RNA–Protein interactions for RNA: ENST00000447906.6

OTUD4-201, Transcript of OTU deubiquitinase 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene OTUD4, Length 3,829 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-201ENST00000447906 TNFSF4P23510 183 aa11.97□□□□□ -0.49
OTUD4-201ENST00000447906 SLC38A11Q08AI6 406 aa11.97□□□□□ -0.49
OTUD4-201ENST00000447906 RIPPLY2Q5TAB7 128 aa11.97□□□□□ -0.49
OTUD4-201ENST00000447906 WFDC8Q8IUA0 241 aa11.97□□□□□ -0.49
OTUD4-201ENST00000447906 SCCPDHQ8NBX0 429 aa11.97□□□□□ -0.49
OTUD4-201ENST00000447906 LRRC29Q8WV35 223 aa11.97□□□□□ -0.49
OTUD4-201ENST00000447906 MOB3AQ96BX8 217 aa11.97□□□□□ -0.49
OTUD4-201ENST00000447906 TOLLIPQ9H0E2 274 aa11.97□□□□□ -0.49
OTUD4-201ENST00000447906 PARP11Q9NR21 331 aa11.97□□□□□ -0.49
OTUD4-201ENST00000447906 hCG_38984A0A1B0GV85 526 aa11.96□□□□□ -0.49
OTUD4-201ENST00000447906 A0A1W2PPE3 182 aa11.96□□□□□ -0.49
OTUD4-201ENST00000447906 M0R296 226 aa11.96□□□□□ -0.49
OTUD4-201ENST00000447906 SCGB1D1O95968 90 aa11.96□□□□□ -0.49
OTUD4-201ENST00000447906 F2RP25116 425 aa11.96□□□□□ -0.49
OTUD4-201ENST00000447906 TMEM187Q14656 261 aa11.96□□□□□ -0.49
OTUD4-201ENST00000447906 BSCL2Q96G97 398 aaPredicted RBP11.96□□□□□ -0.49
OTUD4-201ENST00000447906 RPH3ALQ9UNE2 315 aa11.96□□□□□ -0.49
OTUD4-201ENST00000447906 CYTIPO60759 359 aa11.96□□□□□ -0.49
OTUD4-201ENST00000447906 GNG10P50151 68 aa11.96□□□□□ -0.49
OTUD4-201ENST00000447906 TMEM222Q9H0R3 208 aa11.96□□□□□ -0.49
OTUD4-201ENST00000447906 PNRC2Q9NPJ4 139 aaKnown RBP11.96□□□□□ -0.49
OTUD4-201ENST00000447906 IGKV1-27A0A075B6S5 117 aa11.96□□□□□ -0.5
OTUD4-201ENST00000447906 J3QT63 122 aa11.96□□□□□ -0.5
OTUD4-201ENST00000447906 SEC11BP0C7V7 166 aa11.96□□□□□ -0.5
OTUD4-201ENST00000447906 ZNF343Q6P1L6 599 aa11.96□□□□□ -0.5
OTUD4-201ENST00000447906 ZNF880Q6PDB4 577 aa11.96□□□□□ -0.5
OTUD4-201ENST00000447906 ABHD14BQ96IU4 210 aa11.96□□□□□ -0.5
OTUD4-201ENST00000447906 RAB40CQ96S21 281 aa11.96□□□□□ -0.5
OTUD4-201ENST00000447906 LAMP3Q9UQV4 416 aa11.96□□□□□ -0.5
OTUD4-201ENST00000447906 MAP1LC3B2A6NCE7 125 aa11.95□□□□□ -0.5
OTUD4-201ENST00000447906 SSTP61278 116 aa11.95□□□□□ -0.5
OTUD4-201ENST00000447906 SMIM21Q3B7S5 101 aa11.95□□□□□ -0.5
OTUD4-201ENST00000447906 MAP1LC3BQ9GZQ8 125 aa11.95□□□□□ -0.5
OTUD4-201ENST00000447906 DLL3Q9NYJ7 618 aa11.95□□□□□ -0.5
OTUD4-201ENST00000447906 KCNMB1Q16558 191 aa11.95□□□□□ -0.5
OTUD4-201ENST00000447906 CYB561D1Q8N8Q1 229 aa11.95□□□□□ -0.5
OTUD4-201ENST00000447906 PATZ1Q9HBE1 687 aaKnown RBP11.95□□□□□ -0.5
OTUD4-201ENST00000447906 TUBG2Q9NRH3 451 aa11.95□□□□□ -0.5
OTUD4-201ENST00000447906 MTCH1Q9NZJ7 389 aa11.95□□□□□ -0.5
OTUD4-201ENST00000447906 CLN8Q9UBY8 286 aa11.95□□□□□ -0.5
OTUD4-201ENST00000447906 MED13Q9UHV7 2174 aa11.95□□□□□ -0.5
OTUD4-201ENST00000447906 TRAV17A0A0B4J275 112 aa11.95□□□□□ -0.5
OTUD4-201ENST00000447906 F8VVB4 439 aa11.95□□□□□ -0.5
OTUD4-201ENST00000447906 F8VWA3 439 aa11.95□□□□□ -0.5
OTUD4-201ENST00000447906 H0YL77 283 aa11.95□□□□□ -0.5
OTUD4-201ENST00000447906 ST8SIA5O15466 376 aa11.95□□□□□ -0.5
OTUD4-201ENST00000447906 KLK10O43240 276 aa11.95□□□□□ -0.5
OTUD4-201ENST00000447906 SRSF10O75494 262 aaKnown RBP11.95□□□□□ -0.5
OTUD4-201ENST00000447906 HAND1O96004 215 aa11.95□□□□□ -0.5
OTUD4-201ENST00000447906 SLC25A6P12236 298 aa11.95□□□□□ -0.5
OTUD4-201ENST00000447906 ANOS1P23352 680 aa11.95□□□□□ -0.5
OTUD4-201ENST00000447906 EIF3IQ13347 325 aaKnown RBP11.95□□□□□ -0.5
OTUD4-201ENST00000447906 OR52L2PQ8NGH6 319 aa11.95□□□□□ -0.5
OTUD4-201ENST00000447906 NABP1Q96AH0 204 aa11.95□□□□□ -0.5
OTUD4-201ENST00000447906 TCEAL7Q9BRU2 100 aa11.95□□□□□ -0.5
OTUD4-201ENST00000447906 GAR1Q9NY12 217 aaKnown RBP11.95□□□□□ -0.5
OTUD4-201ENST00000447906 CHD9Q3L8U1 2897 aa11.94□□□□□ -0.5
OTUD4-201ENST00000447906 IGHV3OR15-7A0A075B7D8 119 aa11.94□□□□□ -0.5
OTUD4-201ENST00000447906 C17orf112F2Z3M2 114 aa11.94□□□□□ -0.5
OTUD4-201ENST00000447906 RAB5AP20339 215 aa11.94□□□□□ -0.5
OTUD4-201ENST00000447906 HLA-DRB3P79483 266 aa11.94□□□□□ -0.5
OTUD4-201ENST00000447906 QRFPP83859 136 aa11.94□□□□□ -0.5
OTUD4-201ENST00000447906 C1orf87Q8N0U7 546 aa11.94□□□□□ -0.5
OTUD4-201ENST00000447906 ZNF610Q8N9Z0 462 aa11.94□□□□□ -0.5
OTUD4-201ENST00000447906 ABHD14AQ9BUJ0 271 aa11.94□□□□□ -0.5
OTUD4-201ENST00000447906 WIPF3A6NGB9 483 aa11.94□□□□□ -0.5
OTUD4-201ENST00000447906 PPP5D1E7EU14 171 aa11.94□□□□□ -0.5
OTUD4-201ENST00000447906 H3BQ15 152 aa11.94□□□□□ -0.5
OTUD4-201ENST00000447906 PGLYRP1O75594 196 aaPredicted RBP11.94□□□□□ -0.5
OTUD4-201ENST00000447906 OR2H2O95918 312 aa11.94□□□□□ -0.5
OTUD4-201ENST00000447906 CD200P41217 278 aa11.94□□□□□ -0.5
OTUD4-201ENST00000447906 MZT1Q08AG7 82 aa11.94□□□□□ -0.5
OTUD4-201ENST00000447906 S1PR3Q99500 378 aa11.94□□□□□ -0.5
OTUD4-201ENST00000447906 CACFD1Q9UGQ2 172 aa11.94□□□□□ -0.5
OTUD4-201ENST00000447906 ATP23Q9Y6H3 246 aa11.94□□□□□ -0.5
OTUD4-201ENST00000447906 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.94□□□□□ -0.51e-6■■■■■ 33.4
OTUD4-201ENST00000447906 LOC102723996A0A087X1L8 192 aa11.94□□□□□ -0.5
OTUD4-201ENST00000447906 TSTD3H0UI37 97 aa11.94□□□□□ -0.5
OTUD4-201ENST00000447906 TFF1P04155 84 aa11.94□□□□□ -0.5
OTUD4-201ENST00000447906 RPP30P78346 268 aaKnown RBP11.94□□□□□ -0.5
OTUD4-201ENST00000447906 RPL19P84098 196 aaKnown RBP11.94□□□□□ -0.5
OTUD4-201ENST00000447906 HGFACQ04756 655 aa11.94□□□□□ -0.5
OTUD4-201ENST00000447906 PLGLAQ15195 96 aa11.94□□□□□ -0.5
OTUD4-201ENST00000447906 FAM209BQ5JX69 171 aa11.94□□□□□ -0.5
OTUD4-201ENST00000447906 FFAR4Q5NUL3 377 aa11.94□□□□□ -0.5
OTUD4-201ENST00000447906 FAM89BQ8N5H3 189 aa11.94□□□□□ -0.5
OTUD4-201ENST00000447906 SNX22Q96L94 193 aa11.94□□□□□ -0.5
OTUD4-201ENST00000447906 TM2D1Q9BX74 207 aa11.94□□□□□ -0.5
OTUD4-201ENST00000447906 CUL9Q8IWT3 2517 aa11.94□□□□□ -0.5
OTUD4-201ENST00000447906 ZNF716A6NP11 495 aa11.93□□□□□ -0.5
OTUD4-201ENST00000447906 C21orf140B9A014 251 aa11.93□□□□□ -0.5
OTUD4-201ENST00000447906 SPINK4O60575 86 aa11.93□□□□□ -0.5
OTUD4-201ENST00000447906 DLK1P80370 383 aa11.93□□□□□ -0.5
OTUD4-201ENST00000447906 H3F3AP84243 136 aa11.93□□□□□ -0.5
OTUD4-201ENST00000447906 NCR3LG1Q68D85 454 aa11.93□□□□□ -0.5
OTUD4-201ENST00000447906 LYG1Q8N1E2 194 aa11.93□□□□□ -0.5
OTUD4-201ENST00000447906 GPR146Q96CH1 333 aa11.93□□□□□ -0.5
OTUD4-201ENST00000447906 ZNF665Q9H7R5 613 aa11.93□□□□□ -0.5
OTUD4-201ENST00000447906 LAMA1P25391 3075 aa11.93□□□□□ -0.5
OTUD4-201ENST00000447906 IGKV1D-13A0A0B4J2D9 117 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms