RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 SESN1Q9Y6P5 492 aa14.07□□□□□ -0.16
LIME1-202ENST00000444951 TENM1Q9UKZ4 2725 aa14.06□□□□□ -0.16
LIME1-202ENST00000444951 NPIPB11E5RHQ5 1161 aa14.06□□□□□ -0.16
LIME1-202ENST00000444951 GABARAPH6UMI1 98 aa14.06□□□□□ -0.16
LIME1-202ENST00000444951 SULT1C2O00338 296 aa14.06□□□□□ -0.16
LIME1-202ENST00000444951 RBBP9O75884 186 aa14.06□□□□□ -0.16
LIME1-202ENST00000444951 FPR2P25090 351 aa14.06□□□□□ -0.16
LIME1-202ENST00000444951 SRP14P37108 136 aaKnown RBP14.06□□□□□ -0.16
LIME1-202ENST00000444951 ETV6P41212 452 aa14.06□□□□□ -0.16
LIME1-202ENST00000444951 GNG10P50151 68 aa14.06□□□□□ -0.16
LIME1-202ENST00000444951 GNMTQ14749 295 aa14.06□□□□□ -0.16
LIME1-202ENST00000444951 IGSF11Q5DX21 431 aa14.06□□□□□ -0.16
LIME1-202ENST00000444951 MFSD4AQ8N468 514 aa14.06□□□□□ -0.16
LIME1-202ENST00000444951 PNKDQ8N490 385 aa14.06□□□□□ -0.16
LIME1-202ENST00000444951 SMIM4Q8WVI0 70 aa14.06□□□□□ -0.16
LIME1-202ENST00000444951 SNAPC3Q92966 411 aa14.06□□□□□ -0.16
LIME1-202ENST00000444951 DMRTB1Q96MA1 342 aa14.06□□□□□ -0.16
LIME1-202ENST00000444951 AKIP1Q9NQ31 210 aa14.06□□□□□ -0.16
LIME1-202ENST00000444951 OR2S2Q9NQN1 319 aa14.06□□□□□ -0.16
LIME1-202ENST00000444951 SLC23A1Q9UHI7 598 aa14.06□□□□□ -0.16
LIME1-202ENST00000444951 POM121CA8CG34 1229 aa14.05□□□□□ -0.16
LIME1-202ENST00000444951 CTDSPLO15194 276 aa14.05□□□□□ -0.16
LIME1-202ENST00000444951 HSPA12AO43301 675 aa14.05□□□□□ -0.16
LIME1-202ENST00000444951 TCF21O43680 179 aa14.05□□□□□ -0.16
LIME1-202ENST00000444951 RBP4P02753 201 aa14.05□□□□□ -0.16
LIME1-202ENST00000444951 PRTN3P24158 256 aa14.05□□□□□ -0.16
LIME1-202ENST00000444951 HLA-DMAP28067 261 aa14.05□□□□□ -0.16
LIME1-202ENST00000444951 RCVRNP35243 200 aa14.05□□□□□ -0.16
LIME1-202ENST00000444951 PPP1CCP36873 323 aaKnown RBP14.05□□□□□ -0.16
LIME1-202ENST00000444951 MRPS10P82664 201 aaKnown RBP14.05□□□□□ -0.16
LIME1-202ENST00000444951 C1orf229Q6ZS94 237 aaPredicted RBP14.05□□□□□ -0.16
LIME1-202ENST00000444951 C1orf122Q6ZSJ8 110 aa14.05□□□□□ -0.16
LIME1-202ENST00000444951 ZNF554Q86TJ5 538 aa14.05□□□□□ -0.16
LIME1-202ENST00000444951 Q8N402 240 aa14.05□□□□□ -0.16
LIME1-202ENST00000444951 OR4A4PQ8NGN8 299 aa14.05□□□□□ -0.16
LIME1-202ENST00000444951 TMEM133Q9H2Q1 129 aa14.05□□□□□ -0.16
LIME1-202ENST00000444951 HEXA-AS1Q9H8Q6 139 aa14.05□□□□□ -0.16
LIME1-202ENST00000444951 OR1A1Q9P1Q5 309 aa14.05□□□□□ -0.16
LIME1-202ENST00000444951 MTFP1Q9UDX5 166 aa14.05□□□□□ -0.16
LIME1-202ENST00000444951 ANXA10Q9UJ72 324 aa14.05□□□□□ -0.16
LIME1-202ENST00000444951 TRAV40A0A0B4J280 105 aa14.04□□□□□ -0.16
LIME1-202ENST00000444951 IGKV1-6A0A0C4DH72 117 aa14.04□□□□□ -0.16
LIME1-202ENST00000444951 A0A1W2PPE3 182 aa14.04□□□□□ -0.16
LIME1-202ENST00000444951 RNASEK-C17orf49H0YIS7 233 aa14.04□□□□□ -0.16
LIME1-202ENST00000444951 HAX1O00165 279 aa14.04□□□□□ -0.16
LIME1-202ENST00000444951 F2RL2O00254 374 aa14.04□□□□□ -0.16
LIME1-202ENST00000444951 LANCL1O43813 399 aa14.04□□□□□ -0.16
LIME1-202ENST00000444951 VENTXO95231 258 aa14.04□□□□□ -0.16
LIME1-202ENST00000444951 PMP2P02689 132 aa14.04□□□□□ -0.16
LIME1-202ENST00000444951 PTBP1P26599 531 aaKnown RBP eCLIP14.04□□□□□ -0.16
LIME1-202ENST00000444951 ACTBP60709 375 aa14.04□□□□□ -0.16
LIME1-202ENST00000444951 ACTG1P63261 375 aa14.04□□□□□ -0.16
LIME1-202ENST00000444951 ZNF45Q02386 682 aa14.04□□□□□ -0.16
LIME1-202ENST00000444951 HERPUD1Q15011 391 aa14.04□□□□□ -0.16
LIME1-202ENST00000444951 SRSF7Q16629 238 aaKnown RBP eCLIP14.04□□□□□ -0.16
LIME1-202ENST00000444951 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.04□□□□□ -0.16
LIME1-202ENST00000444951 OR13D1Q8NGV5 346 aa14.04□□□□□ -0.16
LIME1-202ENST00000444951 S100ZQ8WXG8 99 aa14.04□□□□□ -0.16
LIME1-202ENST00000444951 GINS4Q9BRT9 223 aa14.04□□□□□ -0.16
LIME1-202ENST00000444951 THAP7Q9BT49 309 aaPredicted RBP14.04□□□□□ -0.16
LIME1-202ENST00000444951 SRRQ9GZT4 340 aa14.04□□□□□ -0.16
LIME1-202ENST00000444951 LINC00574Q9H8X3 128 aa14.04□□□□□ -0.16
LIME1-202ENST00000444951 GFOD1Q9NXC2 390 aa14.04□□□□□ -0.16
LIME1-202ENST00000444951 GSTZ1O43708 216 aaPredicted RBP14.03□□□□□ -0.16
LIME1-202ENST00000444951 IGHV4-38-2P0DP08 117 aa14.03□□□□□ -0.16
LIME1-202ENST00000444951 CEACAM6P40199 344 aa14.03□□□□□ -0.16
LIME1-202ENST00000444951 OR3A3P47888 321 aa14.03□□□□□ -0.16
LIME1-202ENST00000444951 LOXL3P58215 753 aa14.03□□□□□ -0.16
LIME1-202ENST00000444951 NCR3LG1Q68D85 454 aa14.03□□□□□ -0.16
LIME1-202ENST00000444951 Q6ZS49 121 aa14.03□□□□□ -0.16
LIME1-202ENST00000444951 LINC00299Q6ZSB3 139 aa14.03□□□□□ -0.16
LIME1-202ENST00000444951 LYSMD2Q8IV50 215 aa14.03□□□□□ -0.16
LIME1-202ENST00000444951 ABHD12Q8N2K0 398 aa14.03□□□□□ -0.16
LIME1-202ENST00000444951 OR10A7Q8NGE5 316 aa14.03□□□□□ -0.16
LIME1-202ENST00000444951 OR5H2Q8NGV7 314 aa14.03□□□□□ -0.16
LIME1-202ENST00000444951 OR10J5Q8NHC4 309 aa14.03□□□□□ -0.16
LIME1-202ENST00000444951 TNFRSF14Q92956 283 aa14.03□□□□□ -0.16
LIME1-202ENST00000444951 UPRTQ96BW1 309 aa14.03□□□□□ -0.16
LIME1-202ENST00000444951 ANAPC10Q9UM13 185 aa14.03□□□□□ -0.16
LIME1-202ENST00000444951 WNK2Q9Y3S1 2297 aa14.02□□□□□ -0.16
LIME1-202ENST00000444951 IGHV2-26A0A0B4J1V2 119 aa14.02□□□□□ -0.17
LIME1-202ENST00000444951 CENPVL3A0A0U1RRI6 287 aa14.02□□□□□ -0.17
LIME1-202ENST00000444951 J3QRK9 145 aa14.02□□□□□ -0.17
LIME1-202ENST00000444951 M0QYG6 137 aa14.02□□□□□ -0.17
LIME1-202ENST00000444951 TOR1AO14656 332 aa14.02□□□□□ -0.17
LIME1-202ENST00000444951 ZBTB25P24278 435 aa14.02□□□□□ -0.17
LIME1-202ENST00000444951 RFX2P48378 723 aa14.02□□□□□ -0.17
LIME1-202ENST00000444951 HTD2P86397 168 aa14.02□□□□□ -0.17
LIME1-202ENST00000444951 ZNF846Q147U1 533 aa14.02□□□□□ -0.17
LIME1-202ENST00000444951 GPR157Q5UAW9 335 aa14.02□□□□□ -0.17
LIME1-202ENST00000444951 RUSC1-AS1Q66K80 236 aa14.02□□□□□ -0.17
LIME1-202ENST00000444951 HCP5Q6MZN7 132 aa14.02□□□□□ -0.17
LIME1-202ENST00000444951 OR5AP2Q8NGF4 316 aa14.02□□□□□ -0.17
LIME1-202ENST00000444951 CLEC7AQ9BXN2 247 aa14.02□□□□□ -0.17
LIME1-202ENST00000444951 PARP12Q9H0J9 701 aaKnown RBP14.02□□□□□ -0.17
LIME1-202ENST00000444951 NECAP2Q9NVZ3 263 aa14.02□□□□□ -0.17
LIME1-202ENST00000444951 EHFQ9NZC4 300 aa14.02□□□□□ -0.17
LIME1-202ENST00000444951 ZNRD1Q9P1U0 126 aa14.02□□□□□ -0.17
LIME1-202ENST00000444951 ZNF69Q9UC07 566 aa14.02□□□□□ -0.17
LIME1-202ENST00000444951 JPT1Q9UK76 154 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms