RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	IGKV1-5	P01602	117 aa		14.31	□□□□□ -0.12
TOM1-210	ENST00000449058	IDH3G	P51553	393 aa	Predicted RBP	14.31	□□□□□ -0.12
TOM1-210	ENST00000449058	ALKBH6	Q3KRA9	238 aa		14.31	□□□□□ -0.12
TOM1-210	ENST00000449058	ZNF585B	Q52M93	769 aa		14.31	□□□□□ -0.12
TOM1-210	ENST00000449058	SFT2D1	Q8WV19	159 aa		14.31	□□□□□ -0.12
TOM1-210	ENST00000449058	ISOC2	Q96AB3	205 aa		14.31	□□□□□ -0.12
TOM1-210	ENST00000449058	CACNG5	Q9UF02	275 aa		14.31	□□□□□ -0.12
TOM1-210	ENST00000449058	FAM186A	A6NE01	2351 aa		14.31	□□□□□ -0.12
TOM1-210	ENST00000449058		A0A1W2PPH5	198 aa		14.31	□□□□□ -0.12
TOM1-210	ENST00000449058	IQCF6	A8MYZ5	107 aa		14.31	□□□□□ -0.12
TOM1-210	ENST00000449058	CDIPT	O14735	213 aa		14.31	□□□□□ -0.12
TOM1-210	ENST00000449058	CNOT4	O95628	575 aa	Known RBP	14.31	□□□□□ -0.12
TOM1-210	ENST00000449058	AGA	P20933	346 aa		14.31	□□□□□ -0.12
TOM1-210	ENST00000449058	UBE2N	P61088	152 aa	Known RBP	14.31	□□□□□ -0.12
TOM1-210	ENST00000449058	TGFBR3	Q03167	851 aa		14.31	□□□□□ -0.12
TOM1-210	ENST00000449058	GABRA6	Q16445	453 aa		14.31	□□□□□ -0.12
TOM1-210	ENST00000449058	AKR1C8P	Q5T2L2	129 aa		14.31	□□□□□ -0.12
TOM1-210	ENST00000449058	TMPRSS7	Q7RTY8	843 aa		14.31	□□□□□ -0.12
TOM1-210	ENST00000449058	SLC25A40	Q8TBP6	338 aa		14.31	□□□□□ -0.12
TOM1-210	ENST00000449058	CLCF1	Q9UBD9	225 aa		14.31	□□□□□ -0.12
TOM1-210	ENST00000449058	PPP1R3C	Q9UQK1	317 aa		14.31	□□□□□ -0.12
TOM1-210	ENST00000449058		A6NLC8	198 aa		14.3	□□□□□ -0.12
TOM1-210	ENST00000449058		H3BP45	60 aa		14.3	□□□□□ -0.12
TOM1-210	ENST00000449058	SH2D1B	O14796	132 aa		14.3	□□□□□ -0.12
TOM1-210	ENST00000449058	NXPH2	O95156	264 aa		14.3	□□□□□ -0.12
TOM1-210	ENST00000449058	TNFSF10	P50591	281 aa		14.3	□□□□□ -0.12
TOM1-210	ENST00000449058	P4HA3	Q7Z4N8	544 aa		14.3	□□□□□ -0.12
TOM1-210	ENST00000449058	PRR18	Q8N4B5	295 aa		14.3	□□□□□ -0.12
TOM1-210	ENST00000449058	RNASE11	Q8TAA1	199 aa	Known RBP	14.3	□□□□□ -0.12
TOM1-210	ENST00000449058	ACAA1	P09110	424 aa	Predicted RBP	14.3	□□□□□ -0.12
TOM1-210	ENST00000449058	SRP19	P09132	144 aa	Known RBP	14.3	□□□□□ -0.12
TOM1-210	ENST00000449058	CD200	P41217	278 aa		14.3	□□□□□ -0.12
TOM1-210	ENST00000449058	PMP22	Q01453	160 aa		14.3	□□□□□ -0.12
TOM1-210	ENST00000449058	TLE4	Q04727	773 aa		14.3	□□□□□ -0.12
TOM1-210	ENST00000449058	TMEM267	Q0VDI3	215 aa	Predicted RBP	14.3	□□□□□ -0.12
TOM1-210	ENST00000449058	LIN7C	Q9NUP9	197 aa	Known RBP	14.3	□□□□□ -0.12
TOM1-210	ENST00000449058	SYNGR2	O43760	224 aa		14.29	□□□□□ -0.12
TOM1-210	ENST00000449058	PSG7	Q13046	419 aa		14.29	□□□□□ -0.12
TOM1-210	ENST00000449058	ICAM4	Q14773	271 aa		14.29	□□□□□ -0.12
TOM1-210	ENST00000449058	ZNF506	Q5JVG8	444 aa		14.29	□□□□□ -0.12
TOM1-210	ENST00000449058	ZNF561	Q8N587	486 aa		14.29	□□□□□ -0.12
TOM1-210	ENST00000449058	UNKL	Q9H9P5	680 aa	Known RBP	14.29	□□□□□ -0.12
TOM1-210	ENST00000449058	HES4	Q9HCC6	221 aa		14.29	□□□□□ -0.12
TOM1-210	ENST00000449058	TMEM210	A6NLX4	147 aa		14.29	□□□□□ -0.12
TOM1-210	ENST00000449058	RAB5A	P20339	215 aa		14.29	□□□□□ -0.12
TOM1-210	ENST00000449058	MAS1L	P35410	378 aa		14.29	□□□□□ -0.12
TOM1-210	ENST00000449058	INO80C	Q6PI98	192 aa	Predicted RBP	14.29	□□□□□ -0.12
TOM1-210	ENST00000449058	DRAM1	Q8N682	238 aa		14.29	□□□□□ -0.12
TOM1-210	ENST00000449058	UBALD1	Q8TB05	177 aa		14.29	□□□□□ -0.12
TOM1-210	ENST00000449058	RBMXL1	Q96E39	390 aa	Known RBP	14.29	□□□□□ -0.12
TOM1-210	ENST00000449058	TMEM9B	Q9NQ34	198 aa		14.29	□□□□□ -0.12
TOM1-210	ENST00000449058	KCNS2	Q9ULS6	477 aa		14.29	□□□□□ -0.12
TOM1-210	ENST00000449058	PUS1	Q9Y606	427 aa	Known RBP eCLIP	14.29	□□□□□ -0.12
TOM1-210	ENST00000449058	TRAV1-1	A0A0B4J248	108 aa		14.28	□□□□□ -0.12
TOM1-210	ENST00000449058	C1QTNF9B	B2RNN3	333 aa		14.28	□□□□□ -0.12
TOM1-210	ENST00000449058	LYZL6	O75951	148 aa		14.28	□□□□□ -0.12
TOM1-210	ENST00000449058	SCAF4	O95104	1147 aa	Known RBP	14.28	□□□□□ -0.12
TOM1-210	ENST00000449058	IFNA5	P01569	189 aa		14.28	□□□□□ -0.12
TOM1-210	ENST00000449058	IGHG3	P01860	377 aa		14.28	□□□□□ -0.12
TOM1-210	ENST00000449058	HBE1	P02100	147 aa		14.28	□□□□□ -0.12
TOM1-210	ENST00000449058	ARG1	P05089	322 aa		14.28	□□□□□ -0.12
TOM1-210	ENST00000449058	SELE	P16581	610 aa		14.28	□□□□□ -0.12
TOM1-210	ENST00000449058	CEACAM6	P40199	344 aa		14.28	□□□□□ -0.12
TOM1-210	ENST00000449058	GUSBP1	Q15486	140 aa		14.28	□□□□□ -0.12
TOM1-210	ENST00000449058	HAGH	Q16775	308 aa		14.28	□□□□□ -0.12
TOM1-210	ENST00000449058	THNSL2	Q86YJ6	484 aa		14.28	□□□□□ -0.12
TOM1-210	ENST00000449058	YPEL4	Q96NS1	127 aa		14.28	□□□□□ -0.12
TOM1-210	ENST00000449058	C12orf57	Q99622	126 aa		14.28	□□□□□ -0.12
TOM1-210	ENST00000449058	RBM7	Q9Y580	266 aa	Known RBP	14.28	□□□□□ -0.12
TOM1-210	ENST00000449058		A0A1W2PPE2	198 aa		14.27	□□□□□ -0.12
TOM1-210	ENST00000449058		H0YL77	283 aa		14.27	□□□□□ -0.12
TOM1-210	ENST00000449058	HSPB1	P04792	205 aa	Known RBP	14.27	□□□□□ -0.12
TOM1-210	ENST00000449058	ZNF806	P0C7X5	589 aa		14.27	□□□□□ -0.12
TOM1-210	ENST00000449058	KRBOX4	Q5JUW0	171 aa		14.27	□□□□□ -0.12
TOM1-210	ENST00000449058		Q6ZT83	130 aa		14.27	□□□□□ -0.12
TOM1-210	ENST00000449058	FAM214B	Q7L5A3	538 aa		14.27	□□□□□ -0.12
TOM1-210	ENST00000449058	GCNT2	Q8N0V5	402 aa		14.27	□□□□□ -0.12
TOM1-210	ENST00000449058	CLDND2	Q8NHS1	167 aa		14.27	□□□□□ -0.12
TOM1-210	ENST00000449058	MALSU1	Q96EH3	234 aa		14.27	□□□□□ -0.12
TOM1-210	ENST00000449058	CELSR3	Q9NYQ7	3312 aa		14.27	□□□□□ -0.13
TOM1-210	ENST00000449058	C5orf52	A6NGY3	159 aa		14.27	□□□□□ -0.13
TOM1-210	ENST00000449058	HAND1	O96004	215 aa		14.27	□□□□□ -0.13
TOM1-210	ENST00000449058	GRP	P07492	148 aa		14.27	□□□□□ -0.13
TOM1-210	ENST00000449058	MPV17	P39210	176 aa		14.27	□□□□□ -0.13
TOM1-210	ENST00000449058	RPS23	P62266	143 aa	Known RBP	14.27	□□□□□ -0.13
TOM1-210	ENST00000449058	SNRPE	P62304	92 aa	Known RBP	14.27	□□□□□ -0.13
TOM1-210	ENST00000449058	FAM24B	Q8N5W8	94 aa		14.27	□□□□□ -0.13
TOM1-210	ENST00000449058	PSENEN	Q9NZ42	101 aa		14.27	□□□□□ -0.13
TOM1-210	ENST00000449058		H3BQ15	152 aa		14.26	□□□□□ -0.13
TOM1-210	ENST00000449058	PSPN	O60542	156 aa		14.26	□□□□□ -0.13
TOM1-210	ENST00000449058	WDR1	O75083	606 aa		14.26	□□□□□ -0.13
TOM1-210	ENST00000449058	ARL16	Q0P5N6	197 aa		14.26	□□□□□ -0.13
TOM1-210	ENST00000449058	HAPLN4	Q86UW8	402 aa		14.26	□□□□□ -0.13
TOM1-210	ENST00000449058	ZNF525	Q8N782	197 aa		14.26	□□□□□ -0.13
TOM1-210	ENST00000449058	KLF14	Q8TD94	323 aa	Predicted RBP	14.26	□□□□□ -0.13
TOM1-210	ENST00000449058	IGHV3-64D	A0A0J9YX35	117 aa		14.26	□□□□□ -0.13
TOM1-210	ENST00000449058	hCG_1809904	A0A1W2PP81	198 aa		14.26	□□□□□ -0.13
TOM1-210	ENST00000449058		A0A1W2PR64	198 aa		14.26	□□□□□ -0.13
TOM1-210	ENST00000449058		A0A1W2PRV1	198 aa		14.26	□□□□□ -0.13
TOM1-210	ENST00000449058	IAPP	P10997	89 aa		14.26	□□□□□ -0.13

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