RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 HOXB4P17483 251 aaPredicted RBP9.45□□□□□ -0.9
SCN9A-204ENST00000452182 RCVRNP35243 200 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 UBE2E1P51965 193 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 ACTBP60709 375 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 ACTG1P63261 375 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 HERPUD1Q15011 391 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 FAM120AOSQ5T036 256 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 HCP5Q6MZN7 132 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 ZNF782Q6ZMW2 699 aaPredicted RBP9.45□□□□□ -0.9
SCN9A-204ENST00000452182 C8orf31Q8N9H6 132 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 OR11H6Q8NGC7 330 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 OR52I2Q8NH67 350 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 NANPQ8TBE9 248 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 SNAPC3Q92966 411 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 TOLLIPQ9H0E2 274 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 AKIP1Q9NQ31 210 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 IFT46Q9NQC8 304 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 OR2S2Q9NQN1 319 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 GFOD1Q9NXC2 390 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 RBMX2Q9Y388 322 aaKnown RBP9.45□□□□□ -0.9
SCN9A-204ENST00000452182 TRBV6-7A0A0A0MS04 114 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 IGHV2-26A0A0B4J1V2 119 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 IGKV1-6A0A0C4DH72 117 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 CENPVL3A0A0U1RRI6 287 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 YPEL1O60688 119 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 ZBTB25P24278 435 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 DGCR2P98153 550 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 ARSJQ5FYB0 599 aaPredicted RBP9.45□□□□□ -0.9
SCN9A-204ENST00000452182 KLF17Q5JT82 389 aaPredicted RBP9.45□□□□□ -0.9
SCN9A-204ENST00000452182 GPR157Q5UAW9 335 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 LYSMD2Q8IV50 215 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 ABHD12Q8N2K0 398 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 GDPD1Q8N9F7 314 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 OR5AP2Q8NGF4 316 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 OR9G1Q8NH87 305 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 UBALD1Q8TB05 177 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 ZNF596Q8TC21 504 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 IL1F10Q8WWZ1 152 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 S100ZQ8WXG8 99 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 LHX4Q969G2 390 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 YPEL2Q96QA6 119 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 CLEC7AQ9BXN2 247 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 SRRQ9GZT4 340 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 GSX1Q9H4S2 264 aaPredicted RBP9.45□□□□□ -0.9
SCN9A-204ENST00000452182 GNG12Q9UBI6 72 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 KLK11Q9UBX7 282 aa9.45□□□□□ -0.9
SCN9A-204ENST00000452182 F8P00451 2351 aa9.44□□□□□ -0.9
SCN9A-204ENST00000452182 TRAV40A0A0B4J280 105 aa9.44□□□□□ -0.9
SCN9A-204ENST00000452182 MEIS3P1A6NDR6 274 aa9.44□□□□□ -0.9
SCN9A-204ENST00000452182 ITGB1BP1O14713 200 aa9.44□□□□□ -0.9
SCN9A-204ENST00000452182 RGS11O94810 467 aa9.44□□□□□ -0.9
SCN9A-204ENST00000452182 IGLV1-47P01700 117 aa9.44□□□□□ -0.9
SCN9A-204ENST00000452182 HNF1AP20823 631 aa9.44□□□□□ -0.9
SCN9A-204ENST00000452182 NFYBP25208 207 aa9.44□□□□□ -0.9
SCN9A-204ENST00000452182 DLX1P56177 255 aa9.44□□□□□ -0.9
SCN9A-204ENST00000452182 TAS2R46P59540 309 aa9.44□□□□□ -0.9
SCN9A-204ENST00000452182 MORN2Q502X0 79 aa9.44□□□□□ -0.9
SCN9A-204ENST00000452182 PYDC2Q56P42 97 aa9.44□□□□□ -0.9
SCN9A-204ENST00000452182 IGSF11Q5DX21 431 aa9.44□□□□□ -0.9
SCN9A-204ENST00000452182 ZNF626Q68DY1 528 aa9.44□□□□□ -0.9
SCN9A-204ENST00000452182 C5orf24Q7Z6I8 188 aa9.44□□□□□ -0.9
SCN9A-204ENST00000452182 Q8N402 240 aa9.44□□□□□ -0.9
SCN9A-204ENST00000452182 MFSD4AQ8N468 514 aa9.44□□□□□ -0.9
SCN9A-204ENST00000452182 BEND2Q8NDZ0 799 aa9.44□□□□□ -0.9
SCN9A-204ENST00000452182 SUCNR1Q9BXA5 334 aa9.44□□□□□ -0.9
SCN9A-204ENST00000452182 TAS2R8Q9NYW2 309 aa9.44□□□□□ -0.9
SCN9A-204ENST00000452182 PSG11Q9UQ72 335 aa9.44□□□□□ -0.9
SCN9A-204ENST00000452182 TLN2Q9Y4G6 2542 aa9.44□□□□□ -0.9
SCN9A-204ENST00000452182 IGHV1-69DA0A0B4J2H0 117 aa9.43□□□□□ -0.9
SCN9A-204ENST00000452182 ODF3BA8MYP8 253 aa9.43□□□□□ -0.9
SCN9A-204ENST00000452182 IGHV1-69P01742 117 aa9.43□□□□□ -0.9
SCN9A-204ENST00000452182 IGHV4-38-2P0DP08 117 aa9.43□□□□□ -0.9
SCN9A-204ENST00000452182 TBPP20226 339 aa9.43□□□□□ -0.9
SCN9A-204ENST00000452182 ARPC4P59998 168 aa9.43□□□□□ -0.9
SCN9A-204ENST00000452182 KLRD1Q13241 179 aa9.43□□□□□ -0.9
SCN9A-204ENST00000452182 LTC4SQ16873 150 aa9.43□□□□□ -0.9
SCN9A-204ENST00000452182 CHRFAM7AQ494W8 412 aa9.43□□□□□ -0.9
SCN9A-204ENST00000452182 MIDNQ504T8 468 aa9.43□□□□□ -0.9
SCN9A-204ENST00000452182 C9orf139Q6ZV77 190 aa9.43□□□□□ -0.9
SCN9A-204ENST00000452182 PNKDQ8N490 385 aa9.43□□□□□ -0.9
SCN9A-204ENST00000452182 LINC00311Q8N616 119 aa9.43□□□□□ -0.9
SCN9A-204ENST00000452182 ZNF439Q8NDP4 499 aa9.43□□□□□ -0.9
SCN9A-204ENST00000452182 OR52L2PQ8NGH6 319 aa9.43□□□□□ -0.9
SCN9A-204ENST00000452182 OR10J5Q8NHC4 309 aa9.43□□□□□ -0.9
SCN9A-204ENST00000452182 FAM216AQ8WUB2 273 aa9.43□□□□□ -0.9
SCN9A-204ENST00000452182 THAP7Q9BT49 309 aaPredicted RBP9.43□□□□□ -0.9
SCN9A-204ENST00000452182 NECAP2Q9NVZ3 263 aa9.43□□□□□ -0.9
SCN9A-204ENST00000452182 SLC23A1Q9UHI7 598 aa9.43□□□□□ -0.9
SCN9A-204ENST00000452182 CDC42EP3Q9UKI2 254 aa9.43□□□□□ -0.9
SCN9A-204ENST00000452182 NUP50Q9UKX7 468 aa9.43□□□□□ -0.9
SCN9A-204ENST00000452182 IGHV3-43A0A0B4J1X8 118 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 J3QR06 171 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 BET1O15155 118 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 HSPA12AO43301 675 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 IGHV3-43DP0DP04 118 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 COX7A1P24310 79 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 CEACAM6P40199 344 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 PRRX1P54821 245 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 GNMTQ14749 295 aa9.42□□□□□ -0.9
SCN9A-204ENST00000452182 ACTBL2Q562R1 376 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms