RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 VDAC3Q9Y277 283 aa7.4□□□□□ -1.23
LSM5-208ENST00000450169 TBL2Q9Y4P3 447 aaKnown RBP7.4□□□□□ -1.23
LSM5-208ENST00000450169 HCFC2Q9Y5Z7 792 aa7.4□□□□□ -1.23
LSM5-208ENST00000450169 TMEM56-RWDD3S4R434 201 aa7.4□□□□□ -1.23
LSM5-208ENST00000450169 CPAMD8Q8IZJ3 1885 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 IGKV1D-43A0A0B4J1Z2 117 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 PLPP3O14495 311 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 MLNRO43193 412 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 PRKNO60260 465 aaPredicted RBP7.39□□□□□ -1.23
LSM5-208ENST00000450169 ZNF253O75346 499 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 NRASP01111 189 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 KRASP01116 189 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 GPX1P07203 203 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 POU2F2P09086 479 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 HLA-DOBP13765 273 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 CDC34P49427 236 aaPredicted RBP7.39□□□□□ -1.23
LSM5-208ENST00000450169 HERV-K104P61576 105 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 SMIM21Q3B7S5 101 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 SPIN3Q5JUX0 258 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 OR4A47Q6IF82 309 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 ERASQ7Z444 233 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 NIT1Q86X76 327 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 PNKDQ8N490 385 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 OR8B12Q8NGG6 310 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 SGMS2Q8NHU3 365 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 RERGQ96A58 199 aaPredicted RBP7.39□□□□□ -1.23
LSM5-208ENST00000450169 OR6C1Q96RD1 312 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 SF3B5Q9BWJ5 86 aaKnown RBP7.39□□□□□ -1.23
LSM5-208ENST00000450169 IGLON5A6NGN9 336 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 F2Z2F3 143 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 NPIPB7O75200 414 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 TOX4O94842 621 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 CBLN1P23435 193 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 CAPZBP47756 277 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 LRRC10Q5BKY1 277 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 NMSQ5H8A3 153 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 CRIP3Q6Q6R5 217 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 SELENOHQ8IZQ5 122 aaKnown RBP7.39□□□□□ -1.23
LSM5-208ENST00000450169 UHRF2Q96PU4 802 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 RNF208Q9H0X6 261 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 NRN1Q9NPD7 142 aa7.39□□□□□ -1.23
LSM5-208ENST00000450169 H0YGG7 62 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 CXCL10P02778 98 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 C8AP07357 584 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 CCL5P13501 91 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 GLB1P16278 677 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 ARR3P36575 388 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 ARF3P61204 181 aaPredicted RBP7.38□□□□□ -1.23
LSM5-208ENST00000450169 Q0VG73 95 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 ELAVL3Q14576 367 aaKnown RBP7.38□□□□□ -1.23
LSM5-208ENST00000450169 VWA1Q6PCB0 445 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 DOK3Q7L591 496 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 ZIC4Q8N9L1 334 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 C11orf40Q8WZ69 217 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 FGF14Q92915 247 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 NEIL1Q96FI4 390 aaPredicted RBP7.38□□□□□ -1.23
LSM5-208ENST00000450169 Q96M66 194 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 MRPL18Q9H0U6 180 aaKnown RBP7.38□□□□□ -1.23
LSM5-208ENST00000450169 MBNL1Q9NR56 388 aaKnown RBP7.38□□□□□ -1.23
LSM5-208ENST00000450169 KLHL13Q9P2N7 655 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 DPRXA6NFQ7 191 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 C1QTNF9BB2RNN3 333 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 B4DGG1 531 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 CORTO00230 105 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 HMGB3O15347 200 aaKnown RBP7.38□□□□□ -1.23
LSM5-208ENST00000450169 WISP1O95388 367 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 NUDT14O95848 222 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 FCGR2AP12318 317 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 VDAC1P21796 283 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 P2RY2P41231 377 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 AMTP48728 403 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 CCR5P51681 352 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 ZNF121P58317 390 aaPredicted RBP7.38□□□□□ -1.23
LSM5-208ENST00000450169 TLE3Q04726 772 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 C8orf86Q6ZUL3 223 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 TBC1D26Q86UD7 250 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 MUC15Q8N387 334 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 RPP25LQ8N5L8 163 aaKnown RBP7.38□□□□□ -1.23
LSM5-208ENST00000450169 OR52L2PQ8NGH6 319 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 GATAD1Q8WUU5 269 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 TMEM234Q8WY98 164 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 NAT6Q93015 286 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 ZFYVE21Q9BQ24 234 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 RTN4RQ9BZR6 473 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 INSL6Q9Y581 213 aa7.38□□□□□ -1.23
LSM5-208ENST00000450169 UNC80Q8N2C7 3258 aa7.37□□□□□ -1.23
LSM5-208ENST00000450169 CHD9Q3L8U1 2897 aa7.37□□□□□ -1.23
LSM5-208ENST00000450169 GAGE12BA1L429 117 aa7.37□□□□□ -1.23
LSM5-208ENST00000450169 NPIPA5E9PKD4 350 aa7.37□□□□□ -1.23
LSM5-208ENST00000450169 UTS2O95399 124 aa7.37□□□□□ -1.23
LSM5-208ENST00000450169 PF4V1P10720 104 aa7.37□□□□□ -1.23
LSM5-208ENST00000450169 CCL1P22362 96 aa7.37□□□□□ -1.23
LSM5-208ENST00000450169 ANOS1P23352 680 aa7.37□□□□□ -1.23
LSM5-208ENST00000450169 ODF1Q14990 250 aa7.37□□□□□ -1.23
LSM5-208ENST00000450169 LRRC75BQ2VPJ9 315 aa7.37□□□□□ -1.23
LSM5-208ENST00000450169 Q5PR19 223 aa7.37□□□□□ -1.23
LSM5-208ENST00000450169 RAET1LQ5VY80 246 aa7.37□□□□□ -1.23
LSM5-208ENST00000450169 FIGLAQ6QHK4 219 aa7.37□□□□□ -1.23
LSM5-208ENST00000450169 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.37□□□□□ -1.23
LSM5-208ENST00000450169 ZNF525Q8N782 197 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms