RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 ABHD5Q8WTS1 349 aa16.22■□□□□ 0.19
SDCBP-204ENST00000447182 RDH5Q92781 318 aa16.22■□□□□ 0.19
SDCBP-204ENST00000447182 RCC1LQ96I51 464 aaKnown RBP16.22■□□□□ 0.19
SDCBP-204ENST00000447182 VSIRQ9H7M9 311 aa16.22■□□□□ 0.19
SDCBP-204ENST00000447182 DLL3Q9NYJ7 618 aa16.22■□□□□ 0.19
SDCBP-204ENST00000447182 PSENENQ9NZ42 101 aa16.22■□□□□ 0.19
SDCBP-204ENST00000447182 BOKQ9UMX3 212 aaPredicted RBP16.22■□□□□ 0.19
SDCBP-204ENST00000447182 PTBP3O95758 552 aaKnown RBP16.21■□□□□ 0.19
SDCBP-204ENST00000447182 SERPINA7P05543 415 aa16.21■□□□□ 0.19
SDCBP-204ENST00000447182 ARR3P36575 388 aa16.21■□□□□ 0.19
SDCBP-204ENST00000447182 MDH2P40926 338 aaKnown RBP16.21■□□□□ 0.19
SDCBP-204ENST00000447182 CD81P60033 236 aa16.21■□□□□ 0.19
SDCBP-204ENST00000447182 GNG3P63215 75 aa16.21■□□□□ 0.19
SDCBP-204ENST00000447182 HBG1P69891 147 aa16.21■□□□□ 0.19
SDCBP-204ENST00000447182 HBG2P69892 147 aa16.21■□□□□ 0.19
SDCBP-204ENST00000447182 ARL16Q0P5N6 197 aa16.21■□□□□ 0.19
SDCBP-204ENST00000447182 IZUMO4Q1ZYL8 232 aa16.21■□□□□ 0.19
SDCBP-204ENST00000447182 MRGPRGQ86SM5 289 aa16.21■□□□□ 0.19
SDCBP-204ENST00000447182 ZNF383Q8NA42 475 aa16.21■□□□□ 0.19
SDCBP-204ENST00000447182 ZNF488Q96MN9 340 aa16.21■□□□□ 0.19
SDCBP-204ENST00000447182 PHOX2AO14813 284 aa16.21■□□□□ 0.18
SDCBP-204ENST00000447182 ZNHIT1O43257 154 aa16.21■□□□□ 0.18
SDCBP-204ENST00000447182 CFIP05156 583 aa16.21■□□□□ 0.18
SDCBP-204ENST00000447182 TRGC1P0CF51 173 aa16.21■□□□□ 0.18
SDCBP-204ENST00000447182 HIST1H1BP16401 226 aaKnown RBP16.21■□□□□ 0.18
SDCBP-204ENST00000447182 HOXA6P31267 233 aa16.21■□□□□ 0.18
SDCBP-204ENST00000447182 LHX2P50458 406 aa16.21■□□□□ 0.18
SDCBP-204ENST00000447182 OR2T2Q6IF00 324 aa16.21■□□□□ 0.18
SDCBP-204ENST00000447182 LCN15Q6UWW0 184 aa16.21■□□□□ 0.18
SDCBP-204ENST00000447182 HAPLN4Q86UW8 402 aa16.21■□□□□ 0.18
SDCBP-204ENST00000447182 FRZBQ92765 325 aa16.21■□□□□ 0.18
SDCBP-204ENST00000447182 PINX1Q96BK5 328 aaKnown RBP16.21■□□□□ 0.18
SDCBP-204ENST00000447182 PFDN5Q99471 154 aa16.21■□□□□ 0.18
SDCBP-204ENST00000447182 PKIBQ9C010 78 aa16.21■□□□□ 0.18
SDCBP-204ENST00000447182 CTDSP1Q9GZU7 261 aa16.21■□□□□ 0.18
SDCBP-204ENST00000447182 VAX2Q9UIW0 290 aa16.21■□□□□ 0.18
SDCBP-204ENST00000447182 B4E171 279 aa16.2■□□□□ 0.18
SDCBP-204ENST00000447182 IGKV1-5P01602 117 aa16.2■□□□□ 0.18
SDCBP-204ENST00000447182 OPN1MWP04001 364 aa16.2■□□□□ 0.18
SDCBP-204ENST00000447182 METTL15P1P0C7V9 234 aa16.2■□□□□ 0.18
SDCBP-204ENST00000447182 OPN1MW2P0DN77 364 aa16.2■□□□□ 0.18
SDCBP-204ENST00000447182 OPN1MW3P0DN78 364 aa16.2■□□□□ 0.18
SDCBP-204ENST00000447182 TSPAN7P41732 249 aa16.2■□□□□ 0.18
SDCBP-204ENST00000447182 FOXG1P55316 489 aaPredicted RBP16.2■□□□□ 0.18
SDCBP-204ENST00000447182 TMEM41BQ5BJD5 291 aa16.2■□□□□ 0.18
SDCBP-204ENST00000447182 MOB1BQ7L9L4 216 aa16.2■□□□□ 0.18
SDCBP-204ENST00000447182 SSX7Q7RTT5 188 aa16.2■□□□□ 0.18
SDCBP-204ENST00000447182 TUSC5Q8IXB3 177 aa16.2■□□□□ 0.18
SDCBP-204ENST00000447182 GPR61Q9BZJ8 451 aa16.2■□□□□ 0.18
SDCBP-204ENST00000447182 ANKRD30BLA7E2S9 258 aa16.19■□□□□ 0.18
SDCBP-204ENST00000447182 IAPPP10997 89 aa16.19■□□□□ 0.18
SDCBP-204ENST00000447182 CLDN18P56856 261 aa16.19■□□□□ 0.18
SDCBP-204ENST00000447182 SSPNQ14714 243 aa16.19■□□□□ 0.18
SDCBP-204ENST00000447182 TESK1Q15569 626 aa16.19■□□□□ 0.18
SDCBP-204ENST00000447182 GFI1BQ5VTD9 330 aa16.19■□□□□ 0.18
SDCBP-204ENST00000447182 CDPF1Q6NVV7 123 aa16.19■□□□□ 0.18
SDCBP-204ENST00000447182 STRADBQ9C0K7 418 aa16.19■□□□□ 0.18
SDCBP-204ENST00000447182 PRDM13Q9H4Q3 707 aa16.19■□□□□ 0.18
SDCBP-204ENST00000447182 OR1A1Q9P1Q5 309 aa16.19■□□□□ 0.18
SDCBP-204ENST00000447182 OR5H1A6NKK0 313 aa16.19■□□□□ 0.18
SDCBP-204ENST00000447182 WDR61Q9GZS3 305 aaKnown RBP16.19■□□□□ 0.18
SDCBP-204ENST00000447182 LIN7CQ9NUP9 197 aaKnown RBP16.19■□□□□ 0.18
SDCBP-204ENST00000447182 LRFN1Q9P244 771 aa16.19■□□□□ 0.18
SDCBP-204ENST00000447182 IFNA1P01562 189 aa16.18■□□□□ 0.18
SDCBP-204ENST00000447182 APLNRP35414 380 aa16.18■□□□□ 0.18
SDCBP-204ENST00000447182 ZNF585BQ52M93 769 aa16.18■□□□□ 0.18
SDCBP-204ENST00000447182 C9orf152Q5JTZ5 239 aa16.18■□□□□ 0.18
SDCBP-204ENST00000447182 Q6P435 159 aa16.18■□□□□ 0.18
SDCBP-204ENST00000447182 C17orf78Q8N4C9 275 aa16.18■□□□□ 0.18
SDCBP-204ENST00000447182 IL1F10Q8WWZ1 152 aa16.18■□□□□ 0.18
SDCBP-204ENST00000447182 ZNF703Q9H7S9 590 aaPredicted RBP16.18■□□□□ 0.18
SDCBP-204ENST00000447182 FAM90A26D6RGX4 464 aa16.18■□□□□ 0.18
SDCBP-204ENST00000447182 FGF8P55075 233 aaPredicted RBP16.18■□□□□ 0.18
SDCBP-204ENST00000447182 PLP2Q04941 152 aa16.18■□□□□ 0.18
SDCBP-204ENST00000447182 SRYQ05066 204 aa16.18■□□□□ 0.18
SDCBP-204ENST00000447182 WDR25Q64LD2 544 aaPredicted RBP16.18■□□□□ 0.18
SDCBP-204ENST00000447182 FAM173AQ9BQD7 235 aa16.18■□□□□ 0.18
SDCBP-204ENST00000447182 AGMATQ9BSE5 352 aa16.18■□□□□ 0.18
SDCBP-204ENST00000447182 OR51I2Q9H344 312 aa16.18■□□□□ 0.18
SDCBP-204ENST00000447182 DOCK10Q96BY6 2186 aa16.18■□□□□ 0.18
SDCBP-204ENST00000447182 LILRA1O75019 489 aa16.17■□□□□ 0.18
SDCBP-204ENST00000447182 SYNGR4O95473 234 aa16.17■□□□□ 0.18
SDCBP-204ENST00000447182 RD3LP0DJH9 198 aa16.17■□□□□ 0.18
SDCBP-204ENST00000447182 SPINK14Q6IE38 97 aa16.17■□□□□ 0.18
SDCBP-204ENST00000447182 LILRB2Q8N423 598 aa16.17■□□□□ 0.18
SDCBP-204ENST00000447182 OR2M7Q8NG81 312 aa16.17■□□□□ 0.18
SDCBP-204ENST00000447182 CDH20Q9HBT6 801 aa16.17■□□□□ 0.18
SDCBP-204ENST00000447182 TMEM9BQ9NQ34 198 aa16.17■□□□□ 0.18
SDCBP-204ENST00000447182 GFOD1Q9NXC2 390 aa16.17■□□□□ 0.18
SDCBP-204ENST00000447182 TIMM9Q9Y5J7 89 aa16.17■□□□□ 0.18
SDCBP-204ENST00000447182 PCSK5Q92824 1860 aa16.17■□□□□ 0.18
SDCBP-204ENST00000447182 MAP1LC3B2A6NCE7 125 aa16.16■□□□□ 0.18
SDCBP-204ENST00000447182 APH1AQ96BI3 265 aa16.16■□□□□ 0.18
SDCBP-204ENST00000447182 OR4C12Q96R67 309 aa16.16■□□□□ 0.18
SDCBP-204ENST00000447182 IER2Q9BTL4 223 aa16.16■□□□□ 0.18
SDCBP-204ENST00000447182 MAP1LC3BQ9GZQ8 125 aa16.16■□□□□ 0.18
SDCBP-204ENST00000447182 PPP1R3CQ9UQK1 317 aa16.16■□□□□ 0.18
SDCBP-204ENST00000447182 ARGFXA6NJG6 315 aa16.16■□□□□ 0.18
SDCBP-204ENST00000447182 CEBPZOSA8MTT3 80 aa16.16■□□□□ 0.18
SDCBP-204ENST00000447182 J3QT63 122 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms