RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 FAM90A10PA6NDY2 464 aa14.29□□□□□ -0.12
COL9A1-205ENST00000447041 FAM90A7PA6NKC0 464 aa14.29□□□□□ -0.12
COL9A1-205ENST00000447041 FAM90A23PA8MXZ1 464 aa14.29□□□□□ -0.12
COL9A1-205ENST00000447041 TXNL1O43396 289 aa14.29□□□□□ -0.12
COL9A1-205ENST00000447041 INSL4Q14641 139 aa14.29□□□□□ -0.12
COL9A1-205ENST00000447041 DEFB136Q30KP8 78 aa14.29□□□□□ -0.12
COL9A1-205ENST00000447041 TMEM30BQ3MIR4 351 aa14.29□□□□□ -0.12
COL9A1-205ENST00000447041 C11orf87Q6NUJ2 197 aa14.29□□□□□ -0.12
COL9A1-205ENST00000447041 TRAT1Q6PIZ9 186 aa14.29□□□□□ -0.12
COL9A1-205ENST00000447041 FAM71E2Q8N5Q1 922 aa14.29□□□□□ -0.12
COL9A1-205ENST00000447041 NKAIN3Q8N8D7 197 aa14.29□□□□□ -0.12
COL9A1-205ENST00000447041 BPIFB6Q8NFQ5 453 aa14.29□□□□□ -0.12
COL9A1-205ENST00000447041 FBLIM1Q8WUP2 373 aa14.29□□□□□ -0.12
COL9A1-205ENST00000447041 RAX2Q96IS3 184 aa14.29□□□□□ -0.12
COL9A1-205ENST00000447041 RASL11BQ9BPW5 248 aa14.29□□□□□ -0.12
COL9A1-205ENST00000447041 GPR61Q9BZJ8 451 aa14.29□□□□□ -0.12
COL9A1-205ENST00000447041 TAF9BQ9HBM6 251 aa14.29□□□□□ -0.12
COL9A1-205ENST00000447041 RAB9BQ9NP90 201 aa14.29□□□□□ -0.12
COL9A1-205ENST00000447041 CD1AP06126 327 aa14.28□□□□□ -0.12
COL9A1-205ENST00000447041 FUT3P21217 361 aa14.28□□□□□ -0.12
COL9A1-205ENST00000447041 GPR50Q13585 617 aa14.28□□□□□ -0.12
COL9A1-205ENST00000447041 PNLIPRP3Q17RR3 467 aa14.28□□□□□ -0.12
COL9A1-205ENST00000447041 NANOGP1Q8N7R0 232 aa14.28□□□□□ -0.12
COL9A1-205ENST00000447041 MRPL30Q8TCC3 161 aaKnown RBP14.28□□□□□ -0.12
COL9A1-205ENST00000447041 UQCC2Q9BRT2 126 aa14.28□□□□□ -0.12
COL9A1-205ENST00000447041 MCRIP2Q9BUT9 160 aaKnown RBP14.28□□□□□ -0.12
COL9A1-205ENST00000447041 DCLRE1BQ9H816 532 aa14.28□□□□□ -0.12
COL9A1-205ENST00000447041 OR2S2Q9NQN1 319 aa14.28□□□□□ -0.12
COL9A1-205ENST00000447041 MBNL3Q9NUK0 354 aaKnown RBP14.28□□□□□ -0.12
COL9A1-205ENST00000447041 H0YHG0 523 aa14.27□□□□□ -0.13
COL9A1-205ENST00000447041 PDCD6O75340 191 aa14.27□□□□□ -0.13
COL9A1-205ENST00000447041 CA11O75493 328 aa14.27□□□□□ -0.13
COL9A1-205ENST00000447041 MAPK3P27361 379 aaPredicted RBP14.27□□□□□ -0.13
COL9A1-205ENST00000447041 GP2P55259 537 aaKnown RBP14.27□□□□□ -0.13
COL9A1-205ENST00000447041 RAB25P57735 213 aa14.27□□□□□ -0.13
COL9A1-205ENST00000447041 CFHR3Q02985 330 aa14.27□□□□□ -0.13
COL9A1-205ENST00000447041 LSAMPQ13449 338 aa14.27□□□□□ -0.13
COL9A1-205ENST00000447041 MORN2Q502X0 79 aa14.27□□□□□ -0.13
COL9A1-205ENST00000447041 NKAPLQ5M9Q1 402 aa14.27□□□□□ -0.13
COL9A1-205ENST00000447041 FAM27D1Q5T7N8 215 aa14.27□□□□□ -0.13
COL9A1-205ENST00000447041 OGFRL1Q5TC84 451 aaPredicted RBP14.27□□□□□ -0.13
COL9A1-205ENST00000447041 OR8H1Q8NGG4 311 aa14.27□□□□□ -0.13
COL9A1-205ENST00000447041 OR52L2PQ8NGH6 319 aa14.27□□□□□ -0.13
COL9A1-205ENST00000447041 PLCXD1Q9NUJ7 323 aa14.27□□□□□ -0.13
COL9A1-205ENST00000447041 FKBP14Q9NWM8 211 aa14.27□□□□□ -0.13
COL9A1-205ENST00000447041 CCL24O00175 119 aa14.26□□□□□ -0.13
COL9A1-205ENST00000447041 LANCL1O43813 399 aa14.26□□□□□ -0.13
COL9A1-205ENST00000447041 RRP9O43818 475 aaKnown RBP14.26□□□□□ -0.13
COL9A1-205ENST00000447041 GLAP06280 429 aa14.26□□□□□ -0.13
COL9A1-205ENST00000447041 SLC2A2P11168 524 aaPredicted RBP14.26□□□□□ -0.13
COL9A1-205ENST00000447041 MYF6P23409 242 aa14.26□□□□□ -0.13
COL9A1-205ENST00000447041 SOX6P35712 828 aa14.26□□□□□ -0.13
COL9A1-205ENST00000447041 PPP1CCP36873 323 aaKnown RBP14.26□□□□□ -0.13
COL9A1-205ENST00000447041 FOXE3Q13461 319 aa14.26□□□□□ -0.13
COL9A1-205ENST00000447041 CXorf66Q5JRM2 361 aaPredicted RBP14.26□□□□□ -0.13
COL9A1-205ENST00000447041 C6orf141Q5SZD1 244 aa14.26□□□□□ -0.13
COL9A1-205ENST00000447041 OR10K2Q6IF99 312 aa14.26□□□□□ -0.13
COL9A1-205ENST00000447041 ODF3L1Q8IXM7 274 aa14.26□□□□□ -0.13
COL9A1-205ENST00000447041 ABHD14AQ9BUJ0 271 aa14.26□□□□□ -0.13
COL9A1-205ENST00000447041 GON7Q9BXV9 100 aa14.26□□□□□ -0.13
COL9A1-205ENST00000447041 KCNK15Q9H427 330 aa14.26□□□□□ -0.13
COL9A1-205ENST00000447041 JPT1Q9UK76 154 aa14.26□□□□□ -0.13
COL9A1-205ENST00000447041 COL7A1Q02388 2944 aa14.26□□□□□ -0.13
COL9A1-205ENST00000447041 CASQ2O14958 399 aaPredicted RBP14.25□□□□□ -0.13
COL9A1-205ENST00000447041 VDAC1P21796 283 aa14.25□□□□□ -0.13
COL9A1-205ENST00000447041 GABPB1Q06547 395 aaPredicted RBP14.25□□□□□ -0.13
COL9A1-205ENST00000447041 MMDQ15546 238 aa14.25□□□□□ -0.13
COL9A1-205ENST00000447041 VAX1Q5SQQ9 334 aa14.25□□□□□ -0.13
COL9A1-205ENST00000447041 RNF152Q8N8N0 203 aa14.25□□□□□ -0.13
COL9A1-205ENST00000447041 OR8U1Q8NH10 309 aa14.25□□□□□ -0.13
COL9A1-205ENST00000447041 THRSPQ92748 146 aa14.25□□□□□ -0.13
COL9A1-205ENST00000447041 SULT4A1Q9BR01 284 aa14.25□□□□□ -0.13
COL9A1-205ENST00000447041 MRPL20Q9BYC9 149 aaKnown RBP14.25□□□□□ -0.13
COL9A1-205ENST00000447041 CST11Q9H112 138 aa14.25□□□□□ -0.13
COL9A1-205ENST00000447041 KCNIP1Q9NZI2 227 aa14.25□□□□□ -0.13
COL9A1-205ENST00000447041 GHRLQ9UBU3 117 aa14.25□□□□□ -0.13
COL9A1-205ENST00000447041 ERGIC3Q9Y282 383 aa14.25□□□□□ -0.13
COL9A1-205ENST00000447041 IGHG4P01861 327 aa14.24□□□□□ -0.13
COL9A1-205ENST00000447041 ELANEP08246 267 aa14.24□□□□□ -0.13
COL9A1-205ENST00000447041 VSIG8P0DPA2 414 aa14.24□□□□□ -0.13
COL9A1-205ENST00000447041 CNTFRP26992 372 aa14.24□□□□□ -0.13
COL9A1-205ENST00000447041 CHATP28329 748 aa14.24□□□□□ -0.13
COL9A1-205ENST00000447041 CDX1P47902 265 aaPredicted RBP14.24□□□□□ -0.13
COL9A1-205ENST00000447041 ACSM3Q53FZ2 586 aa14.24□□□□□ -0.13
COL9A1-205ENST00000447041 RBM48Q5RL73 367 aaKnown RBP14.24□□□□□ -0.13
COL9A1-205ENST00000447041 STEAP3Q658P3 488 aa14.24□□□□□ -0.13
COL9A1-205ENST00000447041 LRRTM1Q86UE6 522 aa14.24□□□□□ -0.13
COL9A1-205ENST00000447041 RITA1Q96K30 269 aa14.24□□□□□ -0.13
COL9A1-205ENST00000447041 TMED9Q9BVK6 235 aa14.24□□□□□ -0.13
COL9A1-205ENST00000447041 ZNF107Q9UII5 783 aaPredicted RBP14.24□□□□□ -0.13
COL9A1-205ENST00000447041 IGF1P05019 195 aa14.23□□□□□ -0.13
COL9A1-205ENST00000447041 CDK1P06493 297 aa14.23□□□□□ -0.13
COL9A1-205ENST00000447041 LUMP51884 338 aaPredicted RBP14.23□□□□□ -0.13
COL9A1-205ENST00000447041 HTD2P86397 168 aa14.23□□□□□ -0.13
COL9A1-205ENST00000447041 CD69Q07108 199 aa14.23□□□□□ -0.13
COL9A1-205ENST00000447041 UNQ9370/PRO34162Q6UXP9 181 aa14.23□□□□□ -0.13
COL9A1-205ENST00000447041 C6orf201Q7Z4U5 140 aa14.23□□□□□ -0.13
COL9A1-205ENST00000447041 ZNF554Q86TJ5 538 aa14.23□□□□□ -0.13
COL9A1-205ENST00000447041 KCTD7Q96MP8 289 aa14.23□□□□□ -0.13
COL9A1-205ENST00000447041 NABP2Q9BQ15 211 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms