RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 CARHSP1Q9Y2V2 147 aaKnown RBP12.51□□□□□ -0.41
SF1-211ENST00000448404 CSMD1Q96PZ7 3565 aa12.51□□□□□ -0.41
SF1-211ENST00000448404 GPR37O15354 613 aa12.5□□□□□ -0.41
SF1-211ENST00000448404 PRH1P02810 166 aa12.5□□□□□ -0.41
SF1-211ENST00000448404 S100A8P05109 93 aa12.5□□□□□ -0.41
SF1-211ENST00000448404 FABP9Q0Z7S8 132 aa12.5□□□□□ -0.41
SF1-211ENST00000448404 PJVKQ0ZLH3 352 aa12.5□□□□□ -0.41
SF1-211ENST00000448404 C22orf34Q6ZV56 151 aa12.5□□□□□ -0.41
SF1-211ENST00000448404 DUSP13Q9UII6 198 aa12.5□□□□□ -0.41
SF1-211ENST00000448404 LRBAP50851 2863 aa12.5□□□□□ -0.41
SF1-211ENST00000448404 C5orf52A6NGY3 159 aa12.5□□□□□ -0.41
SF1-211ENST00000448404 OR5B21A6NL26 309 aa12.5□□□□□ -0.41
SF1-211ENST00000448404 WRBO00258 174 aa12.5□□□□□ -0.41
SF1-211ENST00000448404 CHST1O43916 411 aa12.5□□□□□ -0.41
SF1-211ENST00000448404 IGKV1-39P01597 117 aa12.5□□□□□ -0.41
SF1-211ENST00000448404 IGKV1D-39P04432 117 aa12.5□□□□□ -0.41
SF1-211ENST00000448404 PPP1CCP36873 323 aaKnown RBP12.5□□□□□ -0.41
SF1-211ENST00000448404 UCP3P55916 312 aa12.5□□□□□ -0.41
SF1-211ENST00000448404 TMEM267Q0VDI3 215 aaPredicted RBP12.5□□□□□ -0.41
SF1-211ENST00000448404 TESK1Q15569 626 aa12.5□□□□□ -0.41
SF1-211ENST00000448404 Q6ZT83 130 aa12.5□□□□□ -0.41
SF1-211ENST00000448404 C14orf79Q96F83 325 aa12.5□□□□□ -0.41
SF1-211ENST00000448404 AKR1E2Q96JD6 320 aa12.5□□□□□ -0.41
SF1-211ENST00000448404 SMIM8Q96KF7 97 aa12.5□□□□□ -0.41
SF1-211ENST00000448404 RTL8AQ9BWD3 113 aa12.5□□□□□ -0.41
SF1-211ENST00000448404 IAPPP10997 89 aa12.49□□□□□ -0.41
SF1-211ENST00000448404 S100PP25815 95 aa12.49□□□□□ -0.41
SF1-211ENST00000448404 PMELP40967 661 aa12.49□□□□□ -0.41
SF1-211ENST00000448404 HLA-DRB3P79483 266 aa12.49□□□□□ -0.41
SF1-211ENST00000448404 TGFBR3Q03167 851 aa12.49□□□□□ -0.41
SF1-211ENST00000448404 FAM201AQ5SY85 155 aa12.49□□□□□ -0.41
SF1-211ENST00000448404 SAXO1Q8IYX7 474 aa12.49□□□□□ -0.41
SF1-211ENST00000448404 BOD1Q96IK1 185 aa12.49□□□□□ -0.41
SF1-211ENST00000448404 MMP26Q9NRE1 261 aa12.49□□□□□ -0.41
SF1-211ENST00000448404 TAAR3PQ9P1P4 343 aa12.49□□□□□ -0.41
SF1-211ENST00000448404 IGHV2-70P01814 119 aa12.49□□□□□ -0.41
SF1-211ENST00000448404 SFTA3P0C7M3 94 aa12.49□□□□□ -0.41
SF1-211ENST00000448404 DAOP14920 347 aa12.49□□□□□ -0.41
SF1-211ENST00000448404 CEACAM6P40199 344 aa12.49□□□□□ -0.41
SF1-211ENST00000448404 TLE1Q04724 770 aa12.49□□□□□ -0.41
SF1-211ENST00000448404 C10orf91Q5T1B1 145 aa12.49□□□□□ -0.41
SF1-211ENST00000448404 BTNL3Q6UXE8 466 aa12.49□□□□□ -0.41
SF1-211ENST00000448404 LILRB2Q8N423 598 aa12.49□□□□□ -0.41
SF1-211ENST00000448404 OR2C3Q8N628 320 aa12.49□□□□□ -0.41
SF1-211ENST00000448404 LRTM2Q8N967 370 aa12.49□□□□□ -0.41
SF1-211ENST00000448404 OR52L2PQ8NGH6 319 aa12.49□□□□□ -0.41
SF1-211ENST00000448404 OR2W1Q9Y3N9 320 aa12.49□□□□□ -0.41
SF1-211ENST00000448404 KIR2DS1A0A191URI9 304 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 C1orf196B1AJZ1 125 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 CDS2O95674 445 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 PTBP3O95758 552 aaKnown RBP12.48□□□□□ -0.41
SF1-211ENST00000448404 KIR2DS4P43632 304 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 OR3A1P47881 315 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 SULT1A2P50226 295 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 ZNF83P51522 516 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 CCL20P78556 96 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 KIR2DS1Q14954 304 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 C9orf152Q5JTZ5 239 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 C11orf53Q8IXP5 236 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 OR10V1Q8NGI7 309 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 OR5C1Q8NGR4 320 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 RNASE11Q8TAA1 199 aaKnown RBP12.48□□□□□ -0.41
SF1-211ENST00000448404 FAM213BQ8TBF2 198 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 MRGPRDQ8TDS7 321 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 CLCC1Q96S66 551 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 NRIP2Q9BQI9 281 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 PLSCR2Q9NRY7 297 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 SH3BGRL2Q9UJC5 107 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 TMED3Q9Y3Q3 217 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 RNASEK-C17orf49H0YIS7 233 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 TIMM8AO60220 97 aaPredicted RBP12.48□□□□□ -0.41
SF1-211ENST00000448404 JTBO76095 146 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 IGHG3P01860 377 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 SSTR5P35346 364 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 TCF15Q12870 199 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 UTF1Q5T230 341 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 GPR146Q96CH1 333 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 SEC11CQ9BY50 192 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 FBXO7Q9Y3I1 522 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 POMT1Q9Y6A1 747 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 COL12A1Q99715 3063 aa12.48□□□□□ -0.41
SF1-211ENST00000448404 IGHV3OR15-7A0A075B7D8 119 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 GPR137BO60478 399 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 RAMP3O60896 148 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 TNFSF13O75888 250 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 F2RP25116 425 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 DYNLT3P51808 116 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 EDDM3AQ14507 147 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 ACSF3Q4G176 576 aaPredicted RBP12.47□□□□□ -0.41
SF1-211ENST00000448404 SPINK9Q5DT21 86 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 NMSQ5H8A3 153 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 FAM180AQ6UWF9 173 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 BTNL8Q6UX41 500 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 H1FOOQ8IZA3 346 aaPredicted RBP12.47□□□□□ -0.41
SF1-211ENST00000448404 TRAV17A0A0B4J275 112 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 FAM90A10PA6NDY2 464 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 FAM90A18PA6NE21 464 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 FAM90A16PA6NEW6 464 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 FAM90A20PA6NIJ5 464 aa12.47□□□□□ -0.41
SF1-211ENST00000448404 FAM90A8PA6NJQ4 464 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms