RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 GOSR2O14653 212 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 PPP1R2P9O14990 202 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 FABP7O15540 132 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 SSNA1O43805 119 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 SOX15O60248 233 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 SLC16A7O60669 478 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 RAD1O60671 282 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 ZNF780AO75290 641 aaPredicted RBP3.11□□□□□ -1.91
VPS29-202ENST00000447578 AHSA1O95433 338 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 ALOX5APP20292 161 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 KIR3DL2P43630 455 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 CDKN1BP46527 198 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 P2RX1P51575 399 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 FBXW4P57775 412 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 AP3S2P59780 193 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 CXCL6P80162 114 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 PRR4Q16378 134 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 GSG1Q2KHT4 349 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 Q499Y3 187 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 KLF17Q5JT82 389 aaPredicted RBP3.11□□□□□ -1.91
VPS29-202ENST00000447578 TMEM69Q5SWH9 247 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 WDR74Q6RFH5 385 aaPredicted RBP3.11□□□□□ -1.91
VPS29-202ENST00000447578 LRRN1Q6UXK5 716 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 C16orf47Q6ZP98 133 aaPredicted RBP3.11□□□□□ -1.91
VPS29-202ENST00000447578 SLC25A48Q6ZT89 311 aaKnown RBP3.11□□□□□ -1.91
VPS29-202ENST00000447578 KRTAP5-5Q701N2 237 aaPredicted RBP3.11□□□□□ -1.91
VPS29-202ENST00000447578 SLC35D2Q76EJ3 337 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 COX15Q7KZN9 410 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 ASCL5Q7RTU5 278 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 SLC16A14Q7RTX9 510 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 GRINAQ7Z429 371 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 PPP1R27Q86WC6 154 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 SLC25A45Q8N413 288 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 ZNF676Q8N7Q3 588 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 OR11H7Q8NGC8 314 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 OR4A4PQ8NGN8 299 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 OR2G2Q8NGZ5 317 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 OR10AC1Q8NH08 325 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 OR8K3Q8NH51 312 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 GRPEL2Q8TAA5 225 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 HAVCR2Q8TDQ0 301 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 ZNF431Q8TF32 576 aaPredicted RBP3.11□□□□□ -1.91
VPS29-202ENST00000447578 SMIM4Q8WVI0 70 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 GIMAP1Q8WWP7 306 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 TMEM234Q8WY98 164 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 NRGNQ92686 78 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 SLC25A38Q96DW6 304 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 S100A16Q96FQ6 103 aaKnown RBP3.11□□□□□ -1.91
VPS29-202ENST00000447578 HYLS1Q96M11 299 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 OR8B4Q96RC9 309 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 AMELYQ99218 206 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 ULBP3Q9BZM4 244 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 OR11A1Q9GZK7 315 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 C20orf85Q9H1P6 137 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 UBE2ZQ9H832 354 aaPredicted RBP3.11□□□□□ -1.91
VPS29-202ENST00000447578 PLEKHA1Q9HB21 404 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 HRASLSQ9HDD0 168 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 TREM2Q9NZC2 230 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 COPZ2Q9P299 210 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 PEF1Q9UBV8 284 aaKnown RBP3.11□□□□□ -1.91
VPS29-202ENST00000447578 CTSFQ9UBX1 484 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 OR5V1Q9UGF6 321 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 KLK13Q9UKR3 277 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 SLC22A13Q9Y226 551 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 HSPB11Q9Y547 144 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 TMEM14AQ9Y6G1 99 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 NUP214P35658 2090 aaPredicted RBP3.11□□□□□ -1.91
VPS29-202ENST00000447578 GON4LQ3T8J9 2241 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 IGLV8-61A0A075B6I0 122 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 IGHV3-35A0A0C4DH35 117 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 A0A0G2JRQ6 117 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 PRSS37A4D1T9 235 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 NAP1L6A6NFF2 107 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 GABARAPH6UMI1 98 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 K7N7A8 449 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 CCL21O00585 134 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 PLPP3O14495 311 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 GPR171O14626 319 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 SULT1B1O43704 296 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 GMDSO60547 372 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 ALOX12BO75342 701 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 GLSO94925 669 aaPredicted RBP3.1□□□□□ -1.91
VPS29-202ENST00000447578 MPZL1O95297 269 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 IGHMP01871 453 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 GIMD1P0DJR0 217 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 PTHLHP12272 177 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 CTLA4P16410 223 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 ZNF823P16415 610 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 CXCL3P19876 107 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 TBPP20226 339 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 CDK2P24941 298 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 GDF1P27539 372 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 CD1BP29016 333 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 HTR2BP41595 481 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 CX3CR1P49238 355 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 BLVRAP53004 296 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 TAS2R20P59543 309 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 CCL7P80098 99 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 PAX5Q02548 391 aa3.1□□□□□ -1.91
VPS29-202ENST00000447578 ANGPT1Q15389 498 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms