RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 TK1P04183 234 aa14.65□□□□□ -0.06
SQSTM1-204ENST00000453046 LMO1P25800 156 aa14.65□□□□□ -0.06
SQSTM1-204ENST00000453046 KCNJ3P48549 501 aa14.65□□□□□ -0.06
SQSTM1-204ENST00000453046 DEFA1P59665 94 aa14.65□□□□□ -0.06
SQSTM1-204ENST00000453046 DEFA3P59666 94 aa14.65□□□□□ -0.06
SQSTM1-204ENST00000453046 MRPS15P82914 257 aaKnown RBP14.65□□□□□ -0.06
SQSTM1-204ENST00000453046 MIDNQ504T8 468 aa14.65□□□□□ -0.06
SQSTM1-204ENST00000453046 PAN3Q58A45 887 aaKnown RBP14.65□□□□□ -0.06
SQSTM1-204ENST00000453046 TMEM200BQ69YZ2 307 aa14.65□□□□□ -0.06
SQSTM1-204ENST00000453046 TRAPPC6BQ86SZ2 158 aa14.65□□□□□ -0.06
SQSTM1-204ENST00000453046 ASCC1Q8N9N2 400 aaKnown RBP14.65□□□□□ -0.06
SQSTM1-204ENST00000453046 SUMF2Q8NBJ7 301 aa14.65□□□□□ -0.06
SQSTM1-204ENST00000453046 BEND2Q8NDZ0 799 aa14.65□□□□□ -0.06
SQSTM1-204ENST00000453046 CITED1Q99966 193 aa14.65□□□□□ -0.06
SQSTM1-204ENST00000453046 DPCDQ9BVM2 203 aaPredicted RBP14.65□□□□□ -0.06
SQSTM1-204ENST00000453046 FAM234AQ9H0X4 552 aa14.65□□□□□ -0.06
SQSTM1-204ENST00000453046 C12orf4Q9NQ89 552 aa14.65□□□□□ -0.06
SQSTM1-204ENST00000453046 H3BUX3 64 aa14.64□□□□□ -0.07
SQSTM1-204ENST00000453046 M0QZ24 198 aa14.64□□□□□ -0.07
SQSTM1-204ENST00000453046 SIRPB1O00241 398 aa14.64□□□□□ -0.07
SQSTM1-204ENST00000453046 TIMM23O14925 209 aa14.64□□□□□ -0.07
SQSTM1-204ENST00000453046 LANCL1O43813 399 aa14.64□□□□□ -0.07
SQSTM1-204ENST00000453046 SSX5O60225 188 aa14.64□□□□□ -0.07
SQSTM1-204ENST00000453046 GSTT2BP0CG30 244 aa14.64□□□□□ -0.07
SQSTM1-204ENST00000453046 DTYMKP23919 212 aa14.64□□□□□ -0.07
SQSTM1-204ENST00000453046 LGALS4P56470 323 aa14.64□□□□□ -0.07
SQSTM1-204ENST00000453046 COL10A1Q03692 680 aa14.64□□□□□ -0.07
SQSTM1-204ENST00000453046 HCP5Q6MZN7 132 aa14.64□□□□□ -0.07
SQSTM1-204ENST00000453046 NEK7Q8TDX7 302 aa14.64□□□□□ -0.07
SQSTM1-204ENST00000453046 SSX3Q99909 188 aa14.64□□□□□ -0.07
SQSTM1-204ENST00000453046 CMSS1Q9BQ75 279 aaKnown RBP14.64□□□□□ -0.07
SQSTM1-204ENST00000453046 CHST6Q9GZX3 395 aa14.64□□□□□ -0.07
SQSTM1-204ENST00000453046 PPA2Q9H2U2 334 aa14.64□□□□□ -0.07
SQSTM1-204ENST00000453046 IFT46Q9NQC8 304 aa14.64□□□□□ -0.07
SQSTM1-204ENST00000453046 AK3Q9UIJ7 227 aa14.64□□□□□ -0.07
SQSTM1-204ENST00000453046 ELF5Q9UKW6 265 aaPredicted RBP14.64□□□□□ -0.07
SQSTM1-204ENST00000453046 WIPF1O43516 503 aa14.63□□□□□ -0.07
SQSTM1-204ENST00000453046 ORC5O43913 435 aa14.63□□□□□ -0.07
SQSTM1-204ENST00000453046 CSF1P09603 554 aa14.63□□□□□ -0.07
SQSTM1-204ENST00000453046 CCL3L1P16619 93 aa14.63□□□□□ -0.07
SQSTM1-204ENST00000453046 COX7A1P24310 79 aa14.63□□□□□ -0.07
SQSTM1-204ENST00000453046 ERVFRD-1P60508 538 aa14.63□□□□□ -0.07
SQSTM1-204ENST00000453046 ASAH1Q13510 395 aa14.63□□□□□ -0.07
SQSTM1-204ENST00000453046 KLF9Q13886 244 aaPredicted RBP14.63□□□□□ -0.07
SQSTM1-204ENST00000453046 ZNF57Q68EA5 555 aaPredicted RBP14.63□□□□□ -0.07
SQSTM1-204ENST00000453046 TOMM5Q8N4H5 51 aa14.63□□□□□ -0.07
SQSTM1-204ENST00000453046 PPP1R35Q8TAP8 253 aa14.63□□□□□ -0.07
SQSTM1-204ENST00000453046 C17orf50Q8WW18 174 aa14.63□□□□□ -0.07
SQSTM1-204ENST00000453046 OCSTAMPQ9BR26 566 aa14.63□□□□□ -0.07
SQSTM1-204ENST00000453046 C7orf50Q9BRJ6 194 aaKnown RBP14.63□□□□□ -0.07
SQSTM1-204ENST00000453046 FAAP24Q9BTP7 215 aa14.63□□□□□ -0.07
SQSTM1-204ENST00000453046 RIMS4Q9H426 269 aaPredicted RBP14.63□□□□□ -0.07
SQSTM1-204ENST00000453046 C16orf95Q9H693 158 aa14.63□□□□□ -0.07
SQSTM1-204ENST00000453046 KLK11Q9UBX7 282 aa14.63□□□□□ -0.07
SQSTM1-204ENST00000453046 MEGF8Q7Z7M0 2845 aa14.63□□□□□ -0.07
SQSTM1-204ENST00000453046 ANKRD20A5PA0PJZ0 165 aa14.62□□□□□ -0.07
SQSTM1-204ENST00000453046 K7N7A8 449 aa14.62□□□□□ -0.07
SQSTM1-204ENST00000453046 CSN2P05814 226 aa14.62□□□□□ -0.07
SQSTM1-204ENST00000453046 TBPP20226 339 aa14.62□□□□□ -0.07
SQSTM1-204ENST00000453046 EDDM3BP56851 147 aa14.62□□□□□ -0.07
SQSTM1-204ENST00000453046 PROK1P58294 105 aa14.62□□□□□ -0.07
SQSTM1-204ENST00000453046 PAX5Q02548 391 aa14.62□□□□□ -0.07
SQSTM1-204ENST00000453046 DYRK1AQ13627 763 aa14.62□□□□□ -0.07
SQSTM1-204ENST00000453046 ZNF273Q14593 569 aa14.62□□□□□ -0.07
SQSTM1-204ENST00000453046 LY6EQ16553 131 aa14.62□□□□□ -0.07
SQSTM1-204ENST00000453046 ZNF782Q6ZMW2 699 aaPredicted RBP14.62□□□□□ -0.07
SQSTM1-204ENST00000453046 GDPD3Q7L5L3 318 aa14.62□□□□□ -0.07
SQSTM1-204ENST00000453046 ETAA1Q9NY74 926 aa14.62□□□□□ -0.07
SQSTM1-204ENST00000453046 TBC1D24Q9ULP9 559 aa14.62□□□□□ -0.07
SQSTM1-204ENST00000453046 TRBV6-6A0A0A6YYG2 114 aa14.61□□□□□ -0.07
SQSTM1-204ENST00000453046 UBE2QL1A1L167 161 aa14.61□□□□□ -0.07
SQSTM1-204ENST00000453046 MEIS3P1A6NDR6 274 aa14.61□□□□□ -0.07
SQSTM1-204ENST00000453046 HSPB6O14558 160 aa14.61□□□□□ -0.07
SQSTM1-204ENST00000453046 ZNF737O75373 536 aa14.61□□□□□ -0.07
SQSTM1-204ENST00000453046 TSPAN9O75954 239 aa14.61□□□□□ -0.07
SQSTM1-204ENST00000453046 NAPSAO96009 420 aa14.61□□□□□ -0.07
SQSTM1-204ENST00000453046 FCGR3AP08637 254 aa14.61□□□□□ -0.07
SQSTM1-204ENST00000453046 NAT1P18440 290 aa14.61□□□□□ -0.07
SQSTM1-204ENST00000453046 TAS2R19P59542 299 aa14.61□□□□□ -0.07
SQSTM1-204ENST00000453046 KRTAP10-3P60369 221 aa14.61□□□□□ -0.07
SQSTM1-204ENST00000453046 RGS21Q2M5E4 152 aa14.61□□□□□ -0.07
SQSTM1-204ENST00000453046 LRRC75BQ2VPJ9 315 aa14.61□□□□□ -0.07
SQSTM1-204ENST00000453046 MOB1BQ7L9L4 216 aa14.61□□□□□ -0.07
SQSTM1-204ENST00000453046 GAPTQ8N292 157 aa14.61□□□□□ -0.07
SQSTM1-204ENST00000453046 TMEM229BQ8NBD8 167 aa14.61□□□□□ -0.07
SQSTM1-204ENST00000453046 CYYR1Q96J86 154 aa14.61□□□□□ -0.07
SQSTM1-204ENST00000453046 MEGF9Q9H1U4 602 aa14.61□□□□□ -0.07
SQSTM1-204ENST00000453046 TMEM82A0PJX8 343 aa14.6□□□□□ -0.07
SQSTM1-204ENST00000453046 PSPNO60542 156 aa14.6□□□□□ -0.07
SQSTM1-204ENST00000453046 PTTG1O95997 202 aa14.6□□□□□ -0.07
SQSTM1-204ENST00000453046 FAUP35544 74 aaKnown RBP14.6□□□□□ -0.07
SQSTM1-204ENST00000453046 OR3A1P47881 315 aa14.6□□□□□ -0.07
SQSTM1-204ENST00000453046 SRSF7Q16629 238 aaKnown RBP eCLIP14.6□□□□□ -0.07
SQSTM1-204ENST00000453046 ACTBL2Q562R1 376 aa14.6□□□□□ -0.07
SQSTM1-204ENST00000453046 SLC35E4Q6ICL7 350 aa14.6□□□□□ -0.07
SQSTM1-204ENST00000453046 HOGA1Q86XE5 327 aa14.6□□□□□ -0.07
SQSTM1-204ENST00000453046 C11orf42Q8N5U0 333 aa14.6□□□□□ -0.07
SQSTM1-204ENST00000453046 POC5Q8NA72 575 aa14.6□□□□□ -0.07
SQSTM1-204ENST00000453046 SNX22Q96L94 193 aa14.6□□□□□ -0.07
SQSTM1-204ENST00000453046 HDHD3Q9BSH5 251 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms