Q9BQ15 211 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ZNF251Q9BRH9 671 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 GON7Q9BXV9 100 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 IFI27L2Q9H2X8 130 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 TAF9BQ9HBM6 251 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 OR2S2Q9NQN1 319 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 ENOPH1Q9UHY7 261 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 TRAPPC2LQ9UL33 140 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 FOXA2Q9Y261 457 aaPredicted RBP4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 DNAH2Q9P225 4427 aa4.6□□□□□ -1.67
HLA-DPA3-207ENST00000454398 RYR1P21817 5038 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 IZUMO1RA6ND01 250 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 FAM90A10PA6NDY2 464 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 LDLRAD4O15165 306 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 MAGEB3O15480 346 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 SPINT2O43291 252 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 LANCL1O43813 399 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 BAG2O95816 211 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 MAS1P04201 325 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 OR8U9P0C7N5 309 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 LIMS3P0CW19 117 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 LIMS4P0CW20 117 aa4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 EGR2P11161 476 aaPredicted RBP4.59□□□□□ -1.67
HLA-DPA3-207ENST00000454398 HOXB6P17509 224 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms